Factsheet for PGSC0003DMT400075869

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g008290.2.1	Tomato	nucleus	98.66	98.5
PGSC0003DMT400058659	Potato	cytosol, plastid	78.3	78.04
VIT_01s0011g06330.t01	Wine grape	nucleus	70.45	70.45
KRG89099	Soybean	cytosol	67.61	67.39
CDY17624	Canola	nucleus	67.61	66.61
Bra024843.1-P	Field mustard	nucleus	67.45	66.45
KRH40910	Soybean	cytosol, mitochondrion, nucleus	66.61	66.39
AT2G01910.1	Thale cress	nucleus	67.11	66.12
AT1G14690.1	Thale cress	cytosol	64.11	63.68
CDX81663	Canola	cytosol	63.11	63.21
CDY33748	Canola	cytosol	62.77	62.98
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	62.44	62.86
CDY03090	Canola	nucleus	64.94	62.64
CDY15798	Canola	endoplasmic reticulum, golgi	43.91	62.32
KRH09582	Soybean	cytosol, mitochondrion, nucleus	15.53	61.59
KRH46955	Soybean	cytosol	28.71	60.78
GSMUA_Achr6P23030_001	Banana	cytosol	56.76	60.5
GSMUA_Achr10P...	Banana	nucleus	59.27	58.77
EER98994	Sorghum	nucleus	57.76	58.05
TraesCS5A01G233900.1	Wheat	nucleus	56.26	57.51
TraesCS5D01G240800.1	Wheat	nucleus	56.43	57.39
TraesCS5B01G232400.1	Wheat	nucleus	56.09	57.05
KRH01846	Soybean	extracellular	32.89	56.94
Os09t0450300-01	Rice	nucleus	55.93	56.3
TraesCS4A01G074200.2	Wheat	nucleus	57.43	56.3
TraesCS4D01G231800.3	Wheat	nucleus	57.43	56.3
TraesCS4B01G230500.2	Wheat	nucleus	57.26	56.14
Os03t0237600-04	Rice	nucleus	57.1	56.07
EER92583	Sorghum	cytosol	55.59	54.5
GSMUA_Achr6P04350_001	Banana	cytosol	57.26	54.44
Zm00001d028363_P001	Maize	cytosol	55.43	54.34
Zm00001d020685_P002	Maize	cytosol	58.26	54.28
GSMUA_Achr6P05980_001	Banana	cytosol	52.59	52.94
HORVU4Hr1G064580.2	Barley	endoplasmic reticulum, nucleus, plastid	57.26	47.51
Os03t0719000-01	Rice	cytosol, nucleus	35.73	45.34
PGSC0003DMT400057428	Potato	cytosol	43.57	44.92
PGSC0003DMT400033471	Potato	cytosol	42.57	44.43
EER90980	Sorghum	cytosol	46.58	44.08
TraesCS4A01G263800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.91	43.39
TraesCS4B01G051200.1	Wheat	nucleus	44.74	43.37
TraesCS4D01G051300.1	Wheat	cytosol	42.24	42.81
Bra026625.1-P	Field mustard	mitochondrion	26.21	40.89
PGSC0003DMT400008510	Potato	plastid	32.39	38.72
HORVU4Hr1G008440.3	Barley	nucleus	44.41	37.62
PGSC0003DMT400074853	Potato	cytosol	36.73	36.97
GSMUA_Achr2P21660_001	Banana	endoplasmic reticulum, extracellular	55.26	34.92
PGSC0003DMT400079660	Potato	cytosol	42.74	34.36
PGSC0003DMT400070431	Potato	nucleus	38.56	33.29
CDY09401	Canola	endoplasmic reticulum, golgi, plasma membrane	29.22	30.76
PGSC0003DMT400033224	Potato	nucleus	38.4	30.46
Zm00001d033794_P001	Maize	nucleus	46.24	27.43

Protein Annotations

EnsemblPlants:PGSC0003DMT400075869	EnsemblPlantsGene:PGSC0003DMG400029498	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF5	PFAM:PF03999
PGSC:PGSC0003DMG400029498	SEG:seg	UniParc:UPI0002965F5A	UniProt:M1CVU9	MapMan:35.1	:

Description

PLE [Source:PGSC_GENE;Acc:PGSC0003DMG400029498]

Coordinates

chr4:+:3124532..3131392

Molecular Weight (calculated)

67594.5 Da

IEP (calculated)

7.556

GRAVY (calculated)

-0.607

Length

599 amino acids

Sequence
(BLAST)

001: MAFGSPSSNA HSTNSTCHSL LRELQQIWTD IGESEVDKDR MLLELERECM EVYRRKVEEA ANAKSRLHQS VAAKEAELAT LMAALGEHNV NSPIQSEKMS
101: ASLKEQLGLI MPLVDDLKAK KDERVKQFAD IKTQIEKITS EISGSCNIVN SFSTLNLEEH DLSTRKLSEC QSHLRALQKE KSVRVQRVLD SVNEVHTLCG
201: VLGLDFGETV SNVHPSLHET SMGQYTNISD STLEGLDQAI LKLKTERKVR YQKLKDVAGS LFELWKLMDT TREERRKLSR IISFLDISES KVVEPGALTL
301: EVIQQVSAEV GRLTKLKASR MKELVMKRRA ELEDLCCKTH IQPDSSTAAD KSSAMIDSGL VDPCELLANI EAQINKVKDE ALSRKEIMDK IERWLSSCDE
401: ENWLEDYNLD HTRYSGGRGA HINLKRAERA RITVTKIPGM VDSLISRTLA WENENQKLFL YDGVRLVSIL EDYKVSRHQK EEDKKRARDQ KKLQDMLLAE
501: KESIYGSRPS PRRSNSFRKT NGFHTNGNGS VTPSPRRNSV GCATPELQTP RSYSGRQNTY FKEMRRLSTV PLNFVAMAKE DTMSFSSIGG SEPESPPQG

Best Arabidopsis Sequence Match ( AT2G01910.1 )
(BLAST)

001: MLEIGSPNAL FFRTNTTCNN LLRELQKIWV EIGETETEKD RMLMELEREC LQIYQRKVDE AANSKAKLHQ SVASIEAEVA SLMAALGVLN INSPIKLDKG
101: SKSLKEKLAA VTPLVEELRI QKEERMKQFS DIKAQIEKIS GEISGYSDHL NKAMNISLTL EEQDLTLRNL NEYQTHLRTL QKEKSDRLNK VLGYVNEVHA
201: LCGVLGVDFS QTVSAVHPSL HRTDQEQSTN ISDSTLEGLE HMIQKLKTER KSRFQKLKDV VASLFELWNL MDTPQEDRTK FGKVTYVVRS SEANITEPGI
301: LSTETIEQVS TEVDSLSKLK ASRMKELVMK RRSELEDLCR LTHIQPDTST SAEKSTALID SGLVDPSELL ANIEMQINKI KDEAQSRKDI MDRIDRWLSA
401: CEEENWLEEY NLDENRYSAG RGGHVNLKRA ERARVTINKI PGMVDTLIKK TLVWEEDMQK SFLYDGVRLV NILEDYKLTR KQQEEEKKRY RDQKKRQDLL
501: LTQRESIYGS KPSPRRSSSF RKPNGFNISN GNGSVPPTPR RGSVGTTTPD VLLTPRSYSG HHRQNGYFKE VRRLSTTPLN YVAMQKEDTV STTYTSIYSS
601: EPDSPLQG

Arabidopsis Description

MAP65-665-kDa microtubule-associated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIS3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.