Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46599 | Canola | cytosol | 53.45 | 40.39 |
| CDY61325 | Canola | cytosol | 53.02 | 32.98 |
| Bra005485.1-P | Field mustard | nucleus | 50.43 | 31.28 |
| CDY23726 | Canola | nucleus | 39.22 | 29.07 |
| AT2G33560.2 | Thale cress | nucleus | 49.57 | 29.04 |
| CDX95868 | Canola | cytosol | 16.38 | 26.57 |
| VIT_18s0122g00470.t01 | Wine grape | nucleus | 33.62 | 20.47 |
| Solyc04g082900.2.1 | Tomato | nucleus | 32.33 | 19.28 |
| Zm00001d015863_P001 | Maize | cytosol | 31.47 | 18.86 |
| KRG89179 | Soybean | cytosol | 30.6 | 18.49 |
| KRH49504 | Soybean | cytoskeleton, cytosol, nucleus | 30.6 | 18.49 |
| PGSC0003DMT400025922 | Potato | cytosol | 30.6 | 18.35 |
| Os02t0193600-01 | Rice | nucleus | 31.47 | 18.34 |
| TraesCS6D01G157200.1 | Wheat | cytosol, nucleus, plastid | 28.45 | 16.75 |
| TraesCS6B01G195800.1 | Wheat | cytosol | 28.02 | 16.46 |
| TraesCS6A01G168100.1 | Wheat | nucleus | 28.02 | 16.33 |
| EES04683 | Sorghum | cytosol | 27.59 | 15.8 |
| HORVU6Hr1G034110.3 | Barley | nucleus | 26.72 | 15.12 |
| GSMUA_Achr1P16590_001 | Banana | nucleus | 26.72 | 14.52 |
| GSMUA_Achr3P11640_001 | Banana | endoplasmic reticulum | 27.16 | 13.79 |
| Bra009117.1-P | Field mustard | nucleus | 12.93 | 6.62 |
| Bra031135.1-P | Field mustard | cytosol | 12.93 | 6.32 |
Protein Annotations
| EnsemblPlants:Bra015240.1 | EnsemblPlants:Bra015240.1-P | EnsemblPlantsGene:Bra015240 | Gene3D:1.25.40.430 | UniParc:UPI0002544471 | UniProt:M4DFG7 |
| MapMan:35.1 | : | : | : | : | : |
Description
AT2G33560 (E=2e-071) | spindle checkpoint protein-related
Coordinates
chrA10:+:3047411..3048834
Molecular Weight (calculated)
25664.3 Da
IEP (calculated)
7.600
GRAVY (calculated)
-0.754
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYKGKVKTA NEIFNLGISR NAKPVEKLND AYKKFMEPKE NDLPSRSFGT VLSRGDNSNT GRQALGPQEK RTNLNHSSKA PLAVYKDTIT GDQTESDKSK
101: PEFGSWLMLG GRAEKNTENN ALPGKWAAFK VPQKPIVRTA ASSFEVFVDE EECTDSEGVE KRKKIETISP SSSNVLPLND GREIKKETEL TLGVQRIVED
201: PSVLVATYEG THNHLGPTLL KGMLQDKLDQ AL
101: PEFGSWLMLG GRAEKNTENN ALPGKWAAFK VPQKPIVRTA ASSFEVFVDE EECTDSEGVE KRKKIETISP SSSNVLPLND GREIKKETEL TLGVQRIVED
201: PSVLVATYEG THNHLGPTLL KGMLQDKLDQ AL
001: MAAETKVQVS DPEAEFLNSK QETGYEWELF KENVRPLKRG RNVGILNHAL KSHSDHQLRK NLIEKRRNLI EAIDEYEGDD PLSPWIECIK WVQEAFPPGG
101: ECSGLLVIYE QCVRKFWHSE RYKDDLRYLK VWLEYAEHCA DAEVIYKFLE VNEIGKTHAV YYIAYALHIE FKNKVKTANE IFNLGISRDA KPVEKLNDAY
201: KKFMVRTMRR SNTADEEPKE NNDLPSRSFG TLLSRGDNNA RRQALGSSNP QAKKLKPNQS SKTPFAIYAD AVSDTTSGNQ PESDKSRPEF GSWLMLGGRA
301: ERNKENNSLP RKWASFKVPQ KPIVRTVAAA SASTFEVFVD EEECTEEEEE KKKNDETISS SSNVLPLNGG REIKKETELL RQNPLRHFPP NSFLR
101: ECSGLLVIYE QCVRKFWHSE RYKDDLRYLK VWLEYAEHCA DAEVIYKFLE VNEIGKTHAV YYIAYALHIE FKNKVKTANE IFNLGISRDA KPVEKLNDAY
201: KKFMVRTMRR SNTADEEPKE NNDLPSRSFG TLLSRGDNNA RRQALGSSNP QAKKLKPNQS SKTPFAIYAD AVSDTTSGNQ PESDKSRPEF GSWLMLGGRA
301: ERNKENNSLP RKWASFKVPQ KPIVRTVAAA SASTFEVFVD EEECTEEEEE KKKNDETISS SSNVLPLNGG REIKKETELL RQNPLRHFPP NSFLR
Arabidopsis Description
BUBR1BUBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VU51]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.