Factsheet for GSMUA_Achr2P21660_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	41.24	64.74
GSMUA_Achr6P05980_001	Banana	cytosol	38.61	61.51
VIT_01s0011g06330.t01	Wine grape	nucleus	38.61	61.1
GSMUA_Achr6P23030_001	Banana	cytosol	36.08	60.85
KRH40910	Soybean	cytosol, mitochondrion, nucleus	36.29	57.24
KRG89099	Soybean	cytosol	36.08	56.91
GSMUA_Achr6P04350_001	Banana	cytosol	37.76	56.83
TraesCS4A01G074200.2	Wheat	nucleus	36.29	56.3
KRH09582	Soybean	cytosol, mitochondrion, nucleus	8.97	56.29
EER92583	Sorghum	cytosol	36.18	56.14
TraesCS4D01G231800.3	Wheat	nucleus	36.08	55.97
Os03t0237600-04	Rice	nucleus	35.97	55.9
TraesCS4B01G230500.2	Wheat	nucleus	35.97	55.81
Zm00001d028363_P001	Maize	cytosol	35.87	55.65
Solyc01g005080.2.1	Tomato	cytosol	32.81	55.64
CDY17624	Canola	nucleus	35.65	55.59
KRH46955	Soybean	cytosol	16.56	55.48
AT2G01910.1	Thale cress	nucleus	35.55	55.43
Bra024843.1-P	Field mustard	nucleus	35.55	55.43
PGSC0003DMT400058659	Potato	cytosol, plastid	35.13	55.41
PGSC0003DMT400075869	Potato	nucleus	34.92	55.26
Solyc04g008290.2.1	Tomato	nucleus	34.7	54.83
CDX81663	Canola	cytosol	34.39	54.52
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	34.18	54.45
CDY33748	Canola	cytosol	34.07	54.1
AT1G14690.1	Thale cress	cytosol	34.39	54.06
KRH01846	Soybean	extracellular	19.62	53.76
CDY03090	Canola	nucleus	34.7	52.98
CDY15798	Canola	endoplasmic reticulum, golgi	23.0	51.66
HORVU4Hr1G064580.2	Barley	endoplasmic reticulum, nucleus, plastid	36.81	48.34
Os03t0719000-01	Rice	cytosol, nucleus	23.42	47.03
GSMUA_Achr7P06200_001	Banana	cytosol	29.11	46.94
TraesCS4A01G263800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.59	46.77
TraesCS4D01G051300.1	Wheat	cytosol	29.11	46.7
EER90980	Sorghum	cytosol	31.12	46.6
TraesCS4B01G051200.1	Wheat	nucleus	30.38	46.6
GSMUA_Achr4P19380_001	Banana	cytosol	28.8	46.59
GSMUA_Achr3P13450_001	Banana	cytosol	28.69	46.18
GSMUA_Achr4P03890_001	Banana	cytosol	28.48	46.08
GSMUA_Achr9P17360_001	Banana	cytosol	27.11	44.23
HORVU4Hr1G008440.3	Barley	nucleus	31.54	42.29
GSMUA_Achr11P...	Banana	nucleus	24.58	40.52
GSMUA_Achr5P10040_001	Banana	nucleus	26.79	40.06
GSMUA_Achr5P11340_001	Banana	cytosol	27.11	38.53
GSMUA_Achr1P02510_001	Banana	cytosol	26.37	37.04
Bra026625.1-P	Field mustard	mitochondrion	12.97	32.03
Zm00001d033794_P001	Maize	nucleus	30.91	29.01
CDY09401	Canola	endoplasmic reticulum, golgi, plasma membrane	15.72	26.19

Protein Annotations

Gene3D:1.20.58.1520	Gene3D:2.60.120.200	MapMan:50.2.4	ncoils:Coil	InterPro:ConA-like_dom_sf	InterPro:GH16
GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975
GO:GO:0006073	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0048046
EnsemblPlantsGene:GSMUA_Achr2G21660_001	EnsemblPlants:GSMUA_Achr2P21660_001	EnsemblPlants:GSMUA_Achr2T21660_001	InterPro:IPR000757	UniProt:M0SA07	InterPro:MAP65_Ase1_PRC1
PFAM:PF00722	PFAM:PF03999	PFAM:PF06955	PFscan:PS51762	PANTHER:PTHR19321	PANTHER:PTHR19321:SF5
SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI000295FBA1	InterPro:XET_C	SEG:seg	:

Description

65-kDa microtubule-associated protein 6 [Source:GMGC_GENE;Acc:GSMUA_Achr2G21660_001]

Coordinates

chr2:+:21045599..21058204

Molecular Weight (calculated)

108039.0 Da

IEP (calculated)

7.175

GRAVY (calculated)

-0.471

Length

948 amino acids

Sequence
(BLAST)

001: MVSSSSFFFL FLLCSVLFLS DEATSLPELP NLTTLSFEEG YTQLFGDSNL LLHRDGRAVH LALDQRTGAG FASQDLYLHG FFSASIKLPS DYAAGVVVAF
101: YMSNGDVFEK SHDELDFEFL GNIRGREWRV QTNVYGNGST AVGREERYQL WFDPTEDYHQ YSILWSHERI IFYIDNIPIR EVVRTQAMGG DFPSKPMSLY
201: ATIWDGSTWA TSGGRYKVNY KLAPYVADFA DLILHGCAVD PSDHKTACQR SDAVLYDAIT MSADQRTAMA KFRKKHMTYS YCHDRIRYPT PPPECMFVGP
301: ESQNFLASGD AKFNYRHRRG RRYGRSSVDA RTKGEMAVET GIRTGVCMGS KCGALLRELE KIWTEVGESK EDKDLMLVEL ERECIRVYRR KVEEAGSNRA
401: HLHRSLAEKE AEVTALMSAL GEQSLQLKTW ILILLHKHKL MEKRLPLKEQ LASVNPLLED LRKKKEERLK QFADIKSQIE KINVEILGSS HHDHSPANPV
501: KIEEDDLSIR KLTEYQSQLC ILQKEKSDRL QKVLESVNEM HSLCEHLEVD FRKTVETVHP SLHDTGGGHS PNISETALVG LSQAILKLKT EKKIRTQKLL
601: EAVESLLELW NLMDTPVEER KYFGRVTCIL GLPEHDIGCF GLLSLDTIKQ MEAEVERLTN LKARRMKELV LRKRMELEEI CRTAHIEPDM STASEKIGAL
701: IDSGIVDPSE LLTKIEMQIV KAREESMIRK EIMERVDKWL AACEEENWLE DYDQDENKYS AGRGAHLNLK RAEKARAIVT KIPDTVDKLM NKISVWEKER
801: NMPFLYDGVP LVSLLEEYKV IRLKKEELKR RYRDQKKLQN LLLTGKETVY GSKPSPKRSN NFNRKTNENG FMTPTPWRLS AGGATPDLLM QCSYSGHSNG
901: CFKEIRRLST TSLNLISISK DDRVSSLASV TSSEPGSPPL SQLSGLNR

Best Arabidopsis Sequence Match ( AT2G01910.1 )
(BLAST)

001: MLEIGSPNAL FFRTNTTCNN LLRELQKIWV EIGETETEKD RMLMELEREC LQIYQRKVDE AANSKAKLHQ SVASIEAEVA SLMAALGVLN INSPIKLDKG
101: SKSLKEKLAA VTPLVEELRI QKEERMKQFS DIKAQIEKIS GEISGYSDHL NKAMNISLTL EEQDLTLRNL NEYQTHLRTL QKEKSDRLNK VLGYVNEVHA
201: LCGVLGVDFS QTVSAVHPSL HRTDQEQSTN ISDSTLEGLE HMIQKLKTER KSRFQKLKDV VASLFELWNL MDTPQEDRTK FGKVTYVVRS SEANITEPGI
301: LSTETIEQVS TEVDSLSKLK ASRMKELVMK RRSELEDLCR LTHIQPDTST SAEKSTALID SGLVDPSELL ANIEMQINKI KDEAQSRKDI MDRIDRWLSA
401: CEEENWLEEY NLDENRYSAG RGGHVNLKRA ERARVTINKI PGMVDTLIKK TLVWEEDMQK SFLYDGVRLV NILEDYKLTR KQQEEEKKRY RDQKKRQDLL
501: LTQRESIYGS KPSPRRSSSF RKPNGFNISN GNGSVPPTPR RGSVGTTTPD VLLTPRSYSG HHRQNGYFKE VRRLSTTPLN YVAMQKEDTV STTYTSIYSS
601: EPDSPLQG

Arabidopsis Description

MAP65-665-kDa microtubule-associated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIS3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.