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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003249_P001 nucleus
Zm00001d006888_P001
Zm00001d011615_P001
Zm00001d015096_P002
Zm00001d023279_P001 nucleus
Zm00001d025721_P001 nucleus
Zm00001d030420_P001
Zm00001d043831_P001
Zm00001d046884_P001
Zm00001d053956_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G51600.1 Zm00001d003249_P001 AT3G25980.1 25262777
AT5G51600.1 Zm00001d025721_P001 AT3G25980.1 25262777
AT5G51600.1 Zm00001d003249_P001 AT3G25980.1 25262777
AT5G51600.1 Zm00001d025721_P001 AT3G25980.1 25262777
AT5G51600.1 Zm00001d023279_P001 AT5G05510.1 25262777
AT5G51600.1 Zm00001d023279_P001 AT5G05510.1 25262777
AT5G51600.1 Zm00001d006888_P001 AT5G51600.1 25262777
AT5G51600.1 Zm00001d011615_P001 AT5G51600.1 25262777
AT5G51600.1 Zm00001d015096_P002 AT5G51600.1 25262777
AT5G51600.1 Zm00001d030420_P001 AT5G51600.1 25262777
AT5G51600.1 Zm00001d043831_P001 AT5G51600.1 25262777
AT5G51600.1 Zm00001d046884_P001 AT5G51600.1 25262777
AT5G51600.1 Zm00001d053956_P001 AT5G51600.1 25262777
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d046884_P001 Maize plastid 81.27 45.21
Zm00001d030420_P001 Maize cytosol 26.22 30.57
Zm00001d011615_P001 Maize cytosol, nucleus, plastid 63.67 24.11
Zm00001d043831_P001 Maize cytosol, mitochondrion 63.67 23.16
TraesCS3A01G264600.1 Wheat cytosol 59.55 23.08
TraesCS3B01G297900.1 Wheat cytosol 59.55 23.04
OQU87349 Sorghum golgi, vacuole 61.42 22.94
TraesCS3D01G264700.2 Wheat cytosol 59.18 22.9
HORVU3Hr1G063620.1 Barley plastid 58.05 20.78
KRH09228 Soybean cytosol 40.45 20.19
CDY00270 Canola nucleus 38.2 18.92
Bra010069.1-P Field mustard nucleus 38.2 18.92
CDX86911 Canola nucleus 38.2 18.92
GSMUA_Achr5P11340_001 Banana cytosol 47.19 18.89
GSMUA_Achr1P02510_001 Banana cytosol 47.57 18.81
VIT_15s0048g00860.t01 Wine grape cytosol, nucleus, plasma membrane 41.57 18.53
CDX87240 Canola nucleus 37.08 18.3
Bra035900.1-P Field mustard nucleus 37.08 18.3
CDY16786 Canola nucleus 37.08 18.23
AT5G62250.1 Thale cress nucleus 35.96 17.49
KRH38719 Soybean cytosol 41.95 17.39
VIT_16s0022g01820.t01 Wine grape nucleus 47.19 17.26
Zm00001d030008_P005 Maize cytosol 29.96 17.09
Bra014467.1-P Field mustard cytosol 41.2 16.98
CDX89081 Canola cytosol 42.7 16.62
AT3G60840.1 Thale cress cytosol 41.95 16.54
PGSC0003DMT400070431 Potato nucleus 42.7 16.43
Zm00001d037413_P002 Maize cytosol 38.58 16.32
CDY62713 Canola cytosol 41.57 16.23
Bra023930.1-P Field mustard cytosol 43.07 16.22
KRG92454 Soybean nucleus 43.82 16.09
Zm00001d028363_P001 Maize cytosol 36.7 16.04
Bra028266.1-P Field mustard cytosol 42.32 15.98
PGSC0003DMT400079660 Potato cytosol 44.57 15.97
KRH34346 Soybean cytosol 44.57 15.97
AT5G51600.1 Thale cress cytosol 41.95 15.84
Solyc03g007130.2.1 Tomato nucleus 43.45 15.65
Zm00001d045864_P004 Maize mitochondrion 39.33 15.51
Solyc11g072280.1.1 Tomato extracellular 43.07 14.92
Zm00001d020685_P002 Maize cytosol 35.21 14.62
Zm00001d053956_P001 Maize nucleus 32.21 14.43
KRH40591 Soybean nucleus 37.83 14.41
Zm00001d038174_P002 Maize cytosol 32.96 14.36
Zm00001d015096_P002 Maize nucleus 32.58 14.24
Solyc01g091380.2.1 Tomato plastid 38.95 13.98
PGSC0003DMT400033224 Potato nucleus 38.95 13.77
Zm00001d031619_P001 Maize nucleus 30.34 13.71
Zm00001d029060_P002 Maize cytosol, nucleus, plasma membrane 22.1 12.85
Zm00001d003920_P001 Maize cytosol 6.37 12.32
Zm00001d004213_P001 Maize cytosol 6.74 11.92
Zm00001d007926_P001 Maize cytosol 7.12 11.88
Zm00001d047347_P031 Maize cytosol 23.22 11.4
Zm00001d030102_P004 Maize cytosol 23.6 10.62
Zm00001d033794_P001 Maize nucleus 31.46 8.32
Zm00001d049816_P001 Maize nucleus 5.62 5.49
Protein Annotations
EnsemblPlants:Zm00001d006888_P001EnsemblPlants:Zm00001d006888_T001EnsemblPlantsGene:Zm00001d006888Gene3D:1.20.58.1520GO:GO:0000226GO:GO:0000910
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0007049GO:GO:0008017GO:GO:0008150
GO:GO:0009987GO:GO:0016043InterPro:MAP65_Ase1_PRC1PANTHER:PTHR19321PANTHER:PTHR19321:SF8PFAM:PF03999
ProteinID:ONM25412.1SEG:segUniParc:UPI0008435E3CUniProt:A0A1D6F1V2MapMan:35.1:
Description
65-kDa microtubule-associated protein 3
Coordinates
chr2:+:218588918..218590990
Molecular Weight (calculated)
30232.1 Da
IEP (calculated)
4.944
GRAVY (calculated)
-0.409
Length
267 amino acids
Sequence
(BLAST)
001: MQSNQKLQGL REELNAIVPY LEEMRKKKVE RWDQFVDVIE QIKKCWIVST GNAPSVPLLL LKFFLLLPSN LQLRWTLNPY MSGAIDPALV LEQIEAHIAT
101: VKEEAFSRKD ILEKVERWLN ACEEEAWLED YNKVAMLDDN RYNAGRGAHL TLKRAEKARI LVNKILGLVD VLTTKIVAWE AERGKEFTYD GNQEQSGSSS
201: LGSSGMLYEG SSGDNAPFDI NDFPQLNGRP NSAEGGQGQY GNTAMLPNIP MISRLYITSD YSYLKDH
Best Arabidopsis Sequence Match ( AT3G60840.1 )
(BLAST)
001: MIRNSTEQFS RIETTCGLLL RQLQEIWNEM GETEDEKDAS LADIEKECLS VYKRKVEEAS RGKANLLKEI AVGRAEIAAI GSSMGGQEIH SNSRLGENLK
101: EELENVNVQL DGLRKRKAER MIRFNEVIDQ LLKLSLQLGN PTDYLKKFAA EETDLSLQRL EELRSQLGEL QNEKSKRLEE VECLLKTLNS LCSVLGEDFK
201: GMIRGIHSSL VDSNTRDVSR STLDKLDMMI VNLREAKLQR MQKVQDLAVS LLELWNLLDT PAEEQKIFHN VTCSIALTES EITEANILSV ASIKRVEDEV
301: IRLSKIKITK IKEVILRKRL ELEEISRKMH MATEVLKSEN FSVEAIESGV KDPEQLLEQI DSEIAKVKEE ASSRKEILEK VEKWMSACEE ESWLEEYNRD
401: DNRYNAGRGA HLTLKRAEKA RLLVNKLPGM VEALTAKVTA WENERGNEFL YDGVRVLSML GQYKTVWEEK EHEKQRQRDM KKLHGQLITE QEALYGSKPS
501: PNKSGKKPLR TPVNAAMNRK LSLGGAMLHQ SLKHEKATLN SKRTKYYDQN ATSRRDSALP TLSGRRNSEL PGRIRSKNVP VAGKAARSPM LRKPLSPVTS
601: NILNSPEDHH KDAYTTKERI LTPKTNEEKK RAVPTTPAAS VAMTEATTPF TPAVEKRMDE EDVIVEYSFE EVRAGFC
Arabidopsis Description
MAP65-465-kDa microtubule-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZY0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.