Factsheet for TraesCS6A01G282800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G263300.1	Wheat	cytosol	98.13	98.13
HORVU6Hr1G070900.6	Barley	cytosol	96.59	96.1
TraesCS6B01G311200.1	Wheat	cytosol	96.42	95.77
Os02t0720200-01	Rice	cytosol	78.19	77.93
TraesCS7A01G223100.1	Wheat	cytosol, nucleus, plastid	71.72	70.99
KRH73815	Soybean	cytosol	62.69	63.23
KRH14311	Soybean	endoplasmic reticulum	62.18	61.86
Solyc07g064970.2.1	Tomato	nucleus	61.16	61.79
PGSC0003DMT400057428	Potato	cytosol	60.99	61.62
PGSC0003DMT400033471	Potato	cytosol	59.97	61.32
Solyc12g014490.1.1	Tomato	cytosol	58.09	60.14
VIT_19s0090g01230.t01	Wine grape	endoplasmic reticulum	56.39	59.11
AT4G26760.1	Thale cress	cytosol	57.92	58.82
KRH14315	Soybean	cytosol, endoplasmic reticulum	59.45	58.56
CDY19902	Canola	cytosol	57.92	58.12
CDY17313	Canola	cytosol	57.75	57.95
Bra002922.1-P	Field mustard	cytosol	57.75	57.95
CDY14300	Canola	nucleus	57.41	57.9
Bra028986.1-P	Field mustard	cytosol	57.92	57.82
Bra026405.1-P	Field mustard	cytosol	55.88	57.65
KRG98677	Soybean	cytosol	43.1	57.63
TraesCS7A01G405500.1	Wheat	cytosol	56.9	57.59
Bra035564.1-P	Field mustard	cytosol	57.58	57.58
Bra010428.1-P	Field mustard	cytosol	57.07	57.56
CDX89305	Canola	cytosol	55.54	57.29
KRH46253	Soybean	nucleus	30.66	57.14
CDY20777	Canola	cytosol	56.9	56.71
CDY06596	Canola	cytosol	56.9	56.71
AT5G55230.2	Thale cress	cytosol	58.94	56.17
CDY36737	Canola	nucleus	58.43	54.44
CDY12006	Canola	cytosol	57.92	52.8
CDX94287	Canola	nucleus	55.03	48.79
CDX97365	Canola	nucleus	56.73	41.11
TraesCS5A01G233900.1	Wheat	nucleus	40.2	40.27
TraesCS1A01G256800.1	Wheat	nucleus	39.01	39.76
TraesCS4A01G074200.2	Wheat	nucleus	38.84	37.32
TraesCS7A01G260100.2	Wheat	nucleus	37.48	37.29
TraesCS6A01G089500.2	Wheat	nucleus	33.05	35.4
TraesCS1A01G378900.1	Wheat	cytosol	40.37	35.01
TraesCS4A01G263800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.97	35.0
TraesCS3A01G264600.1	Wheat	cytosol	40.55	34.54

Protein Annotations

EnsemblPlants:TraesCS6A01G282800.1	EnsemblPlantsGene:TraesCS6A01G282800	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1
ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF9	PFAM:PF03999	SEG:seg	MapMan:13.4.3.6

Description

No Description!

Coordinates

chr6A:+:514031674..514036145

Molecular Weight (calculated)

66034.3 Da

IEP (calculated)

5.258

GRAVY (calculated)

-0.666

Length

587 amino acids

Sequence
(BLAST)

001: MDALHGQTSC GSLLQKLQLV WDEVGENDED RDKVLFQLDQ ECLDVYKRKV DQALKSRDLL LQALDYSKME LARLASALGE KSIATSPEKT ARTIKQQLAA
101: LAPTLEQLGK QKKERINKFA DIMSRIEQIR GEIAGNLEIG QQVAIPQINE DDLTDEKLRD FQSQLQELEK KKRERLKKVL EHVSTVQDLC SVLKMEHFSI
201: ITEVHESLDD SVGKDHKSIS NDTLSKLDRT IATLNEDKTL RLKKLQELAT QLNDLWDLMD TPTEERSLFD HVTCNRTASA EEVTAPGALA LDIINQAEIE
301: VQRLDELKYS KMKEIAFKKQ TTLEDIYAGA HIVIDTAAAH DKIFALIESG SMEPTELIAD MDSQILKAKE EALSRKEILD KVERWISACE EESWLEDYNR
401: DDNRYNSGRG AHLNLKRAEK ARIQVNKIPG LVETLVAKTT AWEENHGLSF TYDGVPLLAM LDEYVMLRQE KEEEKRKMRE QKRYTEQLLN IDREGPFGTR
501: VSPYRVASTK KVPSPKPNGS TTNGSPGRRL SMSTQQNESK SSRSAGKKAA AVAAPPKTPA SPNEAATAKE DNASIQHTDA DPVPCSP

Best Arabidopsis Sequence Match ( AT4G26760.1 )
(BLAST)

001: MAVTEAENPL LGEITCGTLL QKLQEIWDEV GESDEERDKL LLQIEEECLN VYKKKVELAA KSRAELLQTL SDATVELSNL TTALGEKSYI DIPDKTSGTI
101: KEQLSAIAPA LEQLWQQKEE RVRAFSDVQS QIQKICEEIA GGLNNGPHVV DETDLSLKRL DDFQRKLQEL QKEKSDRLQK VLEFVSTVHD LCAVLRLDFL
201: STVTEVHPSL DEANGVQTKS ISNETLARLA KTVLTLKEDK MQRLKKLQEL ATQLTDLWNL MDTSDEEREL FDHVTSNISA SVHEVTASGA LALDLIEQAE
301: VEVDRLDQLK SSRMKEIAFK KQSELEEIYA RAHIEIKPEV VRERIMSLID AGNTEPTELL ADMDSQIAKA KEEAFSRKEI LDRVEKWMSA CEEESWLEDY
401: NRDQNRYSAS RGAHLNLKRA EKARILVSKI TAMVDTLIAK TRAWEEENSM SFEYDGVPLL AMLDEYTMLR QEREDEKRRL KEQKKQQEQP HTDQESAFGS
501: KPSPARPVSA KKPVGTRVNG GGLNETPMRR LSMNSNQNGS KSKRDSLNKI ASPSNIVANT KDDAASPVSR ADPVMASP

Arabidopsis Description

MAP65-2MAP65-2 [Source:UniProtKB/TrEMBL;Acc:A0A178V4W3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.