CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0719000-01	Rice	cytosol, nucleus	62.4	83.69
TraesCS4A01G263800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.36	80.0
TraesCS4B01G051200.1	Wheat	nucleus	77.88	79.77
TraesCS4D01G051300.1	Wheat	cytosol	73.62	78.85
HORVU4Hr1G008440.3	Barley	nucleus	78.67	70.44
Zm00001d033794_P001	Maize	nucleus	90.52	56.73
KRH09582	Soybean	cytosol, mitochondrion, nucleus	12.95	54.3
GSMUA_Achr10P...	Banana	nucleus	50.71	53.15
KRH46955	Soybean	cytosol	23.22	51.94
KRH01846	Soybean	extracellular	27.33	50.0
VIT_01s0011g06330.t01	Wine grape	nucleus	46.92	49.58
EER92583	Sorghum	cytosol	47.71	49.43
GSMUA_Achr6P05980_001	Banana	cytosol	45.97	48.91
KRG89099	Soybean	cytosol	46.29	48.75
KRH40910	Soybean	cytosol, mitochondrion, nucleus	46.13	48.59
EER98994	Sorghum	nucleus	45.02	47.82
CDY17624	Canola	nucleus	45.81	47.7
Bra024843.1-P	Field mustard	nucleus	45.66	47.53
AT2G01910.1	Thale cress	nucleus	45.02	46.88
Solyc01g005080.2.1	Tomato	cytosol	41.39	46.87
PGSC0003DMT400075869	Potato	nucleus	44.08	46.58
Solyc04g008290.2.1	Tomato	nucleus	43.92	46.33
CDY03090	Canola	nucleus	45.34	46.22
AT1G14690.1	Thale cress	cytosol	43.76	45.94
PGSC0003DMT400058659	Potato	cytosol, plastid	43.6	45.92
CDX81663	Canola	cytosol	43.29	45.82
CDY33748	Canola	cytosol	43.13	45.73
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	42.97	45.71
CDY15798	Canola	endoplasmic reticulum, golgi	29.23	43.84
EER88641	Sorghum	cytosol	36.02	39.31
EER89674	Sorghum	cytosol	35.55	38.01
KXG21994	Sorghum	cytosol	33.18	36.71
EES15312	Sorghum	cytosol	32.07	34.35
GSMUA_Achr2P21660_001	Banana	endoplasmic reticulum, extracellular	46.6	31.12
OQU87349	Sorghum	golgi, vacuole	34.28	30.35
EES06214	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.96	30.26
Bra026625.1-P	Field mustard	mitochondrion	16.27	26.82
CDY09401	Canola	endoplasmic reticulum, golgi, plasma membrane	20.06	22.32
EES11428	Sorghum	nucleus	8.69	19.1
OQU77968	Sorghum	cytosol	9.95	17.17

Protein Annotations

Gene3D:1.20.58.1520	MapMan:35.1	EntrezGene:8059998	UniProt:C5WMZ4	ncoils:Coil	EnsemblPlants:EER90980
ProteinID:EER90980	ProteinID:EER90980.1	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF14	EnsemblPlantsGene:SORBI_3001G112100	unigene:Sbi.11080
UniParc:UPI0001A824EE	RefSeq:XP_002463982.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:8778792..8783607

Molecular Weight (calculated)

69825.6 Da

IEP (calculated)

8.279

GRAVY (calculated)

-0.419

Length

633 amino acids

Sequence
(BLAST)

001: MGEAVTAAEL LYGMPLIRSV SGDGGGGVEI GGCSALLVEL KQLWGEIGKS REERERMVRE LEAECMRVYR RKVDEATGER AMLHQSLAAG EAEIAALTAA
101: LGSDNSPQLK VNKWTMSLTE RVSSATTLLE ELRSVKAERS RQFADIRSEI EKITAEIAGR SYGGYEGSPR AGEVVEEHDL TIRRLNEYKA RLTSLQKEKS
201: DRLHRVLEHV TEVHSLCDVL GEDFIAIVNE VHPGLHLHET SDPGKPTSIS DSTLSSLAQV VAMLASEKAK RAAMLREAVV PLVELWELMD SSEEERRGFR
301: KVTAVLNPDK VDALSSGVLS VATIKKTEEE VERLTRLKAG RMKELVLKRR LELENICRSM HVEPDASTVP EKSIALIDSG LVNPSELMAS IDEQIAKARE
401: ELQSRREVME KINKWLLACE EEKWLEEYNM DENRFSTGRI ARLNLKRAEK ARLIITKIPA VVDNLIIRTL AWESERKKPF LYDGARLVAV LEEHKQARIR
501: QEEERRRLRE QKKLRTLLSE KEAMPHLKRP GSSFGRATEP CNVNRKRVDA AGRFASSAAP SVRSGASSSS SSSSGSGGGG ASATELIRPR SSAAGAGQCG
601: EFFKGARRLS APAPFNYVAV SKGGSMSSSL ALS

Best Arabidopsis Sequence Match ( AT2G01910.2 )
(BLAST)

001: MLMELERECL QIYQRKVDEA ANSKAKLHQS VASIEAEVAS LMAALGVLNI NSPIKLDKGS KSLKEKLAAV TPLVEELRIQ KEERMKQFSD IKAQIEKISG
101: EISGYSDHLN KAMNISLTLE EQDLTLRNLN EYQTHLRTLQ KEKSDRLNKV LGYVNEVHAL CGVLGVDFSQ TVSAVHPSLH RTDQEQSTNI SDSTLEGLEH
201: MIQKLKTERK SRFQKLKDVV ASLFELWNLM DTPQEDRTKF GKVTYVVRSS EANITEPGIL STETIEQVST EVDSLSKLKA SRMKELVMKR RSELEDLCRL
301: THIQPDTSTS AEKSTALIDS GLVDPSELLA NIEMQINKIK DEAQSRKDIM DRIDRWLSAC EEENWLEEYN LDENRYSAGR GGHVNLKRAE RARVTINKIP
401: GMVDTLIKKT LVWEEDMQKS FLYDGVRLVN ILEDYKLTRK QQEEEKKRYR DQKKRQDLLL TQRESIYGSK PSPRRSSSFR KPNGFNISNG NGSVPPTPRR
501: GSVGTTTPDV LLTPRSYSGH HRQNGYFKEV RRLSTTPLNY VAMQKEDTVS TTYTSIYSSE PDSPLQG

Arabidopsis Description

MAP65-665-kDa microtubule-associated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIS3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.