Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH38719 | Soybean | cytosol | 64.3 | 53.42 |
| Zm00001d030420_P001 | Maize | cytosol | 18.88 | 44.1 |
| KRG92454 | Soybean | nucleus | 58.69 | 43.19 |
| KRH34346 | Soybean | cytosol | 58.88 | 42.28 |
| Zm00001d006888_P001 | Maize | cytosol | 20.19 | 40.45 |
| Bra010069.1-P | Field mustard | nucleus | 40.75 | 40.45 |
| CDY00270 | Canola | nucleus | 40.75 | 40.45 |
| CDX86911 | Canola | nucleus | 40.56 | 40.26 |
| Bra035900.1-P | Field mustard | nucleus | 40.19 | 39.74 |
| CDX87240 | Canola | nucleus | 40.19 | 39.74 |
| VIT_16s0022g01820.t01 | Wine grape | nucleus | 54.21 | 39.73 |
| CDY16786 | Canola | nucleus | 40.0 | 39.41 |
| AT5G62250.1 | Thale cress | nucleus | 40.37 | 39.34 |
| KRH09582 | Soybean | cytosol, mitochondrion, nucleus | 11.03 | 39.07 |
| PGSC0003DMT400070431 | Potato | nucleus | 48.41 | 37.32 |
| AT5G51600.1 | Thale cress | cytosol | 48.97 | 37.06 |
| PGSC0003DMT400079660 | Potato | cytosol | 51.4 | 36.91 |
| Bra023930.1-P | Field mustard | cytosol | 48.78 | 36.81 |
| Bra028266.1-P | Field mustard | cytosol | 48.6 | 36.78 |
| Solyc03g007130.2.1 | Tomato | nucleus | 50.65 | 36.57 |
| GSMUA_Achr5P11340_001 | Banana | cytosol | 44.49 | 35.68 |
| GSMUA_Achr5P10040_001 | Banana | nucleus | 41.87 | 35.33 |
| GSMUA_Achr1P02510_001 | Banana | cytosol | 44.11 | 34.96 |
| Solyc11g072280.1.1 | Tomato | extracellular | 49.53 | 34.37 |
| TraesCS3D01G264700.2 | Wheat | cytosol | 43.55 | 33.77 |
| TraesCS3A01G264600.1 | Wheat | cytosol | 43.36 | 33.67 |
| TraesCS3B01G297900.1 | Wheat | cytosol | 43.36 | 33.62 |
| Zm00001d011615_P001 | Maize | cytosol, nucleus, plastid | 43.55 | 33.05 |
| OQU87349 | Sorghum | golgi, vacuole | 43.93 | 32.87 |
| KRH01846 | Soybean | extracellular | 20.75 | 32.08 |
| KRG99429 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 8.04 | 31.85 |
| KRH73815 | Soybean | cytosol | 34.58 | 31.79 |
| Zm00001d043831_P001 | Maize | cytosol, mitochondrion | 43.36 | 31.61 |
| TraesCS1B01G400200.1 | Wheat | cytosol | 40.0 | 31.42 |
| TraesCS1A01G378900.1 | Wheat | cytosol | 39.63 | 31.31 |
| KRH33387 | Soybean | cytosol | 6.73 | 31.3 |
| TraesCS1D01G386100.1 | Wheat | cytosol | 39.81 | 31.28 |
| Os05t0552900-01 | Rice | cytosol | 42.62 | 31.19 |
| KRH46253 | Soybean | nucleus | 18.32 | 31.11 |
| KRH46955 | Soybean | cytosol | 16.45 | 31.1 |
| HORVU1Hr1G083810.7 | Barley | cytosol | 39.63 | 30.99 |
| HORVU3Hr1G063620.1 | Barley | plastid | 42.8 | 30.7 |
| KRH14311 | Soybean | endoplasmic reticulum | 33.83 | 30.68 |
| Os02t0126300-01 | Rice | plasma membrane | 31.78 | 30.41 |
| KRG89099 | Soybean | cytosol | 34.02 | 30.28 |
| KRH40910 | Soybean | cytosol, mitochondrion, nucleus | 33.83 | 30.12 |
| TraesCSU01G016800.1 | Wheat | nucleus | 30.84 | 30.0 |
| KRG98677 | Soybean | cytosol | 24.3 | 29.61 |
| KRH40591 | Soybean | nucleus | 38.5 | 29.39 |
| TraesCS6A01G089500.2 | Wheat | nucleus | 30.09 | 29.38 |
| KRH14315 | Soybean | cytosol, endoplasmic reticulum | 32.71 | 29.36 |
| TraesCS6B01G111900.1 | Wheat | nucleus | 29.53 | 28.78 |
| EES06214 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.65 | 28.03 |
| Zm00001d053956_P001 | Maize | nucleus | 31.21 | 28.02 |
| Zm00001d015096_P002 | Maize | nucleus | 31.4 | 27.5 |
| KRG97427 | Soybean | cytosol | 28.22 | 27.4 |
| KRH20613 | Soybean | cytosol | 28.79 | 27.16 |
| KRH31473 | Soybean | cytosol | 29.72 | 26.77 |
| Zm00001d046884_P001 | Maize | plastid | 22.24 | 24.79 |
Protein Annotations
| Gene3D:1.20.58.1520 | MapMan:35.1 | UniProt:A0A0R0FT02 | EMBL:ACUP02010275 | ncoils:Coil | EnsemblPlantsGene:GLYMA_16G204300 |
| GO:GO:0000226 | GO:GO:0000910 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007049 |
| GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | EnsemblPlants:KRH09228 | ProteinID:KRH09228 |
| ProteinID:KRH09228.1 | InterPro:MAP65_Ase1_PRC1 | PFAM:PF03999 | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF7 | UniParc:UPI0006EDA819 |
Description
hypothetical protein
Coordinates
chr16:+:36527485..36532808
Molecular Weight (calculated)
60771.7 Da
IEP (calculated)
5.671
GRAVY (calculated)
-0.420
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFKSVAGIC SAMGERPVHV RQFDQKAVSL KEELARVCPE LEEMQERKSE RRNQFIEVQE QIQSITNEIY SPSITASVDE TDLSLRKLEE FQTAFCISKG
101: EVCVNQFKPS CIVLCYFPCK IVSGIHPSLG NSEGPRSVNN DTINQLPIAI QDLQKVKLQR MQRLQDPAST MLELWNLMDT PLEEQRMFQN FTLYTLEELK
201: SSKMKELVLK KRAELEEICQ KTHLIPEIDS AVKYVVEATE SGSVDPAIVL EQIELQIAQV KEEAFVRKEI LEKVEKWLSA CDEEYWLEEY NSDENRYNAG
301: RGSYLTLKRA KKACALVKKL PAMVDALTSK TVASEKDKGI EFTYDGTCLV CMLENYSLSR QEKEQERCRQ WELKKLQGQI IVEKELFSTG KTDKAHQNEQ
401: LNNLDDDVSC GSQGHISAAR RGEYCWCSYE KILYRCWKCV PDVVSPLTRQ PFCPISSTVS SKANVAFAAN DTHNEKLQKT LVVSNFPSIT TSKTTTVVDK
501: RTKLQRAVWV DAATKNSTVS AKSPGLIVSV YVDPI
101: EVCVNQFKPS CIVLCYFPCK IVSGIHPSLG NSEGPRSVNN DTINQLPIAI QDLQKVKLQR MQRLQDPAST MLELWNLMDT PLEEQRMFQN FTLYTLEELK
201: SSKMKELVLK KRAELEEICQ KTHLIPEIDS AVKYVVEATE SGSVDPAIVL EQIELQIAQV KEEAFVRKEI LEKVEKWLSA CDEEYWLEEY NSDENRYNAG
301: RGSYLTLKRA KKACALVKKL PAMVDALTSK TVASEKDKGI EFTYDGTCLV CMLENYSLSR QEKEQERCRQ WELKKLQGQI IVEKELFSTG KTDKAHQNEQ
401: LNNLDDDVSC GSQGHISAAR RGEYCWCSYE KILYRCWKCV PDVVSPLTRQ PFCPISSTVS SKANVAFAAN DTHNEKLQKT LVVSNFPSIT TSKTTTVVDK
501: RTKLQRAVWV DAATKNSTVS AKSPGLIVSV YVDPI
001: MLMELERECL QIYQRKVDEA ANSKAKLHQS VASIEAEVAS LMAALGVLNI NSPIKLDKGS KSLKEKLAAV TPLVEELRIQ KEERMKQFSD IKAQIEKISG
101: EISGYSDHLN KAMNISLTLE EQDLTLRNLN EYQTHLRTLQ KEKSDRLNKV LGYVNEVHAL CGVLGVDFSQ TVSAVHPSLH RTDQEQSTNI SDSTLEGLEH
201: MIQKLKTERK SRFQKLKDVV ASLFELWNLM DTPQEDRTKF GKVTYVVRSS EANITEPGIL STETIEQVST EVDSLSKLKA SRMKELVMKR RSELEDLCRL
301: THIQPDTSTS AEKSTALIDS GLVDPSELLA NIEMQINKIK DEAQSRKDIM DRIDRWLSAC EEENWLEEYN LDENRYSAGR GGHVNLKRAE RARVTINKIP
401: GMVDTLIKKT LVWEEDMQKS FLYDGVRLVN ILEDYKLTRK QQEEEKKRYR DQKKRQDLLL TQRESIYGSK PSPRRSSSFR KPNGFNISNG NGSVPPTPRR
501: GSVGTTTPDV LLTPRSYSGH HRQNGYFKEV RRLSTTPLNY VAMQKEDTVS TTYTSIYSSE PDSPLQG
101: EISGYSDHLN KAMNISLTLE EQDLTLRNLN EYQTHLRTLQ KEKSDRLNKV LGYVNEVHAL CGVLGVDFSQ TVSAVHPSLH RTDQEQSTNI SDSTLEGLEH
201: MIQKLKTERK SRFQKLKDVV ASLFELWNLM DTPQEDRTKF GKVTYVVRSS EANITEPGIL STETIEQVST EVDSLSKLKA SRMKELVMKR RSELEDLCRL
301: THIQPDTSTS AEKSTALIDS GLVDPSELLA NIEMQINKIK DEAQSRKDIM DRIDRWLSAC EEENWLEEYN LDENRYSAGR GGHVNLKRAE RARVTINKIP
401: GMVDTLIKKT LVWEEDMQKS FLYDGVRLVN ILEDYKLTRK QQEEEKKRYR DQKKRQDLLL TQRESIYGSK PSPRRSSSFR KPNGFNISNG NGSVPPTPRR
501: GSVGTTTPDV LLTPRSYSGH HRQNGYFKEV RRLSTTPLNY VAMQKEDTVS TTYTSIYSSE PDSPLQG
Arabidopsis Description
MAP65-665-kDa microtubule-associated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIS3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.