CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89099	Soybean	cytosol	96.84	96.84
KRH46955	Soybean	cytosol	41.93	89.05
KRH01846	Soybean	extracellular	50.42	87.57
KRH09582	Soybean	cytosol, mitochondrion, nucleus	20.8	82.78
KRH33387	Soybean	cytosol	14.81	77.39
VIT_01s0011g06330.t01	Wine grape	nucleus	75.21	75.46
CDY17624	Canola	nucleus	69.22	68.42
Bra024843.1-P	Field mustard	nucleus	69.05	68.26
AT2G01910.1	Thale cress	nucleus	68.89	68.09
CDY33748	Canola	cytosol	66.22	66.67
PGSC0003DMT400075869	Potato	nucleus	66.39	66.61
PGSC0003DMT400058659	Potato	cytosol, plastid	66.56	66.56
Solyc04g008290.2.1	Tomato	nucleus	66.39	66.5
CDX81663	Canola	cytosol	66.06	66.39
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	65.56	66.22
Solyc01g005080.2.1	Tomato	cytosol	61.56	66.19
AT1G14690.1	Thale cress	cytosol	66.39	66.17
CDY15798	Canola	endoplasmic reticulum, golgi	45.42	64.69
CDY03090	Canola	nucleus	66.39	64.25
GSMUA_Achr6P23030_001	Banana	cytosol	58.24	62.28
GSMUA_Achr10P...	Banana	nucleus	61.23	60.93
EER98994	Sorghum	nucleus	57.9	58.39
TraesCS5D01G240800.1	Wheat	nucleus	56.91	58.06
Os09t0450300-01	Rice	nucleus	56.74	57.31
GSMUA_Achr6P04350_001	Banana	cytosol	60.07	57.3
TraesCS5B01G232400.1	Wheat	nucleus	56.07	57.22
Os03t0237600-04	Rice	nucleus	58.07	57.21
TraesCS5A01G233900.1	Wheat	nucleus	55.74	57.17
TraesCS4A01G074200.2	Wheat	nucleus	57.9	56.96
EER92583	Sorghum	cytosol	57.9	56.96
Zm00001d028363_P001	Maize	cytosol	57.74	56.79
TraesCS4B01G230500.2	Wheat	nucleus	57.4	56.46
TraesCS4D01G231800.3	Wheat	nucleus	57.4	56.46
GSMUA_Achr6P05980_001	Banana	cytosol	55.41	55.97
Zm00001d020685_P002	Maize	cytosol	57.57	53.81
Os03t0719000-01	Rice	cytosol, nucleus	37.94	48.31
KRH73815	Soybean	cytosol	46.76	48.28
HORVU4Hr1G064580.2	Barley	endoplasmic reticulum, nucleus, plastid	57.74	48.06
KRH14311	Soybean	endoplasmic reticulum	46.26	47.12
EER90980	Sorghum	cytosol	48.59	46.13
TraesCS4D01G051300.1	Wheat	cytosol	44.59	45.35
TraesCS4A01G263800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.76	45.32
TraesCS4B01G051200.1	Wheat	nucleus	46.59	45.31
KRG98677	Soybean	cytosol	32.28	44.19
KRH14315	Soybean	cytosol, endoplasmic reticulum	43.59	43.96
KRH46253	Soybean	nucleus	22.63	43.17
KRG97427	Soybean	cytosol	37.77	41.2
KRH20613	Soybean	cytosol	38.44	40.74
Bra026625.1-P	Field mustard	mitochondrion	25.79	40.36
KRH38719	Soybean	cytosol	42.76	39.91
HORVU4Hr1G008440.3	Barley	nucleus	46.92	39.89
KRH31473	Soybean	cytosol	37.94	38.38
KRG92454	Soybean	nucleus	45.09	37.28
KRH34346	Soybean	cytosol	45.59	36.78
GSMUA_Achr2P21660_001	Banana	endoplasmic reticulum, extracellular	57.24	36.29
KRG99429	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	7.65	34.07
KRH09228	Soybean	cytosol	30.12	33.83
KRH40591	Soybean	nucleus	37.6	32.24
CDY09401	Canola	endoplasmic reticulum, golgi, plasma membrane	29.12	30.76
Zm00001d033794_P001	Maize	nucleus	47.59	28.32

Protein Annotations

Gene3D:1.20.58.1520	EntrezGene:100787868	MapMan:35.1	EMBL:ACUP02006069	ncoils:Coil	EnsemblPlantsGene:GLYMA_09G285100
GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	UniProt:I1L7A6	EnsemblPlants:KRH40910
ProteinID:KRH40910	ProteinID:KRH40910.1	InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF5
UniParc:UPI000233902F	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:50037391..50043933

Molecular Weight (calculated)

68242.3 Da

IEP (calculated)

7.823

GRAVY (calculated)

-0.664

Length

601 amino acids

Sequence
(BLAST)

001: MLAIGGHGTS IRTSSTCTAL LRELEQIWND IGETEVEKDR MLMELERECL EVYRRKVDEA VNTKARFHQT VAAKEAELAT LMAALGEHDI HSPIKTEKRS
101: VSLKQKLASI TPWVEELKKK KDERLKQFED VKAQIEKISG EIFGFHSVNN ALSSTTVEDD QDLSLRRLNE YQTHLRTLQK EKSDRLQKVL QCVNEVHSLC
201: SVLGLDFGQT VGDVHPSLHG TQVEQSTNIS NSTLEGLEQA ILKLKIERKT RIQKLKDVVA KLFELWNLMD SSKEERNCFM KITSIVGTSE SEITERGVLS
301: TEMIEKASAE VDRLAKLKAS RMKELVFKKR SELEEICRLT HIEPDTSTAA EKASALIDSG LVDPSELLAN IEEQIIKAKG EALSRKEVTD RIDKWFAACE
401: EENWLDKYNQ DDNRYSAGRG AHINLKRAEH ARITIGKIPA MVDNLINKTL AWEDEKKTHF LYDGVRLVSI LDDYKLARQQ KEEDKRRHRD LKKMQDLLLN
501: QKEAMYGSKP SPRKNNSFRK TNSYRANGNG SMPPTPRRNS LSGGTTSELL TPRSYSGRQN GYFKEMRRLS TAPLNFVAIS KEDTMSYASL CGSEPDSPPQ
601: V

Best Arabidopsis Sequence Match ( AT2G01910.1 )
(BLAST)

001: MLEIGSPNAL FFRTNTTCNN LLRELQKIWV EIGETETEKD RMLMELEREC LQIYQRKVDE AANSKAKLHQ SVASIEAEVA SLMAALGVLN INSPIKLDKG
101: SKSLKEKLAA VTPLVEELRI QKEERMKQFS DIKAQIEKIS GEISGYSDHL NKAMNISLTL EEQDLTLRNL NEYQTHLRTL QKEKSDRLNK VLGYVNEVHA
201: LCGVLGVDFS QTVSAVHPSL HRTDQEQSTN ISDSTLEGLE HMIQKLKTER KSRFQKLKDV VASLFELWNL MDTPQEDRTK FGKVTYVVRS SEANITEPGI
301: LSTETIEQVS TEVDSLSKLK ASRMKELVMK RRSELEDLCR LTHIQPDTST SAEKSTALID SGLVDPSELL ANIEMQINKI KDEAQSRKDI MDRIDRWLSA
401: CEEENWLEEY NLDENRYSAG RGGHVNLKRA ERARVTINKI PGMVDTLIKK TLVWEEDMQK SFLYDGVRLV NILEDYKLTR KQQEEEKKRY RDQKKRQDLL
501: LTQRESIYGS KPSPRRSSSF RKPNGFNISN GNGSVPPTPR RGSVGTTTPD VLLTPRSYSG HHRQNGYFKE VRRLSTTPLN YVAMQKEDTV STTYTSIYSS
601: EPDSPLQG

Arabidopsis Description

MAP65-665-kDa microtubule-associated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIS3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.