Factsheet for HORVU6Hr1G070900.6

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G311200.1	Wheat	cytosol	96.78	96.62
TraesCS6A01G282800.1	Wheat	cytosol	96.1	96.59
TraesCS6D01G263300.1	Wheat	cytosol	95.76	96.25
Os02t0720200-01	Rice	cytosol	78.47	78.61
HORVU7Hr1G045770.7	Barley	endoplasmic reticulum	71.69	69.12
KRH73815	Soybean	cytosol	63.05	63.92
Solyc07g064970.2.1	Tomato	nucleus	61.69	62.65
KRH14311	Soybean	endoplasmic reticulum	62.54	62.54
PGSC0003DMT400057428	Potato	cytosol	61.53	62.48
PGSC0003DMT400033471	Potato	cytosol	60.34	62.02
Solyc12g014490.1.1	Tomato	cytosol	58.14	60.49
VIT_19s0090g01230.t01	Wine grape	endoplasmic reticulum	56.95	60.0
KRH14315	Soybean	cytosol, endoplasmic reticulum	60.0	59.4
AT4G26760.1	Thale cress	cytosol	57.63	58.82
KRG98677	Soybean	cytosol	43.56	58.54
HORVU7Hr1G094860.1	Barley	cytosol	57.46	58.45
CDY19902	Canola	cytosol	57.8	58.29
CDY17313	Canola	cytosol	57.63	58.12
Bra002922.1-P	Field mustard	cytosol	57.63	58.12
Bra028986.1-P	Field mustard	cytosol	57.8	57.99
Bra026405.1-P	Field mustard	cytosol	55.76	57.82
Bra035564.1-P	Field mustard	cytosol	57.46	57.75
CDY14300	Canola	nucleus	56.95	57.73
CDX89305	Canola	cytosol	55.42	57.47
KRH46253	Soybean	nucleus	30.68	57.46
Bra010428.1-P	Field mustard	cytosol	56.61	57.39
CDY20777	Canola	cytosol	57.12	57.22
CDY06596	Canola	cytosol	56.95	57.05
AT5G55230.2	Thale cress	cytosol	58.81	56.33
CDY36737	Canola	nucleus	58.31	54.6
CDY12006	Canola	cytosol	57.8	52.95
CDX94287	Canola	nucleus	54.58	48.64
CDX97365	Canola	nucleus	56.27	40.99
HORVU1Hr1G063330.5	Barley	golgi	38.98	36.28
HORVU7Hr1G054130.4	Barley	mitochondrion	37.63	33.38
HORVU1Hr1G083810.7	Barley	cytosol	38.47	33.19
HORVU4Hr1G064580.2	Barley	endoplasmic reticulum, nucleus, plastid	38.98	31.86
HORVU3Hr1G063620.1	Barley	plastid	39.32	31.1
HORVU4Hr1G008440.3	Barley	nucleus	36.95	30.83

Protein Annotations

EnsemblPlants:HORVU6Hr1G070900.6	EnsemblPlantsGene:HORVU6Hr1G070900	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1
ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF9	PFAM:PF03999	SEG:seg	UniParc:UPI000B461D67
UniProt:A0A287ULR9	MapMan:13.4.3.6	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:493969717..493974078

Molecular Weight (calculated)

66363.8 Da

IEP (calculated)

5.430

GRAVY (calculated)

-0.682

Length

590 amino acids

Sequence
(BLAST)

001: MDALQGQTSC GSLLQKLQQL VWDEVGESDE DRDKVLFQLD QECLDVYKRK VDQALKSRDL LLQALDYSKM ELARLASALG EKSIATSPEK TARTIKQQLA
101: ALAPTLEQLG KQKKERIKKF ADIMSRIEQI RGEIAGNLEI GQQVPIPQIN EDDLTDEKLR DFQSQLQELE KKKRERLKKV LEHVSTVQDL CSVLKMEHFS
201: IITEVHDSLD DSVGKDHKSI SNDTLSKLDR TIATLNKDKT LRLKKLQELA TQLNDLWDLM DTPMEERSLF DHVTCNRTAS VEEVTAPGAL ALDIINQAEI
301: EVQRLDGLKY SKMKEIAYKK QTTLEDIYAG AHIVIDTAAA HDKIFALIES GNMEPTELIA DMDNQIVKAK EEALSRKEIL DKVERWISAC EEESWLEDYN
401: RDDNRYNSGR GAHLNLKRAE KARIQVNKIP GLVETLVAKT TSWEENHGLP FTYDGVPLLA MLDEYVMLRQ EKEEEKRKMR EQKRYTEQLL NIDREGPFGT
501: RVSPYRVASA KKVPSPKPNG SVTNGSPGRR LSMSTQQNES KSSRSAGKDG KKAAAAAAPK TPASPNEAAT AKEDDASIQH TDADPVPCSP

Best Arabidopsis Sequence Match ( AT1G14690.1 )
(BLAST)

001: MLEIESPTSL CFRTNTTCNA LLRELQKIWV DIGESDAEKD RMLMELEKEC LEIYRRKVDE AANSKAQLHQ SLVSIEAEIA SLLAALGVFN SHSPMKAKEG
101: SKSLKEKLAA VRPMLEDLRL QKDERMKQFV DIKAQIEKMS GEISGYSDQL NKTMVGSLAL DEQDLTLRKL NEYQTHLRSL QKEKSDRLNK VLDYVNEVHT
201: LCGVLGVDFG QTVSEVHPSL HRTDHEQSTN ISDDTLDGLH HMIHKLKTER SVRFQKLKDV AGSLFELWNL MDTSQEERTK FASVSYVVRS SESDITEPNI
301: LSSETIEQVS AEVDCFNKLK ASRMKELVMK RRTELENLCR LAHIEADTST SLEKSTALID SGLVDPSELL TNIELHINKI KEEAHSRKEI IDRIDRWLSA
401: CEEENWLEEY NQDETRYSAG RGGHVNLKHA ERARITVNKI PSMVDNLIKK TLLWEDETRK SFLYDGVRLV SILEDYKLTR KQQEEEKRRY RDQKKMQDLL
501: IKRRESIYGS KPSPRRSNSV RKTNGYNGDA SVPPTPRRNS AGATNNDIMT TPRSYSSHRQ NGYFKEVRRL STAPLNFVAI PKEDSVSTYT SVCGSEPDSP
601: LYN

Arabidopsis Description

MAP65-765-kDa microtubule-associated protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L836]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.