Factsheet for TraesCS4D01G231800.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G230500.2	Wheat	nucleus	98.85	98.85
TraesCS4A01G074200.2	Wheat	nucleus	97.87	97.87
Os03t0237600-04	Rice	nucleus	85.76	85.9
EER92583	Sorghum	cytosol	85.76	85.76
Zm00001d028363_P001	Maize	cytosol	84.29	84.29
HORVU4Hr1G064580.2	Barley	endoplasmic reticulum, nucleus, plastid	98.53	83.38
GSMUA_Achr10P...	Banana	nucleus	60.88	61.59
TraesCS5D01G240800.1	Wheat	nucleus	57.94	60.1
VIT_01s0011g06330.t01	Wine grape	nucleus	58.43	59.6
KRH09582	Soybean	cytosol, mitochondrion, nucleus	14.24	57.62
KRG89099	Soybean	cytosol	56.63	57.57
PGSC0003DMT400075869	Potato	nucleus	56.3	57.43
KRH40910	Soybean	cytosol, mitochondrion, nucleus	56.46	57.4
PGSC0003DMT400058659	Potato	cytosol, plastid	56.46	57.4
Solyc01g005080.2.1	Tomato	cytosol	52.37	57.25
Solyc04g008290.2.1	Tomato	nucleus	56.14	57.17
CDY17624	Canola	nucleus	56.14	56.41
Bra024843.1-P	Field mustard	nucleus	55.97	56.25
KRH46955	Soybean	cytosol	26.02	56.18
CDY15798	Canola	endoplasmic reticulum, golgi	38.13	55.21
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	53.52	54.96
GSMUA_Achr6P05980_001	Banana	cytosol	53.36	54.79
AT2G01910.1	Thale cress	nucleus	54.5	54.77
CDX81663	Canola	cytosol	53.52	54.68
CDY33748	Canola	cytosol	53.36	54.61
AT1G14690.1	Thale cress	cytosol	53.36	54.06
CDY03090	Canola	nucleus	54.66	53.78
KRH01846	Soybean	extracellular	30.28	53.47
TraesCS4D01G051300.1	Wheat	cytosol	46.32	47.88
TraesCS7D01G399400.1	Wheat	cytosol	42.88	45.17
TraesCS7D01G224800.1	Wheat	cytosol	40.92	42.96
TraesCS1D01G256000.1	Wheat	cytosol	35.35	40.15
TraesCS6D01G263300.1	Wheat	cytosol	37.64	39.18
GSMUA_Achr2P21660_001	Banana	endoplasmic reticulum, extracellular	55.97	36.08
TraesCS7D01G261100.1	Wheat	nucleus	34.37	35.59
TraesCS3D01G264700.2	Wheat	cytosol	39.77	35.22
TraesCS1D01G386100.1	Wheat	cytosol	39.12	35.1
Bra026625.1-P	Field mustard	mitochondrion	20.95	33.33
CDY09401	Canola	endoplasmic reticulum, golgi, plasma membrane	25.04	26.89

Protein Annotations

EnsemblPlants:TraesCS4D01G231800.3	EnsemblPlantsGene:TraesCS4D01G231800	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1
ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF12	PFAM:PF03999	SEG:seg	MapMan:35.1

Description

No Description!

Coordinates

chr4D:+:391716837..391721604

Molecular Weight (calculated)

69593.4 Da

IEP (calculated)

6.685

GRAVY (calculated)

-0.730

Length

611 amino acids

Sequence
(BLAST)

001: MGETAMAGYG LDRPARCSVS FDTPCGSLLR ELEQIWTEIG EREQDKDRMF QELEAECMRV YRRKVDSANA DRSQLRQSVM AKEAELKALV ASIGENTTQF
101: KVNEKHASLK EQLAAVTPLL DDLRAMKEER IKQFSNVQSQ IETINAQISD HNYQHDDGSS KRLNNDHDLS TRRLADLQMQ LRNLQKEKSD RLQKVFVYVD
201: EVHCLCAVLG MDFAKTVKDV HPSLHGTNSD NSTNISDSTL EGLTQTILKL KAEKRTRVSK LQEIVGKLHK LWNLMESTEQ ERRHFSEVAA VLGSSEEEIT
301: SPSVLSLETI QETEEEVERL TKQKASRMKE LVLKRRVELE NICRNAHMEP DTSTAPEKIV ALIDSGLVDP CELLSNIEAQ IAKANEESHT RKDIMERVDK
401: WLSACDEETW LEEYNQDDNR YSAGRGAHLN LKRAEKARLL VQKIPTMIDN LIDKTFAWED ESNTPFLYDG VRLVAILEEQ KLRRVQKEED KKRYRDQKKL
501: QNLLLKEKEL IFGSKSVPRK TSSFNRRTSG HHPNGNGAGF MTPMPRRVSA GSATPELLTP RSYSGRYNNY FKENRRMTAT PLNFSTASKD DSMSSFASIS
601: GSEPGSPLVL H

Best Arabidopsis Sequence Match ( AT1G14690.1 )
(BLAST)

001: MLEIESPTSL CFRTNTTCNA LLRELQKIWV DIGESDAEKD RMLMELEKEC LEIYRRKVDE AANSKAQLHQ SLVSIEAEIA SLLAALGVFN SHSPMKAKEG
101: SKSLKEKLAA VRPMLEDLRL QKDERMKQFV DIKAQIEKMS GEISGYSDQL NKTMVGSLAL DEQDLTLRKL NEYQTHLRSL QKEKSDRLNK VLDYVNEVHT
201: LCGVLGVDFG QTVSEVHPSL HRTDHEQSTN ISDDTLDGLH HMIHKLKTER SVRFQKLKDV AGSLFELWNL MDTSQEERTK FASVSYVVRS SESDITEPNI
301: LSSETIEQVS AEVDCFNKLK ASRMKELVMK RRTELENLCR LAHIEADTST SLEKSTALID SGLVDPSELL TNIELHINKI KEEAHSRKEI IDRIDRWLSA
401: CEEENWLEEY NQDETRYSAG RGGHVNLKHA ERARITVNKI PSMVDNLIKK TLLWEDETRK SFLYDGVRLV SILEDYKLTR KQQEEEKRRY RDQKKMQDLL
501: IKRRESIYGS KPSPRRSNSV RKTNGYNGDA SVPPTPRRNS AGATNNDIMT TPRSYSSHRQ NGYFKEVRRL STAPLNFVAI PKEDSVSTYT SVCGSEPDSP
601: LYN

Arabidopsis Description

MAP65-765-kDa microtubule-associated protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L836]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.