CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25625	Soybean	cytosol	92.63	92.28
GSMUA_Achr10P...	Banana	nucleus	44.05	59.29
VIT_12s0028g03360.t01	Wine grape	nucleus	61.63	59.06
Solyc07g053820.2.1	Tomato	cytosol, nucleus, plastid	57.84	57.84
AT2G20635.1	Thale cress	cytosol	57.28	57.71
PGSC0003DMT400082809	Potato	cytosol, nucleus, plastid	57.47	57.69
CDY13862	Canola	cytosol	50.85	53.91
CDX81974	Canola	cytosol	49.72	52.81
Bra031135.1-P	Field mustard	cytosol	47.26	52.63
TraesCS2A01G226000.1	Wheat	plastid	48.39	46.38
Os07t0508500-01	Rice	cytosol	48.39	45.71
TraesCS2B01G249400.1	Wheat	plastid	47.64	45.65
Zm00001d021588_P002	Maize	cytosol, plastid	47.26	45.05
KXG36289	Sorghum	plastid	46.69	39.97
HORVU0Hr1G039990.19	Barley	cytosol, nucleus	20.98	37.0
KRG89179	Soybean	cytosol	12.29	16.93
KRH49504	Soybean	cytoskeleton, cytosol, nucleus	11.91	16.41
KRG97697	Soybean	nucleus	12.85	13.03
KRH31175	Soybean	nucleus	12.85	12.93

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.430	EntrezGene:100802272	MapMan:13.3.5.5.1	MapMan:18.4.9	EMBL:ACUP02004070
InterPro:Bub1/Mad3	EnsemblPlantsGene:GLYMA_06G290500	GO:GO:0000003	GO:GO:0000166	GO:GO:0000778	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0007094
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0051754	InterPro:IPR000719	InterPro:IPR013212	UniProt:K7KY19	EnsemblPlants:KRH55929
ProteinID:KRH55929	ProteinID:KRH55929.1	InterPro:Kinase-like_dom_sf	InterPro:Mad3/Bub1_I	PFAM:PF00069	PFAM:PF08311
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51489	PANTHER:PTHR14030	PANTHER:PTHR14030:SF6	InterPro:Prot_kinase_dom
SMART:SM00220	SMART:SM00777	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002339A16	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:47937874..47943300

Molecular Weight (calculated)

60928.4 Da

IEP (calculated)

8.188

GRAVY (calculated)

-0.314

Length

529 amino acids

Sequence
(BLAST)

001: MLSYSPPRFR IAAVDAHHDP LLPFLRSIKK ALEASDDSAS SLSNLLKDCI RNFKNNDRYR NDVRFLKIWL LYMGVSDDFD SVFKEMLDSN VCTNNSSLYV
101: WSASFFELKG RLHDALTIYQ LGICRNTEPI EWLKKARTLF LSRISEIQNA ASTQKVDDKE SKNLEDNGIN PWGTSTMDSL LKKIYPLIMK FDGYRSSTKP
201: YTGKVALSTL KNSSRNKVLE IGGMKYHIKG CAGQGGFAQV YKANVDSDPD NVVALKIQKP AFPWEFYVYR LLDKRILDRE RSSYGFAHRI HVYSDCSILI
301: CDYLANGTLQ DVINSYVVIG KSMEEVLCIY YTIEMLHMVE TLHGVGLIHG DFKPDNLLIR YARGDLTEDG FLSRSGPWCD QGLCLVDWGR GIDLHLFPDH
401: TLFKGDCKTS GFRCIEMLED KPWKFQVDAY GLCAVVHMML HNCYMEVVKK EQSDGSYMYL PKLPFKRYWN IELWKTFFTK MLNQYPHDDD RSLLQDLKKS
501: FQDYLSSNPQ LIKKLKELLS KQRASLCSA

Best Arabidopsis Sequence Match ( AT2G20635.1 )
(BLAST)

001: MTIGYRDAAG DPLFPWLMEI KNSMEDLYAG KNSGYDLDKL LFDCISTYKK DSRYRNDLRF LKIWFLYLEG REDFERVYRE IEETEICKGH SLLYEWYAIF
101: LEVKGLWRRA NSVYQTGLSR KAEPFDRLKE AHSLFLQRIS KRTKASSLEK VGDDAQATDL ETGFVNPWET STVNGLIHKI KPQLVKYDGY HVSNKVFPGK
201: ANLSSLQNYS RNKIIEIGGR KYQMKGCAGQ GGFAQVFKAF IDSNPDEVVA LKVQKPPFPW EFHMYRQLDC RIPDSQRSSF GLAQRVHVYS DYSILVCDYL
301: SHGTLQDVIN SYVVVGKSME EVLCMYYTIE MLNMLETLHS VGIIHGDFKP DNLLIRYPPE NLTETGFHEK TGSWSKKGLC LVDWGRGIDL SLFPRTTEFT
401: GDCRTSGFRC VEMKEDKPWK FQVDTYGLCV IVHMMLHNVY MEIEKKQSLD GGYINMPRTS FKRYWKVDLW KELFTKLLNR ETCEDDTETL RNLRKSMEEY
501: ICSDPKLMKK LNELLAKQRI SLCSS

Arabidopsis Description

BUB1Mitotic checkpoint serine/threonine-protein kinase BUB1 [Source:UniProtKB/Swiss-Prot;Acc:F4IVI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.