Factsheet for Zm00001d011615_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003249_P001	nucleus
Zm00001d006888_P001
Zm00001d011615_P001
Zm00001d015096_P002
Zm00001d023279_P001	nucleus
Zm00001d025721_P001	nucleus
Zm00001d030420_P001
Zm00001d043831_P001
Zm00001d046884_P001
Zm00001d053956_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51600.1	Zm00001d003249_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d025721_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d003249_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d025721_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d023279_P001	AT5G05510.1	25262777
AT5G51600.1	Zm00001d023279_P001	AT5G05510.1	25262777
AT5G51600.1	Zm00001d006888_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d011615_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d015096_P002	AT5G51600.1	25262777
AT5G51600.1	Zm00001d030420_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d043831_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d046884_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d053956_P001	AT5G51600.1	25262777

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030420_P001	Maize	cytosol	31.49	96.94
OQU87349	Sorghum	golgi, vacuole	92.34	91.05
Zm00001d043831_P001	Maize	cytosol, mitochondrion	91.63	88.01
TraesCS3A01G264600.1	Wheat	cytosol	79.86	81.71
TraesCS3D01G264700.2	Wheat	cytosol	79.86	81.59
TraesCS3B01G297900.1	Wheat	cytosol	79.72	81.45
HORVU3Hr1G063620.1	Barley	plastid	79.01	74.66
GSMUA_Achr5P11340_001	Banana	cytosol	62.98	66.57
GSMUA_Achr1P02510_001	Banana	cytosol	63.26	66.07
Zm00001d006888_P001	Maize	cytosol	24.11	63.67
VIT_16s0022g01820.t01	Wine grape	nucleus	62.55	60.41
KRG92454	Soybean	nucleus	58.87	57.08
VIT_15s0048g00860.t01	Wine grape	cytosol, nucleus, plasma membrane	48.23	56.76
Solyc03g007130.2.1	Tomato	nucleus	59.29	56.41
PGSC0003DMT400079660	Potato	cytosol	59.29	56.11
KRH34346	Soybean	cytosol	59.01	55.84
PGSC0003DMT400070431	Potato	nucleus	54.61	55.48
KRH38719	Soybean	cytosol	50.21	54.97
AT5G51600.1	Thale cress	cytosol	55.04	54.88
Bra023930.1-P	Field mustard	cytosol	55.18	54.87
Zm00001d029060_P002	Maize	cytosol, nucleus, plasma membrane	35.6	54.68
Bra028266.1-P	Field mustard	cytosol	54.61	54.46
Solyc11g072280.1.1	Tomato	extracellular	57.02	52.14
CDY00270	Canola	nucleus	39.43	51.58
Bra010069.1-P	Field mustard	nucleus	39.43	51.58
CDX86911	Canola	nucleus	39.43	51.58
Bra035900.1-P	Field mustard	nucleus	39.29	51.2
AT5G62250.1	Thale cress	nucleus	39.86	51.18
Zm00001d030008_P005	Maize	cytosol	33.9	51.07
CDY16786	Canola	nucleus	39.29	51.01
CDX87240	Canola	nucleus	39.01	50.83
Zm00001d047347_P031	Maize	cytosol	38.72	50.18
Zm00001d030102_P004	Maize	cytosol	39.15	46.54
Zm00001d046884_P001	Maize	plastid	31.06	45.62
Solyc01g091380.2.1	Tomato	plastid	47.23	44.76
PGSC0003DMT400033224	Potato	nucleus	47.52	44.37
KRH09228	Soybean	cytosol	33.05	43.55
KRH40591	Soybean	nucleus	43.26	43.51
AT3G60840.1	Thale cress	cytosol	41.13	42.84
Zm00001d037413_P002	Maize	cytosol	38.01	42.47
CDY62713	Canola	cytosol	41.13	42.4
Bra014467.1-P	Field mustard	cytosol	38.87	42.28
CDX89081	Canola	cytosol	40.99	42.13
Zm00001d053956_P001	Maize	nucleus	35.04	41.44
Zm00001d015096_P002	Maize	nucleus	35.46	40.92
Zm00001d028363_P001	Maize	cytosol	34.61	39.93
Zm00001d020685_P002	Maize	cytosol	35.18	38.57
Zm00001d045864_P004	Maize	mitochondrion	37.02	38.55
Zm00001d038174_P002	Maize	cytosol	32.2	37.03
Zm00001d031619_P001	Maize	nucleus	30.78	36.72
Zm00001d007926_P001	Maize	cytosol	6.95	30.62
Zm00001d004213_P001	Maize	cytosol	6.52	30.46
Zm00001d003920_P001	Maize	cytosol	5.96	30.43
Zm00001d049816_P001	Maize	nucleus	11.49	29.67
Zm00001d033794_P001	Maize	nucleus	30.07	20.99

Protein Annotations

Gene3D:1.20.58.1520	EntrezGene:100191450	MapMan:13.4.3.5	UniProt:A0A1D6G2E3	ProteinID:AQK97554.1	ProteinID:AQK97555.1
ncoils:Coil	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1
PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF8	UniParc:UPI000842FA4E	EnsemblPlantsGene:Zm00001d011615	EnsemblPlants:Zm00001d011615_P001
EnsemblPlants:Zm00001d011615_T001	SEG:seg	:	:	:	:

Description

65-kDa microtubule-associated protein 3

Coordinates

chr8:+:156039607..156044114

Molecular Weight (calculated)

79308.3 Da

IEP (calculated)

6.068

GRAVY (calculated)

-0.484

Length

705 amino acids

Sequence
(BLAST)

001: MSSAVKDQLQ QMSTTCDSLL LELNVIWDEV GEPDMARDRM LLELEQECLD VYKRKVDQAN RCRAQLRQAI AEAEAELAGI CSAMGEPPIH VRQSNQKLQG
101: LREVLNAIVP YLEEMRKKKV ERWDQFVDVI EQIKKVASEI RPADFVPFRI PVDQSDLSLR KLEELTKELQ SLQKEKSDRL KQVMEHLNTL HSLCEVLGVD
201: FKQTVNEVHP SLGEADGSKN LSNCTIESLA SAASRLRELK VQRMQKLQDL ASSMLELWNL MDTPLEEQQM FQNVTCNIAA SEHEITEPNT LSIDFLSYVE
301: SEVLRLEQLK ASKMKDLVLK KKTELEEHRR RAHLIGEEGY AAEFSDEAIE AGAVDPSLVL EQIEAHIATV KEEAFSRKDI LEKVERWLNA CEEEAWLEDY
401: NKVAMLDDNR YNAGRGAHLT LKRAEKARIL VNKIPGLVDV LTTKIVAWEA ERGKEFTYDG VRLMSMLEEY MIVRQEKELQ KKRQRDQKKI QDQLKAEQEA
501: LYGSKPSPSK PQSTKKAPRH SMGGANRRLS LGGATMQAPK TDILHSKTAR AAKKAEDLGA LSPSNLSFPF IYCNAGSRGL DIAGLPIKKL SFNASTLREA
601: ETPRKPFAQI MPGNNVSPMP TRPISSATEE ENKTPRTFVG GLNAKTPATV TAPMQMAMTP AVANKVIATP ATLFQEKADS PALPADIEYS FEERRLAVYL
701: ARQVA

Best Arabidopsis Sequence Match ( AT3G60840.1 )
(BLAST)

001: MIRNSTEQFS RIETTCGLLL RQLQEIWNEM GETEDEKDAS LADIEKECLS VYKRKVEEAS RGKANLLKEI AVGRAEIAAI GSSMGGQEIH SNSRLGENLK
101: EELENVNVQL DGLRKRKAER MIRFNEVIDQ LLKLSLQLGN PTDYLKKFAA EETDLSLQRL EELRSQLGEL QNEKSKRLEE VECLLKTLNS LCSVLGEDFK
201: GMIRGIHSSL VDSNTRDVSR STLDKLDMMI VNLREAKLQR MQKVQDLAVS LLELWNLLDT PAEEQKIFHN VTCSIALTES EITEANILSV ASIKRVEDEV
301: IRLSKIKITK IKEVILRKRL ELEEISRKMH MATEVLKSEN FSVEAIESGV KDPEQLLEQI DSEIAKVKEE ASSRKEILEK VEKWMSACEE ESWLEEYNRD
401: DNRYNAGRGA HLTLKRAEKA RLLVNKLPGM VEALTAKVTA WENERGNEFL YDGVRVLSML GQYKTVWEEK EHEKQRQRDM KKLHGQLITE QEALYGSKPS
501: PNKSGKKPLR TPVNAAMNRK LSLGGAMLHQ SLKHEKATLN SKRTKYYDQN ATSRRDSALP TLSGRRNSEL PGRIRSKNVP VAGKAARSPM LRKPLSPVTS
601: NILNSPEDHH KDAYTTKERI LTPKTNEEKK RAVPTTPAAS VAMTEATTPF TPAVEKRMDE EDVIVEYSFE EVRAGFC

Arabidopsis Description

MAP65-465-kDa microtubule-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZY0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.