Factsheet for Os11t0128700-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0829900-01
Os04t0486500-01	cytoskeleton, nucleus
Os11t0128700-00
Os12t0125300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G05510.1	Os02t0829900-01	AT2G22640.1	25262777
AT5G05510.1	Os04t0486500-01	AT3G25980.1	25262777
AT5G05510.1	Os04t0486500-01	AT3G25980.1	25262777
AT5G05510.1	Os11t0128700-00	AT5G05510.1	25262777
AT5G05510.1	Os12t0125300-01	AT5G05510.1	25262777

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0125300-01	Rice	nucleus	96.46	96.3
TraesCS5A01G142400.1	Wheat	nucleus	67.31	67.42
HORVU7Hr1G029580.3	Barley	nucleus	66.83	66.83
TraesCSU01G188700.1	Wheat	nucleus	66.34	66.45
EES09179	Sorghum	nucleus	66.02	66.34
HORVU5Hr1G045460.1	Barley	mitochondrion	66.83	64.14
TraesCS5D01G149700.1	Wheat	plastid	66.67	62.82
TraesCS5B01G141100.1	Wheat	nucleus, plastid	66.34	62.42
Zm00001d023279_P001	Maize	nucleus	64.09	62.19
EES16550	Sorghum	mitochondrion, nucleus	66.67	57.82
Bra009117.1-P	Field mustard	nucleus	34.14	46.8
CDX70146	Canola	nucleus	33.66	46.14
GSMUA_Achr5P14270_001	Banana	cytosol	39.29	45.35
CDX98847	Canola	nucleus	32.53	45.19
AT5G05510.1	Thale cress	nucleus	33.01	43.52
KRH31175	Soybean	nucleus	34.3	40.49
KRG97697	Soybean	nucleus	33.98	40.42
Solyc06g051040.2.1	Tomato	cytosol, nucleus, plastid	35.27	37.24
VIT_13s0067g01530.t01	Wine grape	nucleus	35.1	36.03
Os02t0193600-01	Rice	nucleus	9.02	14.07
Os07t0508500-01	Rice	cytosol	9.5	10.54

Protein Annotations

Gene3D:1.25.40.430	MapMan:13.3.5.5.5	UniProt:A0A0N7KSD3	ProteinID:BAT12498.1	InterPro:Bub1/Mad3	ncoils:Coil
GO:GO:0000003	GO:GO:0000778	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049
GO:GO:0007094	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0051754	InterPro:IPR013212	InterPro:Mad3/Bub1_I	EnsemblPlantsGene:Os11g0128700
EnsemblPlants:Os11t0128700-00	PFAM:PF08311	PFscan:PS51489	PANTHER:PTHR14030	PANTHER:PTHR14030:SF14	SMART:SM00777
UniParc:UPI000393BB62	SEG:seg	:	:	:	:

Description

Mad3/BUB1 homology region 1 domain containing protein. (Os11t0128700-00)

Coordinates

chr11:-:1325587..1328972

Molecular Weight (calculated)

69900.4 Da

IEP (calculated)

7.228

GRAVY (calculated)

-0.840

Length

621 amino acids

Sequence
(BLAST)

001: MAAATEQHCG GGGGDKEKDL LSAVVGDIRS YSGSDPLRPW LRGMRKMEAA LPPATLRAKL PRFLQKCAQE FQDDARYRDD PRYLRVWIQL MDYVKDAKPL
101: LKKMEKNRIG LKRSAFYMAY ALYYEKHKRF EDAENMYRLG TQNLAEPVGE LQKAHEQFIR RMKLYKRRKS RVQQERMPNK VQSIATSKNE VEGQSRSCTE
201: PKSNPVQRSG SGSNPHLGFP HPLGRPLYRG TSGDTKSLSR HNSDDTVVVR FVGSALVGKS ETEDACHHGL VEPTINTKEA MDAISSMFLE PLEPETKLKR
301: RSNRDKPSFN QEASAFEIFV DEDEPNKSGP SKLQDKNMKQ DNPKLSQQAS AFEIFVDEDD PYCNNQKMVQ HRHFNKENTQ VNQKASGFEI FVDENEPHGN
401: GRNAMSHKST VCPPKPSRDS RQQANFDFQK PFVGGFAILP DDEDEQLEKN DNGVKINSGT MQLTDDNTSL CSRQTDSKIR CDDLHPAISG LREDTVFHRF
501: VGSAVVGEPK VENACHHGLV EPTVNLKEAM DDINNMFGIP LNFKGEKPKN KKTTTLSERK AAPLSGFSIL ADDEPGENPA AQVKPSNASK FECQSGLFEP
601: TITTRDVMAE INDMFGMPLD F

Best Arabidopsis Sequence Match ( AT5G05510.1 )
(BLAST)

001: MAKNENGYEN LLASLIVDIK SYSGKDHLLP WIRGVKKMKE SLPSQILNEK LPRFLQKCAE SFESDKRYKN DSRYIRVWLQ LMDFVDDPRA LLRTMEAKSI
101: GTKRSLFYQA YALHYEKMKR FEDAEKMYRL GVQNLAEPMD ELQKSYLQFV TRMERHKKKK TQRQEQKLSG KHHKVDERQQ HEPVLNFVDK AIVGKPEAEN
201: ACHHGLVDPT INMKEAMNTI NNMFKEPIET APLQRRSRQR SQNKENQGCN NSFEVFLDEN LECETGTSGK AKTSTTQCGS QPNQESFEIF IDDENTDETA
301: DENDEAGKAF VFLLPRDHSP ESSEEADRNT PPRARFREDT VVRRFVGSTI SDEPEAVENA CHHGLVDPTV NLKEAMEDIN NMFGEPINFV RPNRSKNKGK
401: AVVETKPNPA AGFSILEDDD EEEAEQEHQG KSQPTQRLPS KSDERELFEP TVCTKVALDE INKLFAMPMD F

Arabidopsis Description

At5g05510 [Source:UniProtKB/TrEMBL;Acc:Q9FFG4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.