CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17186	Canola	nucleus	94.34	92.91
Bra005485.1-P	Field mustard	nucleus	85.35	88.77
AT2G33560.2	Thale cress	nucleus	73.26	71.97
CDY46599	Canola	cytosol	52.44	66.45
CDY23726	Canola	nucleus	51.67	64.22
CDX95868	Canola	cytosol	22.36	60.84
VIT_18s0122g00470.t01	Wine grape	nucleus	55.53	56.69
PGSC0003DMT400025922	Potato	cytosol	56.3	56.59
KRH49504	Soybean	cytoskeleton, cytosol, nucleus	54.76	55.47
KRG89179	Soybean	cytosol	54.5	55.21
Solyc04g082900.2.1	Tomato	nucleus	55.01	55.01
CDY61325	Canola	cytosol	49.87	52.01
Zm00001d015863_P001	Maize	cytosol	46.79	47.03
Os02t0193600-01	Rice	nucleus	47.04	45.98
TraesCS6B01G195800.1	Wheat	cytosol	46.02	45.32
EES04683	Sorghum	cytosol	47.04	45.19
TraesCS6A01G168100.1	Wheat	nucleus	45.5	44.47
TraesCS6D01G157200.1	Wheat	cytosol, nucleus, plastid	44.99	44.42
GSMUA_Achr1P16590_001	Banana	nucleus	46.27	42.15
GSMUA_Achr3P11640_001	Banana	endoplasmic reticulum	45.24	38.51
HORVU6Hr1G034110.3	Barley	nucleus	38.82	36.83
CDX70146	Canola	nucleus	16.97	14.57
CDX98847	Canola	nucleus	16.45	14.32
CDX81974	Canola	cytosol	16.2	12.65
CDY13862	Canola	cytosol	16.2	12.63

Protein Annotations

EnsemblPlants:CDY27958	EnsemblPlantsGene:GSBRNA2T00038879001	Gene3D:1.25.40.430	GO:A0A078GTH7	GO:GO:0007049	GO:GO:0007094
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:Bub1/Mad3	InterPro:IPR013212	InterPro:Mad3/Bub1_I
PANTHER:PTHR14030	PANTHER:PTHR14030:SF4	PFAM:PF08311	PFscan:PS51489	ProteinID:CDY27958	ProteinID:CDY27958.1
SEG:seg	SMART:SM00777	UniParc:UPI0004EEFF2B	UniProt:A0A078GTH7	MapMan:13.3.5.5.5	:

Description

BnaCnng05430DBnaCnng05430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTH7]

Coordinates

chrLK032212:+:525672..527948

Molecular Weight (calculated)

44928.1 Da

IEP (calculated)

8.831

GRAVY (calculated)

-0.866

Length

389 amino acids

Sequence
(BLAST)

001: MAERRVEISD PESEFFASKQ ETGHEWELFK ENVRPLKRGR NVRLLNHALK SHTDHQLRKT LVEKRRKLIE EIDEYAGDDP LFPWIQCIKW VQEAFPPGGE
101: CSGLLVIYEQ CVRKFWHSQR YKDDLRYLKV WLEYAEHCAD AEVIYKFLEV NEIGKTHALY YIAYALHMEF KSKVKTANEI FNLGVSRNAK PVEKLNDAYK
201: KFMVRTMRRP KTADEEPKEN NDLPSRSFGT VLSRVDNNNA GRQALGPQAP KTKLNQSSKA PLSIYTDTTS GNQQQESDKS RPEYGSWLML GGRAERNKEN
301: NSLPGKWKTF KVPQKPIVRT PAASASSFEV FVDEEEECTE EGGEKKTKSE TISSSSNALP LNDGREIKKE TELLRQNPLR HFPPNSFLR

Best Arabidopsis Sequence Match ( AT2G33560.1 )
(BLAST)

001: MAAETKVQVS DPEAEFLNSK QETGYEWELF KENVRPLKRG RNVGILNHAL KSHSDHQLRK NLIEKRRNLI EAIDEYEGDD PLSPWIECIK WVQEAFPPGG
101: ECSGLLVIYE QCVRKFWHSE RYKDDLRYLK VWLEYAEHCA DAEVIYKFLE VNEIGKTHAV YYIAYALHIE FKNKVKTANE IFNLGISRDA KPVEKLNDAY
201: KKFMVRTMRR SNTADEEPKE NNDLPSRSFG TLLSRGDNNA RRQALGSSNP QAKKLKPNQS SKTPFAIYAD AVSDTTSGNQ PESDKSRPEF GSWLMLGGRA
301: ERNKENNSLP RKWASFKVPQ KPIVRTVAAA SASTFEVFVD EEECTEEEEE KKKNDETISS SSNVLPLNGG REIKKETELL RQNPLRHFPP NSFLR

Arabidopsis Description

BUBR1BUBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VU51]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.