Factsheet for Os01t0685800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

mitochondrion: 16429260
plastid: 17189339
mitochondrion: 19010998
mitochondrion: 19217306
nucleus: 19621931
mitochondrion: 23027867
extracellular: 24083427
plastid: 27126603
plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 16429260 doi

KA Howell, AH Millar, J Whelan

ARC Centre of Excellence in Plant Energy Biology, CMS Building M310, University of Western Australia, 35 Stirling Hwy, Perth, WA 6009, Australia.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

msms PMID: 19217306 doi

X Chen, Y Wang, J Li, A Jiang, Y Cheng, W Zhang

Department of Biochemistry and Molecular Biology, Nanjing Agricultural University, Weigang, China.

msms PMID: 27126603 doi

Y Wang, K Ji, S Shen, H Chen

Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China. Electronic address: chenh@ibcas.ac.cn., Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; University of Chinese Academy of Sciences, Beijing 100049, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0552900-01	Rice	cytosol	3.77	2.87
Zm00001d047347_P031	Maize	cytosol	0.72	0.74
Zm00001d030102_P004	Maize	cytosol	0.72	0.67
Os08t0531100-01	Rice	cytosol	0.36	0.41
Os06t0611000-01	Rice	nucleus	0.36	0.34
Os05t0409400-01	Rice	cytosol, nucleus, plastid	0.36	0.33
Os03t0237600-04	Rice	nucleus	0.36	0.33
Os01t0685900-01	Rice	cytosol	0.36	0.29
OQU77968	Sorghum	cytosol	0.18	0.27
Os02t0126300-01	Rice	plasma membrane	0.18	0.18
Os06t0308300-01	Rice	golgi	0.18	0.17
Os02t0720200-01	Rice	cytosol	0.18	0.17
Os09t0450300-01	Rice	nucleus	0.18	0.17
Os03t0719000-01	Rice	cytosol, nucleus	0.0	0.0
Zm00001d029060_P002	Maize	cytosol, nucleus, plasma membrane	0.0	0.0
Zm00001d030008_P005	Maize	cytosol	0.0	0.0
EES11428	Sorghum	nucleus	0.0	0.0

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	MapMan:2.4.6.2.2	Gene3D:2.40.10.170	Gene3D:3.40.50.300
EntrezGene:4324151	InterPro:AAA+_ATPase	InterPro:ATP_synth_F1_beta_su	InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf
InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	ProteinID:BAF05814.1	ProteinID:BAS73747.1	GO:GO:0000166
GO:GO:0000275	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139
GO:GO:0006754	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0045261	GO:GO:0046034
GO:GO:0046933	GO:GO:0099132	GO:GO:1902600	InterPro:IPR024034	HAMAP:MF_01347	EnsemblPlantsGene:Os01g0685800
EnsemblPlants:Os01t0685800-01	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PFAM:PF11421	PIRSF:PIRSF039072
ScanProsite:PS00152	PANTHER:PTHR15184	PANTHER:PTHR15184:SF44	UniProt:Q0JKB4	SMART:SM00382	SUPFAM:SSF47917
SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR01039	UniParc:UPI0000DD8C84	RefSeq:XP_015620979.1	SEG:seg

Description

beta subunit of ATP synthaseSimilar to ATP synthase beta chain, mitochondrial precursor (EC 3.6.3.14). (Os01t0685800-01);Similar to ATP synthase subunit beta, mitochondrial. (Os01t0685800-02)

Coordinates

chr1:+:28277699..28281938

Molecular Weight (calculated)

59466.4 Da

IEP (calculated)

6.522

GRAVY (calculated)

-0.082

Length

557 amino acids

Sequence
(BLAST)

001: MATRRALTSV LRSASRLRAA SPSPCPRRAP LHPHRRPSPA GFLLNRAAAA YASSAAAQAA PAPPPASGKA TGGGKITDEF TGAGAVGQVC QVIGAVVDVR
101: FDEGLPPILT ALEVLDHNIR LVLEVAQHLG ENMVRTIAMD GTEGLVRGQR VLNTGSPITV PVGRATLGRI MNVIGEPIDE KGDITTNHFL PIHREAPAFV
201: EQATEQQILV TGIKVVDLLA PYQRGGKIGL FGGAGVGKTV LIMELINNVA KAHGGFSVFA GVGERTREGN DLYREMIESG VIKLGDKQSE SKCALVYGQM
301: NEPPGARARV GLTGLTVAEH FRDAEGQDVL LFIDNIFRFT QANSEVSALL GRIPSAVGYQ PTLATDLGGL QERITTTKKG SITSVQAIYV PADDLTDPAP
401: ATTFAHLDAT TVLSRQISEL GIYPAVDPLD STSRMLSPHV LGEDHYNTAR GVQKVLQNYK NLQDIIAILG MDELSEDDKL TVARARKIQR FLSQPFHVAE
501: VFTGAPGKYV ELKESVQSFQ GVLDGKYDDL PEQSFYMVGG IDEVIAKAEK IAKESAS

Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)

001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA

Arabidopsis Description

ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.