Factsheet for TraesCS7D01G399400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G304900.2	Wheat	cytosol	98.45	98.45
TraesCS7A01G405500.1	Wheat	cytosol	98.45	98.45
HORVU7Hr1G094860.1	Barley	cytosol	96.9	96.9
Os06t0611000-01	Rice	nucleus	84.48	84.34
EER88641	Sorghum	cytosol	83.1	83.1
GSMUA_Achr4P19380_001	Banana	cytosol	70.17	69.45
GSMUA_Achr7P06200_001	Banana	cytosol	70.34	69.39
KRH73815	Soybean	cytosol	68.28	68.04
GSMUA_Achr4P03890_001	Banana	cytosol	68.28	67.58
GSMUA_Achr3P13450_001	Banana	cytosol	68.28	67.23
KRH14311	Soybean	endoplasmic reticulum	67.76	66.61
Solyc07g064970.2.1	Tomato	nucleus	66.03	65.92
PGSC0003DMT400057428	Potato	cytosol	66.03	65.92
VIT_19s0090g01230.t01	Wine grape	endoplasmic reticulum	62.93	65.18
Bra028986.1-P	Field mustard	cytosol	64.48	63.61
CDY19902	Canola	cytosol	63.97	63.42
PGSC0003DMT400033471	Potato	cytosol	62.76	63.41
KRH14315	Soybean	cytosol, endoplasmic reticulum	65.0	63.26
CDY17313	Canola	cytosol	63.62	63.08
Bra002922.1-P	Field mustard	cytosol	63.62	63.08
Solyc12g014490.1.1	Tomato	cytosol	61.03	62.43
CDX89305	Canola	cytosol	60.69	61.86
AT5G55230.2	Thale cress	cytosol	65.52	61.69
CDY14300	Canola	nucleus	61.9	61.68
CDY20777	Canola	cytosol	62.59	61.63
Bra026405.1-P	Field mustard	cytosol	60.34	61.51
Bra035564.1-P	Field mustard	cytosol	62.24	61.5
CDY06596	Canola	cytosol	62.24	61.29
KRG98677	Soybean	cytosol	46.38	61.28
AT4G26760.1	Thale cress	cytosol	61.03	61.25
Bra010428.1-P	Field mustard	cytosol	61.38	61.17
TraesCS7D01G224800.1	Wheat	cytosol	60.34	60.14
CDY36737	Canola	nucleus	64.66	59.52
KRH46253	Soybean	nucleus	31.72	58.41
CDY12006	Canola	cytosol	64.31	57.92
TraesCS6D01G263300.1	Wheat	cytosol	58.45	57.75
CDX94287	Canola	nucleus	59.83	52.42
TraesCS5D01G240800.1	Wheat	nucleus	45.0	44.31
TraesCS1D01G256000.1	Wheat	cytosol	40.69	43.87
CDX97365	Canola	nucleus	61.21	43.83
TraesCS4D01G231800.3	Wheat	nucleus	45.17	42.88
TraesCS7D01G261100.1	Wheat	nucleus	40.34	39.66
TraesCS1D01G386100.1	Wheat	cytosol	46.21	39.35
TraesCS3D01G264700.2	Wheat	cytosol	46.21	38.84
TraesCS4D01G051300.1	Wheat	cytosol	38.62	37.9

Protein Annotations

EnsemblPlants:TraesCS7D01G399400.1	EnsemblPlantsGene:TraesCS7D01G399400	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1
ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF15	PFAM:PF03999	SEG:seg	MapMan:13.4.3.6

Description

No Description!

Coordinates

chr7D:-:515470336..515475818

Molecular Weight (calculated)

65114.5 Da

IEP (calculated)

5.390

GRAVY (calculated)

-0.515

Length

580 amino acids

Sequence
(BLAST)

001: MGVAGHNDPL LGETTCGSLL QQLQLIWDEV GESDDDRDKM LLQLEQECLD VYRRKVDQAS SSRARLLQQL ANSKSELTRL LSSLGELSIS GVIVPDKTTG
101: TIKEQLAATS PFLEQLCRKK EKRVKEFADV QLQIQTIRGE IAGTLQVGDH LEMPHVNEDD LSMKKLNEFL FELQALQKEK SDRLHKILDF VSSVHDLCSV
201: LGMDFLATVT EVHPSLIDSV GAHSKSVSDE TISRLSKMVT ELKEEKVKRL GKIQALASQL TDLWNLMDAT VEERQLFDHV TCNMSSTLDR VTVPGALALD
301: VIDQAEHEVE RLDQLKASRM KDIAFKRQTE LEDIYAQAHI AIDTSAARDR ILSVIDSSMF EPSELLADME NQILKAKEEA SSRKDILEKV DRWMLACEEE
401: SWLEDYSRDD NRYSATRGAH LNLKRAEKAR VLVNKIPAIV DMLVAKTQAW EQEHNTAFTY DGVALLAMLD EYRILRQEKE EEKRRMRDQK KINDQLAAEQ
501: EKLFGSKPSP ARPQSAKKLP GPRANGGAVN GTPNRRLSVQ QQNGVRSASR DGRRESVRPS APVNYVAIAK DDAASQASST

Best Arabidopsis Sequence Match ( AT5G55230.1 )
(BLAST)

001: MAVTDTESPH LGEITCGTLL EKLQEIWDEV GESDDERDKL LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TMSLGDKSLV GIPDKSSGTI
101: KEQLAAIAPA LEQLWQQKEE RVREFSDVQS QIQKICGDIA GGLSNEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLRK VLEFVSTVHD LCAVLGLDFL
201: STVTEVHPSL DEDTSVQSKS ISNETLSRLA KTVLTLKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISS SVDEVTVPGA LARDLIEQAE
301: VEVDRLDQLK ASRMKEIAFK KQSELEEIYA RAHVEVNPES ARERIMSLID SGNVEPTELL ADMDSQISKA KEEAFSRKDI LDRVEKWMSA CEEESWLEDY
401: NRDQNRYSAS RGAHLNLKRA EKARILVSKI PAMVDTLVAK TRAWEEEHSM SFAYDGVPLL AMLDEYGMLR QEREEEKRRL REQKKVQEQP HVEQESAFST
501: RPSPARPVSA KKTVGPRANN GGANGTHNRR LSLNANQNGS RSTAKEAGRR ETLNRPAAPT NYVAISKEEA ASSPVSGAAD HQVPASP

Arabidopsis Description

ATMAP65-1Microtubule-associated proteins 65-1 [Source:UniProtKB/TrEMBL;Acc:F4K3E4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.