Factsheet for PGSC0003DMT400033471

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g014490.1.1	Tomato	cytosol	91.46	92.59
PGSC0003DMT400057428	Potato	cytosol	83.62	82.62
KRH73815	Soybean	cytosol	77.35	76.29
VIT_19s0090g01230.t01	Wine grape	endoplasmic reticulum	73.34	75.18
KRH14311	Soybean	endoplasmic reticulum	76.66	74.58
GSMUA_Achr4P19380_001	Banana	cytosol	72.47	70.99
GSMUA_Achr7P06200_001	Banana	cytosol	72.47	70.75
KRH14315	Soybean	cytosol, endoplasmic reticulum	72.65	69.97
GSMUA_Achr3P13450_001	Banana	cytosol	71.78	69.95
GSMUA_Achr4P03890_001	Banana	cytosol	70.56	69.11
CDY17313	Canola	cytosol	70.38	69.06
Bra002922.1-P	Field mustard	cytosol	70.21	68.89
CDY19902	Canola	cytosol	70.21	68.89
Bra028986.1-P	Field mustard	cytosol	70.03	68.37
KRG98677	Soybean	cytosol	51.74	67.65
CDY20777	Canola	cytosol	69.34	67.57
AT4G26760.1	Thale cress	cytosol	67.94	67.47
Bra035564.1-P	Field mustard	cytosol	68.99	67.46
CDY06596	Canola	cytosol	68.82	67.06
CDY14300	Canola	nucleus	67.94	67.01
Bra026405.1-P	Field mustard	cytosol	66.38	66.96
Os06t0308300-01	Rice	golgi	67.07	66.84
Bra010428.1-P	Field mustard	cytosol	67.77	66.84
CDX89305	Canola	cytosol	66.2	66.78
KRH46253	Soybean	nucleus	36.41	66.35
AT5G55230.2	Thale cress	cytosol	71.08	66.23
CDY36737	Canola	nucleus	70.38	64.13
EER89674	Sorghum	cytosol	65.85	63.85
TraesCS7D01G224800.1	Wheat	cytosol	64.63	63.75
Os06t0611000-01	Rice	nucleus	63.59	62.82
TraesCS7D01G399400.1	Wheat	cytosol	63.41	62.76
TraesCS7A01G223100.1	Wheat	cytosol, nucleus, plastid	64.81	62.73
CDY12006	Canola	cytosol	70.03	62.42
TraesCS7B01G304900.2	Wheat	cytosol	63.07	62.41
TraesCS7A01G405500.1	Wheat	cytosol	63.07	62.41
HORVU7Hr1G094860.1	Barley	cytosol	62.89	62.24
EER88641	Sorghum	cytosol	61.5	60.86
HORVU7Hr1G045770.7	Barley	endoplasmic reticulum	64.81	60.78
TraesCS7B01G190000.1	Wheat	endoplasmic reticulum, golgi	64.81	60.49
HORVU6Hr1G070900.6	Barley	cytosol	62.02	60.34
TraesCS6A01G282800.1	Wheat	cytosol	61.32	59.97
TraesCS6D01G263300.1	Wheat	cytosol	61.32	59.97
TraesCS6B01G311200.1	Wheat	cytosol	61.5	59.73
Zm00001d037413_P002	Maize	cytosol	64.81	58.95
Os02t0720200-01	Rice	cytosol	60.28	58.74
CDX94287	Canola	nucleus	65.33	56.65
Zm00001d045864_P004	Maize	mitochondrion	64.29	54.51
CDX97365	Canola	nucleus	67.6	47.9
PGSC0003DMT400074853	Potato	cytosol	48.08	46.39
PGSC0003DMT400008510	Potato	plastid	39.9	45.71
PGSC0003DMT400058659	Potato	cytosol, plastid	45.12	43.09
PGSC0003DMT400075869	Potato	nucleus	44.43	42.57
PGSC0003DMT400079660	Potato	cytosol	46.69	35.97
PGSC0003DMT400070431	Potato	nucleus	42.68	35.3
PGSC0003DMT400033224	Potato	nucleus	40.07	30.46

Protein Annotations

Gene3D:1.20.58.1520	EntrezGene:102590077	MapMan:13.4.3.6	ncoils:Coil	GO:GO:0000226	GO:GO:0000910
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	UniProt:M1AZ76	InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	EnsemblPlantsGene:PGSC0003DMG400012857
PGSC:PGSC0003DMG400012857	EnsemblPlants:PGSC0003DMT400033471	PANTHER:PTHR19321	PANTHER:PTHR19321:SF15	UniParc:UPI0002965696	RefSeq:XP_006344873.1

Description

Microtubule-associated protein MAP65-1b [Source:PGSC_GENE;Acc:PGSC0003DMG400012857]

Coordinates

chr12:+:9482047..9486859

Molecular Weight (calculated)

64531.9 Da

IEP (calculated)

4.674

GRAVY (calculated)

-0.596

Length

574 amino acids

Sequence
(BLAST)

001: MGGVDAQNGE TSCSFLLQQL QQIWDEVGET DEDRDKMLLQ IDQECLDVYN RKVDQAVKSR DHLLQALSDA KVEFSRLLSA LGEKTYDGIP EKNSGSIKEQ
101: LAAIAPALEK LWKQKDERVK EFLDVQSQIE KISSEIAGTS EQVESPKVDE SDLSLKKLDE FHAQLQDLQK EKSERLHKVL EFVSTIHDLC AVLGIDFFSA
201: VTEVHPSLND STGVQSKSIS NDTLSSLART VLALEEDKKQ RLQKLQELAT QLIDLWNLMD TTEEERSLFD HVTCNISASV DEVSIPGALA LDLIEQAEVE
301: VERLDQLKAS RMKEIAFKKQ AVLEEIFACA HIEIDSEAAQ NKIMALIDSV NTESAELLAD MDNQIVKAKE EADSRKEILD KVEKWMASCE EESWLEDYNR
401: DQNRYNASRG AHLNLKRAEK ARILVGKIPA LVDSLIAKTR AWEQDRDTIF TYDGVPLLAM LDEYMMLRQD REEEKRKLRD QKKFHEQINE QETPFGSTPS
501: AARPLGTKKV VGPGANGSGN RRLSLNSHQN GSRSTTKDGK RDHSRTVAPV NYVAISKDDA DSHISGTEHI PSTP

Best Arabidopsis Sequence Match ( AT5G55230.1 )
(BLAST)

001: MAVTDTESPH LGEITCGTLL EKLQEIWDEV GESDDERDKL LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TMSLGDKSLV GIPDKSSGTI
101: KEQLAAIAPA LEQLWQQKEE RVREFSDVQS QIQKICGDIA GGLSNEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLRK VLEFVSTVHD LCAVLGLDFL
201: STVTEVHPSL DEDTSVQSKS ISNETLSRLA KTVLTLKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISS SVDEVTVPGA LARDLIEQAE
301: VEVDRLDQLK ASRMKEIAFK KQSELEEIYA RAHVEVNPES ARERIMSLID SGNVEPTELL ADMDSQISKA KEEAFSRKDI LDRVEKWMSA CEEESWLEDY
401: NRDQNRYSAS RGAHLNLKRA EKARILVSKI PAMVDTLVAK TRAWEEEHSM SFAYDGVPLL AMLDEYGMLR QEREEEKRRL REQKKVQEQP HVEQESAFST
501: RPSPARPVSA KKTVGPRANN GGANGTHNRR LSLNANQNGS RSTAKEAGRR ETLNRPAAPT NYVAISKEEA ASSPVSGAAD HQVPASP

Arabidopsis Description

ATMAP65-1Microtubule-associated proteins 65-1 [Source:UniProtKB/TrEMBL;Acc:F4K3E4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.