Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40910 | Soybean | cytosol, mitochondrion, nucleus | 96.84 | 96.84 |
| KRH46955 | Soybean | cytosol | 40.77 | 86.57 |
| KRH01846 | Soybean | extracellular | 48.92 | 84.97 |
| KRH09582 | Soybean | cytosol, mitochondrion, nucleus | 20.3 | 80.79 |
| KRH33387 | Soybean | cytosol | 14.64 | 76.52 |
| VIT_01s0011g06330.t01 | Wine grape | nucleus | 75.04 | 75.29 |
| CDY17624 | Canola | nucleus | 69.22 | 68.42 |
| Bra024843.1-P | Field mustard | nucleus | 69.05 | 68.26 |
| AT2G01910.1 | Thale cress | nucleus | 68.89 | 68.09 |
| PGSC0003DMT400075869 | Potato | nucleus | 67.39 | 67.61 |
| Solyc04g008290.2.1 | Tomato | nucleus | 67.39 | 67.5 |
| PGSC0003DMT400058659 | Potato | cytosol, plastid | 67.22 | 67.22 |
| Solyc01g005080.2.1 | Tomato | cytosol | 62.23 | 66.91 |
| CDY33748 | Canola | cytosol | 66.06 | 66.5 |
| CDX81663 | Canola | cytosol | 65.89 | 66.22 |
| Bra026811.1-P | Field mustard | cytosol, nucleus, plastid | 65.39 | 66.05 |
| AT1G14690.1 | Thale cress | cytosol | 66.22 | 66.0 |
| CDY15798 | Canola | endoplasmic reticulum, golgi | 45.59 | 64.93 |
| CDY03090 | Canola | nucleus | 66.39 | 64.25 |
| GSMUA_Achr6P23030_001 | Banana | cytosol | 58.24 | 62.28 |
| GSMUA_Achr10P... | Banana | nucleus | 61.56 | 61.26 |
| EER98994 | Sorghum | nucleus | 57.74 | 58.22 |
| TraesCS5D01G240800.1 | Wheat | nucleus | 56.91 | 58.06 |
| GSMUA_Achr6P04350_001 | Banana | cytosol | 60.57 | 57.78 |
| Os03t0237600-04 | Rice | nucleus | 58.24 | 57.38 |
| TraesCS5A01G233900.1 | Wheat | nucleus | 55.91 | 57.34 |
| TraesCS5B01G232400.1 | Wheat | nucleus | 56.07 | 57.22 |
| TraesCS4A01G074200.2 | Wheat | nucleus | 58.07 | 57.12 |
| Os09t0450300-01 | Rice | nucleus | 56.24 | 56.81 |
| EER92583 | Sorghum | cytosol | 57.74 | 56.79 |
| Zm00001d028363_P001 | Maize | cytosol | 57.57 | 56.63 |
| TraesCS4B01G230500.2 | Wheat | nucleus | 57.57 | 56.63 |
| TraesCS4D01G231800.3 | Wheat | nucleus | 57.57 | 56.63 |
| GSMUA_Achr6P05980_001 | Banana | cytosol | 55.07 | 55.63 |
| Zm00001d020685_P002 | Maize | cytosol | 57.4 | 53.65 |
| Os03t0719000-01 | Rice | cytosol, nucleus | 38.1 | 48.52 |
| KRH73815 | Soybean | cytosol | 46.92 | 48.45 |
| HORVU4Hr1G064580.2 | Barley | endoplasmic reticulum, nucleus, plastid | 57.9 | 48.2 |
| KRH14311 | Soybean | endoplasmic reticulum | 46.42 | 47.29 |
| EER90980 | Sorghum | cytosol | 48.75 | 46.29 |
| TraesCS4A01G263800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 46.76 | 45.32 |
| TraesCS4D01G051300.1 | Wheat | cytosol | 44.43 | 45.18 |
| TraesCS4B01G051200.1 | Wheat | nucleus | 46.42 | 45.15 |
| KRG98677 | Soybean | cytosol | 32.61 | 44.65 |
| KRH14315 | Soybean | cytosol, endoplasmic reticulum | 43.76 | 44.13 |
| KRH46253 | Soybean | nucleus | 22.63 | 43.17 |
| KRG97427 | Soybean | cytosol | 38.27 | 41.74 |
| KRH20613 | Soybean | cytosol | 38.27 | 40.56 |
| Bra026625.1-P | Field mustard | mitochondrion | 25.79 | 40.36 |
| KRH38719 | Soybean | cytosol | 43.09 | 40.22 |
| HORVU4Hr1G008440.3 | Barley | nucleus | 46.76 | 39.75 |
| KRH31473 | Soybean | cytosol | 38.44 | 38.89 |
| KRG92454 | Soybean | nucleus | 45.09 | 37.28 |
| KRH34346 | Soybean | cytosol | 45.76 | 36.91 |
| GSMUA_Achr2P21660_001 | Banana | endoplasmic reticulum, extracellular | 56.91 | 36.08 |
| KRG99429 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 7.82 | 34.81 |
| KRH09228 | Soybean | cytosol | 30.28 | 34.02 |
| KRH40591 | Soybean | nucleus | 37.77 | 32.38 |
| CDY09401 | Canola | endoplasmic reticulum, golgi, plasma membrane | 29.28 | 30.93 |
| Zm00001d033794_P001 | Maize | nucleus | 47.75 | 28.42 |
Protein Annotations
| Gene3D:1.20.58.1520 | EntrezGene:100799043 | MapMan:35.1 | EMBL:ACUP02012185 | ncoils:Coil | EnsemblPlantsGene:GLYMA_20G001000 |
| GO:GO:0000226 | GO:GO:0000910 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007049 |
| GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | UniProt:I1NCV9 | EnsemblPlants:KRG89099 |
| ProteinID:KRG89099 | ProteinID:KRG89099.1 | InterPro:MAP65_Ase1_PRC1 | PFAM:PF03999 | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF5 |
| UniParc:UPI000233D993 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:106923..113414
Molecular Weight (calculated)
68252.4 Da
IEP (calculated)
7.576
GRAVY (calculated)
-0.665
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAIGAHGTS IRTSSTCTAL LRELEQIWND IGETEVEKDR MLMELERECL EVYRRKVDEA ANTKARFHQT VAAKEAELAT LMAALGEHDI HSPIKMEKRS
101: ASLKQKLASI TPLVEELKKK KDERLKQFED VKTQIEKISG EIFGFHSVNN ALSSTAVEDE HDLSLRRLNE YQTHLRTLQK EKSDRLQKVL QCVNEVHSLC
201: SVLGLDFGQT VGDVHPSLHG TQVEQSTNIS NSTLEGLEQA ILKLKIERKT RIQKLKDVVS KLFELWNLMD SSKEERNCFM KITSIVGTSE SEITERGVLS
301: TEMIEKASAE VDRLAKLKAS RMKELVFKKR SELEEICKLT HTEPDTSTTA EKASALIDSG LVDPSELLAN IEAQIIKAKD EALSRKEVTD RIDKWFAACE
401: EENWLDEYNQ DDNRYCAGRG AHINLKRAER ARITISKIPA MVDNLINKTL AWEDEKKTHF LYDGVRLVSI LDDYKLARQQ KEEDKRRHRD LKKMQDLLLN
501: QKEAMYGSKP SPRKNNSFRK TNSYRANGNG SMPPTPRRNS LSGGTTSELL TPRSYSGRQN GYFKEMRRLS TAPLNFVAIS KEDTMSYASL CGSEPDSPPQ
601: V
101: ASLKQKLASI TPLVEELKKK KDERLKQFED VKTQIEKISG EIFGFHSVNN ALSSTAVEDE HDLSLRRLNE YQTHLRTLQK EKSDRLQKVL QCVNEVHSLC
201: SVLGLDFGQT VGDVHPSLHG TQVEQSTNIS NSTLEGLEQA ILKLKIERKT RIQKLKDVVS KLFELWNLMD SSKEERNCFM KITSIVGTSE SEITERGVLS
301: TEMIEKASAE VDRLAKLKAS RMKELVFKKR SELEEICKLT HTEPDTSTTA EKASALIDSG LVDPSELLAN IEAQIIKAKD EALSRKEVTD RIDKWFAACE
401: EENWLDEYNQ DDNRYCAGRG AHINLKRAER ARITISKIPA MVDNLINKTL AWEDEKKTHF LYDGVRLVSI LDDYKLARQQ KEEDKRRHRD LKKMQDLLLN
501: QKEAMYGSKP SPRKNNSFRK TNSYRANGNG SMPPTPRRNS LSGGTTSELL TPRSYSGRQN GYFKEMRRLS TAPLNFVAIS KEDTMSYASL CGSEPDSPPQ
601: V
001: MLEIGSPNAL FFRTNTTCNN LLRELQKIWV EIGETETEKD RMLMELEREC LQIYQRKVDE AANSKAKLHQ SVASIEAEVA SLMAALGVLN INSPIKLDKG
101: SKSLKEKLAA VTPLVEELRI QKEERMKQFS DIKAQIEKIS GEISGYSDHL NKAMNISLTL EEQDLTLRNL NEYQTHLRTL QKEKSDRLNK VLGYVNEVHA
201: LCGVLGVDFS QTVSAVHPSL HRTDQEQSTN ISDSTLEGLE HMIQKLKTER KSRFQKLKDV VASLFELWNL MDTPQEDRTK FGKVTYVVRS SEANITEPGI
301: LSTETIEQVS TEVDSLSKLK ASRMKELVMK RRSELEDLCR LTHIQPDTST SAEKSTALID SGLVDPSELL ANIEMQINKI KDEAQSRKDI MDRIDRWLSA
401: CEEENWLEEY NLDENRYSAG RGGHVNLKRA ERARVTINKI PGMVDTLIKK TLVWEEDMQK SFLYDGVRLV NILEDYKLTR KQQEEEKKRY RDQKKRQDLL
501: LTQRESIYGS KPSPRRSSSF RKPNGFNISN GNGSVPPTPR RGSVGTTTPD VLLTPRSYSG HHRQNGYFKE VRRLSTTPLN YVAMQKEDTV STTYTSIYSS
601: EPDSPLQG
101: SKSLKEKLAA VTPLVEELRI QKEERMKQFS DIKAQIEKIS GEISGYSDHL NKAMNISLTL EEQDLTLRNL NEYQTHLRTL QKEKSDRLNK VLGYVNEVHA
201: LCGVLGVDFS QTVSAVHPSL HRTDQEQSTN ISDSTLEGLE HMIQKLKTER KSRFQKLKDV VASLFELWNL MDTPQEDRTK FGKVTYVVRS SEANITEPGI
301: LSTETIEQVS TEVDSLSKLK ASRMKELVMK RRSELEDLCR LTHIQPDTST SAEKSTALID SGLVDPSELL ANIEMQINKI KDEAQSRKDI MDRIDRWLSA
401: CEEENWLEEY NLDENRYSAG RGGHVNLKRA ERARVTINKI PGMVDTLIKK TLVWEEDMQK SFLYDGVRLV NILEDYKLTR KQQEEEKKRY RDQKKRQDLL
501: LTQRESIYGS KPSPRRSSSF RKPNGFNISN GNGSVPPTPR RGSVGTTTPD VLLTPRSYSG HHRQNGYFKE VRRLSTTPLN YVAMQKEDTV STTYTSIYSS
601: EPDSPLQG
Arabidopsis Description
MAP65-665-kDa microtubule-associated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIS3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.