Factsheet for Bra009117.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009117.1-P
Bra017340.1-P	cytoskeleton, nucleus
Bra025176.1-P	cytoskeleton, nucleus
Bra030221.1-P
Bra039922.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G05510.1	Bra030221.1-P	AT2G22640.1	25262777
AT5G05510.1	Bra039922.1-P	AT2G22640.1	25262777
AT5G05510.1	Bra017340.1-P	AT3G25980.1	25262777
AT5G05510.1	Bra025176.1-P	AT3G25980.1	25262777
AT5G05510.1	Bra017340.1-P	AT3G25980.1	25262777
AT5G05510.1	Bra025176.1-P	AT3G25980.1	25262777
AT5G05510.1	Bra009117.1-P	AT5G05510.1	25262777

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70146	Canola	nucleus	84.11	84.11
CDX98847	Canola	nucleus	80.13	81.21
AT5G05510.1	Thale cress	nucleus	78.37	75.37
KRH31175	Soybean	nucleus	56.73	48.86
KRG97697	Soybean	nucleus	54.53	47.32
GSMUA_Achr5P14270_001	Banana	cytosol	50.99	42.94
VIT_13s0067g01530.t01	Wine grape	nucleus	56.95	42.64
Solyc06g051040.2.1	Tomato	cytosol, nucleus, plastid	53.86	41.5
EES09179	Sorghum	nucleus	47.24	34.63
Os11t0128700-00	Rice	nucleus	46.8	34.14
Os12t0125300-01	Rice	nucleus	46.8	34.08
HORVU7Hr1G029580.3	Barley	nucleus	45.92	33.49
TraesCSU01G188700.1	Wheat	nucleus	44.81	32.74
TraesCS5A01G142400.1	Wheat	nucleus	44.81	32.74
HORVU5Hr1G045460.1	Barley	mitochondrion	45.92	32.15
Zm00001d023279_P001	Maize	nucleus	44.59	31.56
TraesCS5B01G141100.1	Wheat	nucleus, plastid	44.81	30.76
TraesCS5D01G149700.1	Wheat	plastid	44.59	30.65
EES16550	Sorghum	mitochondrion, nucleus	47.02	29.75
Bra005485.1-P	Field mustard	nucleus	14.13	17.11
Bra015240.1-P	Field mustard	nucleus	6.62	12.93
Bra031135.1-P	Field mustard	cytosol	12.58	12.0

Protein Annotations

EnsemblPlants:Bra009117.1	EnsemblPlants:Bra009117.1-P	EnsemblPlantsGene:Bra009117	Gene3D:1.25.40.430	GO:GO:0007049	GO:GO:0007094
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:Bub1/Mad3	InterPro:IPR013212	InterPro:Mad3/Bub1_I
ncoils:Coil	PANTHER:PTHR14030	PANTHER:PTHR14030:SF2	PFAM:PF08311	PFscan:PS51489	SEG:seg
SMART:SM00777	UniParc:UPI0002544C45	UniProt:M4CY20	MapMan:13.3.5.5.5	:	:

Description

AT5G05510 (E=1e-091) | protein kinase-related

Coordinates

chrA10:-:15303768..15305663

Molecular Weight (calculated)

52228.4 Da

IEP (calculated)

5.186

GRAVY (calculated)

-0.897

Length

453 amino acids

Sequence
(BLAST)

001: MAKNESGYES LLASLIVDIK SYSGKDHLLP WIRGIKKMKE SLPPQILNEK LPRFLQKCAQ SFESDKRYRN DSRYIRVWLQ LMDFVDDPKA LLRTMEANSI
101: GTKRSLFYQA YALHYEKLKR FEDAEKMYRL GVQNLAEPMD ELQKSYLQFL SRMERHKRKK TQRQELKVSE KHQKAERSQK EPRLASKDDT PVLNFVDKAI
201: VGKPEAENAC HHGLVDPTIN MKEAMNAINS MFKEPIETAP LQRKSQQRSQ DKENQGGFEV FVDKNQGSFE IFVDDENDDE TTDENDESGK GFVFLQPRDH
301: SPESSEEADR NNSPPRARFR EDTVVRRFVG STISEEPAVE NVCHHGLVDP TVNLKEAMED INNMFGEPID FVRPNRSKNK GKAVVQEKKP DAAAGFSILE
401: DDDDEAEEEH QETNGVTQIS PRKENERDLF EPTVCTKVAL DEINKLFAMP MDF

Best Arabidopsis Sequence Match ( AT5G05510.1 )
(BLAST)

001: MAKNENGYEN LLASLIVDIK SYSGKDHLLP WIRGVKKMKE SLPSQILNEK LPRFLQKCAE SFESDKRYKN DSRYIRVWLQ LMDFVDDPRA LLRTMEAKSI
101: GTKRSLFYQA YALHYEKMKR FEDAEKMYRL GVQNLAEPMD ELQKSYLQFV TRMERHKKKK TQRQEQKLSG KHHKVDERQQ HEPVLNFVDK AIVGKPEAEN
201: ACHHGLVDPT INMKEAMNTI NNMFKEPIET APLQRRSRQR SQNKENQGCN NSFEVFLDEN LECETGTSGK AKTSTTQCGS QPNQESFEIF IDDENTDETA
301: DENDEAGKAF VFLLPRDHSP ESSEEADRNT PPRARFREDT VVRRFVGSTI SDEPEAVENA CHHGLVDPTV NLKEAMEDIN NMFGEPINFV RPNRSKNKGK
401: AVVETKPNPA AGFSILEDDD EEEAEQEHQG KSQPTQRLPS KSDERELFEP TVCTKVALDE INKLFAMPMD F

Arabidopsis Description

At5g05510 [Source:UniProtKB/TrEMBL;Acc:Q9FFG4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.