Factsheet for Os06t0308300-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

golgi: 25047511

msms PMID: 25047511 doi

Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han

Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G224800.1	Wheat	cytosol	91.49	90.55
EER89674	Sorghum	cytosol	91.49	89.02
TraesCS7A01G223100.1	Wheat	cytosol, nucleus, plastid	91.32	88.7
HORVU7Hr1G045770.7	Barley	endoplasmic reticulum	91.49	86.11
TraesCS7B01G190000.1	Wheat	endoplasmic reticulum, golgi	91.84	86.02
Zm00001d037413_P002	Maize	cytosol	89.93	82.09
Zm00001d045864_P004	Maize	mitochondrion	88.89	75.63
Os02t0720200-01	Rice	cytosol	72.92	71.31
KRH73815	Soybean	cytosol	69.97	69.24
PGSC0003DMT400057428	Potato	cytosol	69.44	68.85
Solyc07g064970.2.1	Tomato	nucleus	69.27	68.67
KRH14311	Soybean	endoplasmic reticulum	69.1	67.46
PGSC0003DMT400033471	Potato	cytosol	66.84	67.07
Solyc12g014490.1.1	Tomato	cytosol	64.24	65.26
VIT_19s0090g01230.t01	Wine grape	endoplasmic reticulum	62.67	64.46
AT4G26760.1	Thale cress	cytosol	64.58	64.36
CDY14300	Canola	nucleus	64.93	64.26
KRG98677	Soybean	cytosol	48.78	64.01
Bra028986.1-P	Field mustard	cytosol	65.1	63.78
KRH14315	Soybean	cytosol, endoplasmic reticulum	65.97	63.76
Bra010428.1-P	Field mustard	cytosol	64.24	63.57
Os06t0611000-01	Rice	nucleus	64.06	63.51
KRH46253	Soybean	nucleus	34.72	63.49
CDX89305	Canola	cytosol	62.33	63.09
CDY19902	Canola	cytosol	64.06	63.08
Bra026405.1-P	Field mustard	cytosol	62.15	62.92
Bra002922.1-P	Field mustard	cytosol	63.89	62.91
CDY17313	Canola	cytosol	63.89	62.91
Bra035564.1-P	Field mustard	cytosol	63.89	62.69
CDY20777	Canola	cytosol	63.89	62.48
CDY06596	Canola	cytosol	63.02	61.63
AT5G55230.2	Thale cress	cytosol	65.62	61.36
CDY36737	Canola	nucleus	65.62	60.0
CDY12006	Canola	cytosol	64.93	58.07
CDX94287	Canola	nucleus	61.28	53.32
CDX97365	Canola	nucleus	63.72	45.31
Os09t0450300-01	Rice	nucleus	43.4	42.02
Os08t0531100-01	Rice	cytosol	35.42	41.8
Os05t0409400-01	Rice	cytosol, nucleus, plastid	43.4	41.39
Os03t0237600-04	Rice	nucleus	43.06	40.66
Os03t0719000-01	Rice	cytosol, nucleus	31.25	38.14
Os01t0685900-01	Rice	cytosol	45.14	37.74
Os02t0126300-01	Rice	plasma membrane	35.24	36.31
Os05t0552900-01	Rice	cytosol	42.71	33.65
Os01t0685800-01	Rice	mitochondrion	0.17	0.18

Protein Annotations

Gene3D:1.20.58.1520	MapMan:13.4.3.6	EntrezGene:4340849	EMBL:AK101549	ProteinID:BAD62191.1	ProteinID:BAD62311.1
ProteinID:BAF19389.1	ProteinID:BAS97423.1	ncoils:Coil	GO:GO:0000226	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1
EnsemblPlantsGene:Os06g0308300	EnsemblPlants:Os06t0308300-01	PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF9	UniProt:Q5Z4M1
UniParc:UPI0000450792	RefSeq:XP_015640906.1	:	:	:	:

Description

Similar to 65kD microtubule associated protein. (Os06t0308300-01);Similar to microtubule-associated protein MAP65-1a. (Os06t0308300-02);Similar to 65kD microtubule associated protein. (Os06t0308300-03)

Coordinates

chr6:-:11696905..11701293

Molecular Weight (calculated)

64374.1 Da

IEP (calculated)

4.883

GRAVY (calculated)

-0.631

Length

576 amino acids

Sequence
(BLAST)

001: MAGDITCGSL LQKLQLIWDE VGESDEDRDK VLYQLDQECL DVYKRKVDQA TDSRDLLIQA LDDSKIELAR LLSALGEKAI ARTPEKTSGT IKQQLAAIAP
101: TLEKLNKQKN ERVREFVNVQ SQIDQICGEI AGTTEVGEKV ATPQVNEDDL TLERLEEFRS QLQELEKEKS NRLEKVLDYV SMIHNLCTVL GMDFLSTVTE
201: VHPSLDDSIG DNCKSISNDT LSKLDKTVAT LNEDKKSRLS KLQELAGQLY DLWDLMDAPM QERSMFDHVT CNRSASVDKV TAPGALALDL IEQAEVEVQR
301: LDQLKYSKMK EIAFKKQTEL EDIYAGAHMV IDTAAAHEKI LALIEAGNIE PSELIADMES QISKAKEEAL SRKEILDKVE RWMSACEEES WLEDYNRDDN
401: RYNSSRGAHL NLKRAEKARI LVNKIPALVE TLVAKTRAWE ESRGLSFMYD GVPLLAMLDE YVMLRQEREE DKKRMREQKR YIEQQLNTDH EGPFGSRVSP
501: NRPVSAKKVP GAKSNGSANG TPPNRRLSVS GHQNGRSGGK DGKRDSAKTA SPGNVAAAKE DASSHISGTD PVPSTP

Best Arabidopsis Sequence Match ( AT5G55230.1 )
(BLAST)

001: MAVTDTESPH LGEITCGTLL EKLQEIWDEV GESDDERDKL LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TMSLGDKSLV GIPDKSSGTI
101: KEQLAAIAPA LEQLWQQKEE RVREFSDVQS QIQKICGDIA GGLSNEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLRK VLEFVSTVHD LCAVLGLDFL
201: STVTEVHPSL DEDTSVQSKS ISNETLSRLA KTVLTLKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISS SVDEVTVPGA LARDLIEQAE
301: VEVDRLDQLK ASRMKEIAFK KQSELEEIYA RAHVEVNPES ARERIMSLID SGNVEPTELL ADMDSQISKA KEEAFSRKDI LDRVEKWMSA CEEESWLEDY
401: NRDQNRYSAS RGAHLNLKRA EKARILVSKI PAMVDTLVAK TRAWEEEHSM SFAYDGVPLL AMLDEYGMLR QEREEEKRRL REQKKVQEQP HVEQESAFST
501: RPSPARPVSA KKTVGPRANN GGANGTHNRR LSLNANQNGS RSTAKEAGRR ETLNRPAAPT NYVAISKEEA ASSPVSGAAD HQVPASP

Arabidopsis Description

ATMAP65-1Microtubule-associated proteins 65-1 [Source:UniProtKB/TrEMBL;Acc:F4K3E4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.