CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU77968	Sorghum	cytosol	69.1	54.22
Os01t0685900-01	Rice	cytosol	29.17	12.19
KXG21994	Sorghum	cytosol	23.61	11.89
EER89674	Sorghum	cytosol	24.31	11.82
EES06214	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.96	11.79
OQU87349	Sorghum	golgi, vacuole	28.47	11.47
EER88641	Sorghum	cytosol	22.92	11.38
EER92583	Sorghum	cytosol	23.96	11.29
EER98994	Sorghum	nucleus	22.92	11.07
Zm00001d030008_P005	Maize	cytosol	17.71	10.9
Zm00001d029060_P002	Maize	cytosol, nucleus, plasma membrane	17.36	10.89
EES15312	Sorghum	cytosol	19.79	9.64
Zm00001d047347_P031	Maize	cytosol	16.67	8.82
EER90980	Sorghum	cytosol	19.1	8.69
Zm00001d030102_P004	Maize	cytosol	16.32	7.93
Os01t0685800-01	Rice	mitochondrion	0.0	0.0

Protein Annotations

MapMan:35.2	EntrezGene:8066784	UniProt:C5YG21	EnsemblPlants:EES11428	ProteinID:EES11428	ProteinID:EES11428.1
GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	PANTHER:PTHR19321
PANTHER:PTHR19321:SF7	EnsemblPlantsGene:SORBI_3006G215800	unigene:Sbi.18695	UniParc:UPI0001A86F67	RefSeq:XP_002447100.1	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:56374573..56382035

Molecular Weight (calculated)

32635.7 Da

IEP (calculated)

4.800

GRAVY (calculated)

-0.536

Length

288 amino acids

Sequence
(BLAST)

001: MDRMEKTERF VQLKKLAGSV ISYWSIISVP VEEKLNFIPL LHYAKAESVD EIPEHLAVSE DFMKTVENES NRLEKIVAEM IVRKKSKLAQ IYQRSHLESP
101: FAGQEPSDTS VAFKLVKEQI SIAKAVSMER QDIVTRVELL QSACDEIEWY VSPDFNSSST EDHQRVARGK VLVDFFPKMM EDLEDKVTLW NLKEGKLTFS
201: FDGVDVRQKV EAMKTSYARH IKTDMDAVPG GIDIQQLVVP RRPRTPMVPV QVNEPPPPQP SDGDDSMASS GSKSDSKDSD YHPSDSEE

Best Arabidopsis Sequence Match ( AT5G51600.1 )
(BLAST)

001: MASVQKDPIL QVETTCGSLL FELQIIWDEV GETETDRDQM LLELERECLE VYRRKVDQAN RCRAQLRQAI ADAEAQLAAI CSAMGERPVH IRQSDQSVGS
101: LKQELGRILP ELEEMQKRKV ERRNQFIVVM EQIDSITNDI KGQGELVHSE PLIDETNLSM RKLEELHCQL QVLQKEKIDR VETIRKHLCT LYSHCSVLGM
201: DFNEVVGQVN PTLSDPEGPR SLSDHTIEKL GAAVQKLMEV KIQRMQRLQD LATTMLELWN LMDTPIEEQQ EYQHITCNIA ASEHEITEAN SLSEDFIKYV
301: EAEVVRLDEV KASKMKELVL KKRSELEEIC RKTHLLPVSD SAIDQTIVAI ESGIVDATMV LEHLEQHISK IKEEALSRKE ILERVEKWLS ACDEESWLEE
401: YNRDDNRYNA GRGAHLTLKR AEKARNLVTK LPGMVEALAS KTIVWEQENG IEFLYDGIRL LSMLEEYNIL RQEREEEHRR QRDQKKLQGQ LIAEQEALYG
501: SKPSPSKPLG GKKAPRMSTG GASNRRLSLG AAMHQTPKPN KKADHRHNDG ALSNGRRGLD IAGLPSRKQS MNPSEMLQSP LVRKPFSPIS TTVVASKANI
601: ATTTTQQLPK NNAVNEISSF ATPIKNNNIL RNLEEEKMMT MMMQTPKNVA AMIPIPSTPA TVSVPMHTAP TPFTNNARLM SEKPEVVEYS FEERRLAFML
701: QSECRLV

Arabidopsis Description

MAP65-365-kDa microtubule-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.