CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028986.1-P	Field mustard	cytosol	91.11	97.62
CDY12006	Canola	cytosol	95.87	93.79
CDY19902	Canola	cytosol	86.83	93.5
CDY17313	Canola	cytosol	86.67	93.33
CDY06596	Canola	cytosol	83.33	89.13
CDY20777	Canola	cytosol	82.86	88.62
AT5G55230.2	Thale cress	cytosol	86.51	88.47
CDY14300	Canola	nucleus	75.08	81.27
CDX89305	Canola	cytosol	71.11	78.73
KRH73815	Soybean	cytosol	71.11	76.98
KRH14311	Soybean	endoplasmic reticulum	70.79	75.59
VIT_19s0090g01230.t01	Wine grape	endoplasmic reticulum	64.92	73.04
Solyc07g064970.2.1	Tomato	nucleus	65.87	71.43
PGSC0003DMT400057428	Potato	cytosol	65.87	71.43
GSMUA_Achr4P19380_001	Banana	cytosol	65.87	70.82
KRH14315	Soybean	cytosol, endoplasmic reticulum	66.98	70.81
GSMUA_Achr3P13450_001	Banana	cytosol	66.19	70.8
PGSC0003DMT400033471	Potato	cytosol	64.13	70.38
KRG98677	Soybean	cytosol	48.89	70.16
Solyc12g014490.1.1	Tomato	cytosol	62.86	69.84
GSMUA_Achr7P06200_001	Banana	cytosol	65.08	69.73
GSMUA_Achr4P03890_001	Banana	cytosol	64.76	69.62
CDX94287	Canola	nucleus	72.54	69.03
KRH46253	Soybean	nucleus	33.02	66.03
Os06t0308300-01	Rice	golgi	60.0	65.62
Os06t0611000-01	Rice	nucleus	59.84	64.89
TraesCS7D01G399400.1	Wheat	cytosol	59.52	64.66
TraesCS7B01G304900.2	Wheat	cytosol	59.21	64.31
EER89674	Sorghum	cytosol	60.16	64.02
TraesCS7A01G405500.1	Wheat	cytosol	58.89	63.97
HORVU7Hr1G094860.1	Barley	cytosol	58.89	63.97
TraesCS7D01G224800.1	Wheat	cytosol	58.89	63.75
EER88641	Sorghum	cytosol	58.25	63.28
TraesCS7A01G223100.1	Wheat	cytosol, nucleus, plastid	58.89	62.56
HORVU7Hr1G045770.7	Barley	endoplasmic reticulum	59.21	60.95
TraesCS7B01G190000.1	Wheat	endoplasmic reticulum, golgi	59.37	60.81
TraesCS6D01G263300.1	Wheat	cytosol	54.92	58.94
Zm00001d037413_P002	Maize	cytosol	58.73	58.64
TraesCS6A01G282800.1	Wheat	cytosol	54.44	58.43
HORVU6Hr1G070900.6	Barley	cytosol	54.6	58.31
CDX97365	Canola	nucleus	74.76	58.15
Os02t0720200-01	Rice	cytosol	54.13	57.89
TraesCS6B01G311200.1	Wheat	cytosol	54.13	57.7
Zm00001d045864_P004	Maize	mitochondrion	58.41	54.36
CDX81663	Canola	cytosol	42.86	45.15
CDY17624	Canola	nucleus	43.49	45.07
CDY33748	Canola	cytosol	42.22	44.56
CDY03090	Canola	nucleus	42.06	42.67
CDY00270	Canola	nucleus	36.19	42.3
CDX86911	Canola	nucleus	36.03	42.12
CDY18372	Canola	nucleus	39.05	41.69
CDX84899	Canola	extracellular, nucleus, plastid	37.94	41.64
CDX93308	Canola	nucleus	38.89	41.6
CDY27637	Canola	cytosol	37.46	41.4
CDY15798	Canola	endoplasmic reticulum, golgi	27.46	41.0
CDX87240	Canola	nucleus	34.92	40.67
CDY16786	Canola	nucleus	34.92	40.52
CDY62713	Canola	cytosol	37.62	34.65
CDX89081	Canola	cytosol	37.14	34.11
CDY09401	Canola	endoplasmic reticulum, golgi, plasma membrane	20.63	22.85

Protein Annotations

Gene3D:1.20.58.1520	MapMan:13.4.3.6	GO:A0A078HFZ6	UniProt:A0A078HFZ6	EnsemblPlants:CDY36737	ProteinID:CDY36737
ProteinID:CDY36737.1	ncoils:Coil	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
EnsemblPlantsGene:GSBRNA2T00062557001	InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF15	UniParc:UPI0004EE134A
SEG:seg	:	:	:	:	:

Description

BnaA03g11490DBnaA03g11490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFZ6]

Coordinates

chrLK032383:+:49621..54206

Molecular Weight (calculated)

70811.1 Da

IEP (calculated)

4.618

GRAVY (calculated)

-0.656

Length

630 amino acids

Sequence
(BLAST)

001: MRFSTDELVK EVENSITEAS DLQEEEEECW KCQSRKPFDF VTMVVTDTES THLGEITCGT LLQKLQEIWD EVGESDEERD KLLLQIEQEC LHVYKRKVEQ
101: AAKSRAELLQ TLSDANAELS SLTTSLGDKT FVNDIPDKSS GTIKEQLAAI APALEQLWQQ KDERVREFSD VQSQIQKICG EIAGGLSSEV PIVDESDLSL
201: KKLDDFNSQL QELQKEKSDR LQKVLEFVSS VHDLCAVLGL DFLSTVKEVH PSLDEETSVQ AKSISNETLS RLAKTVLTLK DDKKQRLQKL QELATQLIDL
301: WNLMDTPDEE RELFDHVTCN ISASVDEVTT PGALAHDLIK QAEVEVDRLD QLKASRMKEI AFKKQTELEE IYVRAHVETN PESARERIMS LIDSGNVEPT
401: ELLADMDSQI AKAKEEAFSR KDILDRVEKW MSACEEESWL EDYNRDQNRY SASRGAHLNL KRAEKARVLV SKIPAMVDTL VAKTRAWEEE HNMSFAYDGV
501: PLLAMLDEYG MLRQEREDEK RRLREQKKVQ EQPHVEQDTA FSTRPSPARP VSAKKPVGAR ANNGVGANGT PNRRLSLNAN QNGSRSVAKE GGRRESLNRP
601: AAPTNYVAIS KEEAASSPGT GAADQVPASP

Best Arabidopsis Sequence Match ( AT5G55230.1 )
(BLAST)

001: MAVTDTESPH LGEITCGTLL EKLQEIWDEV GESDDERDKL LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TMSLGDKSLV GIPDKSSGTI
101: KEQLAAIAPA LEQLWQQKEE RVREFSDVQS QIQKICGDIA GGLSNEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLRK VLEFVSTVHD LCAVLGLDFL
201: STVTEVHPSL DEDTSVQSKS ISNETLSRLA KTVLTLKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISS SVDEVTVPGA LARDLIEQAE
301: VEVDRLDQLK ASRMKEIAFK KQSELEEIYA RAHVEVNPES ARERIMSLID SGNVEPTELL ADMDSQISKA KEEAFSRKDI LDRVEKWMSA CEEESWLEDY
401: NRDQNRYSAS RGAHLNLKRA EKARILVSKI PAMVDTLVAK TRAWEEEHSM SFAYDGVPLL AMLDEYGMLR QEREEEKRRL REQKKVQEQP HVEQESAFST
501: RPSPARPVSA KKTVGPRANN GGANGTHNRR LSLNANQNGS RSTAKEAGRR ETLNRPAAPT NYVAISKEEA ASSPVSGAAD HQVPASP

Arabidopsis Description

ATMAP65-1Microtubule-associated proteins 65-1 [Source:UniProtKB/TrEMBL;Acc:F4K3E4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.