Factsheet for TraesCS5D01G240800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G232400.1	Wheat	nucleus	97.28	97.28
TraesCS5A01G233900.1	Wheat	nucleus	96.6	97.1
EER98994	Sorghum	nucleus	84.55	83.56
Os09t0450300-01	Rice	nucleus	83.36	82.52
Zm00001d020685_P002	Maize	cytosol	83.53	76.52
VIT_01s0011g06330.t01	Wine grape	nucleus	59.42	58.43
TraesCS4D01G231800.3	Wheat	nucleus	60.1	57.94
Solyc01g005080.2.1	Tomato	cytosol	54.84	57.78
KRH09582	Soybean	cytosol, mitochondrion, nucleus	14.6	56.95
KRG89099	Soybean	cytosol	58.06	56.91
KRH40910	Soybean	cytosol, mitochondrion, nucleus	58.06	56.91
PGSC0003DMT400075869	Potato	nucleus	57.39	56.43
Solyc04g008290.2.1	Tomato	nucleus	57.22	56.17
CDY17624	Canola	nucleus	57.89	56.09
Bra024843.1-P	Field mustard	nucleus	57.73	55.92
PGSC0003DMT400058659	Potato	cytosol, plastid	56.88	55.74
KRH46955	Soybean	cytosol	26.49	55.12
AT2G01910.1	Thale cress	nucleus	56.88	55.1
AT1G14690.1	Thale cress	cytosol	55.69	54.39
KRH01846	Soybean	extracellular	31.92	54.34
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	54.16	53.61
CDY33748	Canola	cytosol	53.82	53.1
CDX81663	Canola	cytosol	53.82	53.01
CDY03090	Canola	nucleus	55.86	52.98
CDY15798	Canola	endoplasmic reticulum, golgi	37.52	52.37
TraesCS7D01G399400.1	Wheat	cytosol	44.31	45.0
TraesCS4D01G051300.1	Wheat	cytosol	44.99	44.84
TraesCS7D01G224800.1	Wheat	cytosol	40.92	41.41
TraesCS6D01G263300.1	Wheat	cytosol	40.07	40.2
TraesCS1D01G256000.1	Wheat	cytosol	34.8	38.1
TraesCS7D01G261100.1	Wheat	nucleus	35.14	35.08
TraesCS3D01G264700.2	Wheat	cytosol	40.24	34.35
TraesCS1D01G386100.1	Wheat	cytosol	39.05	33.77
Bra026625.1-P	Field mustard	mitochondrion	21.22	32.55
CDY09401	Canola	endoplasmic reticulum, golgi, plasma membrane	26.15	27.07

Protein Annotations

EnsemblPlants:TraesCS5D01G240800.1	EnsemblPlantsGene:TraesCS5D01G240800	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1
ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF5	PFAM:PF03999	SEG:seg	MapMan:35.1

Description

No Description!

Coordinates

chr5D:-:349864767..349868631

Molecular Weight (calculated)

66718.2 Da

IEP (calculated)

8.425

GRAVY (calculated)

-0.730

Length

589 amino acids

Sequence
(BLAST)

001: MVGMEGTGCG ALLRELQQIW AEVGESEGEK SKVLSEIERE CLEVYRRKVD DANRTRVQLH QSVATKEAEV ALLMATLGEH KLYLKKDKGY VSLKEQLAAV
101: TPVLDDLKCK KEERIKQYYD IRSQIEKIRS ELSEHNDKGD HVNSPAADEH DLSTRKLNSY QAQLSTLQKD KSDRLHKVLK YVNEVHSLCG VLGIDFAKTV
201: NGIHPSLHQN GVEQSRNISN STLEGLASTI SNLKAERKSR IDKMRDTMES LCHLWKLMDS SEVEKRQFSK VISILISPEE GITSAGVLSQ ETIEKMEAEV
301: ERLTELKTKR LKEIVTKRRA ELEDICKNAH IEPDLSTAPE QTNALIDSGT IDPSELLANI ESQIVKAKEE SLSRKDIMDR INKWIAACDE EAWLEEYNQD
401: SKRYSSGRGA HVNLRRAEKA RILVTKIPAM MDNLINRTFA WENARNKPFL YDGGRLVSVL EEYRLNRKQK EEEKRRYRDQ KKLESILLAE KEAIFGSKPS
501: PKRASSLTRK TNGYRSNGSS NGLMTPTPRR SSLGSATPEL STPRSYTSRY NRYFGDSRRL SISQLNFGDD SLSTFTSISG SEPESPSMG

Best Arabidopsis Sequence Match ( AT2G01910.1 )
(BLAST)

001: MLEIGSPNAL FFRTNTTCNN LLRELQKIWV EIGETETEKD RMLMELEREC LQIYQRKVDE AANSKAKLHQ SVASIEAEVA SLMAALGVLN INSPIKLDKG
101: SKSLKEKLAA VTPLVEELRI QKEERMKQFS DIKAQIEKIS GEISGYSDHL NKAMNISLTL EEQDLTLRNL NEYQTHLRTL QKEKSDRLNK VLGYVNEVHA
201: LCGVLGVDFS QTVSAVHPSL HRTDQEQSTN ISDSTLEGLE HMIQKLKTER KSRFQKLKDV VASLFELWNL MDTPQEDRTK FGKVTYVVRS SEANITEPGI
301: LSTETIEQVS TEVDSLSKLK ASRMKELVMK RRSELEDLCR LTHIQPDTST SAEKSTALID SGLVDPSELL ANIEMQINKI KDEAQSRKDI MDRIDRWLSA
401: CEEENWLEEY NLDENRYSAG RGGHVNLKRA ERARVTINKI PGMVDTLIKK TLVWEEDMQK SFLYDGVRLV NILEDYKLTR KQQEEEKKRY RDQKKRQDLL
501: LTQRESIYGS KPSPRRSSSF RKPNGFNISN GNGSVPPTPR RGSVGTTTPD VLLTPRSYSG HHRQNGYFKE VRRLSTTPLN YVAMQKEDTV STTYTSIYSS
601: EPDSPLQG

Arabidopsis Description

MAP65-665-kDa microtubule-associated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIS3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.