Factsheet for PGSC0003DMT400057428

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g064970.2.1	Tomato	nucleus	99.14	99.14
PGSC0003DMT400033471	Potato	cytosol	82.62	83.62
KRH73815	Soybean	cytosol	77.8	77.66
VIT_19s0090g01230.t01	Wine grape	endoplasmic reticulum	74.7	77.5
KRH14311	Soybean	endoplasmic reticulum	77.11	75.93
GSMUA_Achr4P19380_001	Banana	cytosol	74.87	74.23
GSMUA_Achr7P06200_001	Banana	cytosol	74.35	73.47
GSMUA_Achr3P13450_001	Banana	cytosol	74.01	73.01
GSMUA_Achr4P03890_001	Banana	cytosol	72.63	72.01
KRG98677	Soybean	cytosol	53.87	71.3
KRH14315	Soybean	cytosol, endoplasmic reticulum	72.98	71.14
CDY17313	Canola	cytosol	70.91	70.43
CDY19902	Canola	cytosol	70.91	70.43
Bra002922.1-P	Field mustard	cytosol	70.74	70.26
Bra028986.1-P	Field mustard	cytosol	70.91	70.07
Os06t0308300-01	Rice	golgi	68.85	69.44
AT4G26760.1	Thale cress	cytosol	69.02	69.38
KRH46253	Soybean	nucleus	37.35	68.89
Bra035564.1-P	Field mustard	cytosol	69.54	68.82
AT5G55230.2	Thale cress	cytosol	72.81	68.67
CDY20777	Canola	cytosol	69.54	68.59
CDY14300	Canola	nucleus	68.67	68.56
Bra026405.1-P	Field mustard	cytosol	67.13	68.54
CDX89305	Canola	cytosol	67.13	68.54
CDY06596	Canola	cytosol	69.36	68.42
Bra010428.1-P	Field mustard	cytosol	68.5	68.38
EER89674	Sorghum	cytosol	67.64	66.39
TraesCS7D01G224800.1	Wheat	cytosol	66.44	66.32
TraesCS7D01G399400.1	Wheat	cytosol	65.92	66.03
CDY36737	Canola	nucleus	71.43	65.87
TraesCS7B01G304900.2	Wheat	cytosol	65.58	65.69
TraesCS7A01G405500.1	Wheat	cytosol	65.4	65.52
HORVU7Hr1G094860.1	Barley	cytosol	65.23	65.34
TraesCS7A01G223100.1	Wheat	cytosol, nucleus, plastid	66.44	65.09
Os06t0611000-01	Rice	nucleus	65.06	65.06
CDY12006	Canola	cytosol	71.08	64.13
EER88641	Sorghum	cytosol	63.51	63.62
TraesCS7B01G190000.1	Wheat	endoplasmic reticulum, golgi	66.95	63.25
HORVU7Hr1G045770.7	Barley	endoplasmic reticulum	66.61	63.24
HORVU6Hr1G070900.6	Barley	cytosol	62.48	61.53
TraesCS6D01G263300.1	Wheat	cytosol	61.96	61.33
Zm00001d037413_P002	Maize	cytosol	66.44	61.17
TraesCS6A01G282800.1	Wheat	cytosol	61.62	60.99
TraesCS6B01G311200.1	Wheat	cytosol	61.79	60.74
Os02t0720200-01	Rice	cytosol	61.27	60.44
CDX94287	Canola	nucleus	66.44	58.31
Zm00001d045864_P004	Maize	mitochondrion	65.58	56.28
CDX97365	Canola	nucleus	68.33	49.01
PGSC0003DMT400074853	Potato	cytosol	49.05	47.9
PGSC0003DMT400008510	Potato	plastid	40.79	47.31
PGSC0003DMT400058659	Potato	cytosol, plastid	45.78	44.26
PGSC0003DMT400075869	Potato	nucleus	44.92	43.57
PGSC0003DMT400079660	Potato	cytosol	49.57	38.66
PGSC0003DMT400070431	Potato	nucleus	43.89	36.74
PGSC0003DMT400033224	Potato	nucleus	42.86	32.98

Protein Annotations

Gene3D:1.20.58.1520	EntrezGene:102599360	MapMan:13.4.3.6	ncoils:Coil	GO:GO:0000226	GO:GO:0000910
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	UniProt:M1C112	InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	EnsemblPlantsGene:PGSC0003DMG400022299
PGSC:PGSC0003DMG400022299	EnsemblPlants:PGSC0003DMT400057428	PANTHER:PTHR19321	PANTHER:PTHR19321:SF15	UniParc:UPI000295FB1F	RefSeq:XP_006346185.1

Description

Microtubule-associated protein MAP65-1a [Source:PGSC_GENE;Acc:PGSC0003DMG400022299]

Coordinates

chr7:+:55128018..55133060

Molecular Weight (calculated)

65328.2 Da

IEP (calculated)

4.790

GRAVY (calculated)

-0.583

Length

581 amino acids

Sequence
(BLAST)

001: MAAVDDQTPP VLDETTCGTL LQKLQQIWDE VGETDDERDK MLLQIDQECL DVYKRKVDHA VKSRAHLLQA LADAKVELSR LLSALGEKTY VGIPEKTSGT
101: IKEQLAAIAP TLEKLWKQKD DRIKDFFDVQ SQIQKISSEI AGDSEQVESL TVDESDLSVK KLDEFHVQLQ ELQKEKSDRL HKVLDLVSTV HDLCAVLGMD
201: FFSTVTEVHP SLDDSTGVQS KSISNDTLSN LANTVLVLKE DKKQRLLKLQ ELATQLIDLW NLMDTPEEER SLFDHVTCNI SASVDEVAIP GALALDLIEQ
301: AEVEVERLDQ LKASKMKEIS FKRQAELEDI YARAHVEIDT EAAREKIMGL IDSGNVDPAE LLADMDNQIV NAKEEAHSRK EILEKVEKWM AACEEESWLE
401: DYNRDDNRYN ASRGAHLNLK RAEKARILVN KIPALVDSLV AKTRAWEQER DTTFTYDGVP LLAMLDEYMM LRHDREEEKR RLRDQKKFHE QMSKDPEVFG
501: STPSPVRPLG PKKVTGPRAN GSANGPASRR LSLNSHQNGS RSTSKDGKRD ARLSAPVNYV AMTKDDAASH ISGTEPIPST P

Best Arabidopsis Sequence Match ( AT5G55230.1 )
(BLAST)

001: MAVTDTESPH LGEITCGTLL EKLQEIWDEV GESDDERDKL LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TMSLGDKSLV GIPDKSSGTI
101: KEQLAAIAPA LEQLWQQKEE RVREFSDVQS QIQKICGDIA GGLSNEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLRK VLEFVSTVHD LCAVLGLDFL
201: STVTEVHPSL DEDTSVQSKS ISNETLSRLA KTVLTLKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISS SVDEVTVPGA LARDLIEQAE
301: VEVDRLDQLK ASRMKEIAFK KQSELEEIYA RAHVEVNPES ARERIMSLID SGNVEPTELL ADMDSQISKA KEEAFSRKDI LDRVEKWMSA CEEESWLEDY
401: NRDQNRYSAS RGAHLNLKRA EKARILVSKI PAMVDTLVAK TRAWEEEHSM SFAYDGVPLL AMLDEYGMLR QEREEEKRRL REQKKVQEQP HVEQESAFST
501: RPSPARPVSA KKTVGPRANN GGANGTHNRR LSLNANQNGS RSTAKEAGRR ETLNRPAAPT NYVAISKEEA ASSPVSGAAD HQVPASP

Arabidopsis Description

ATMAP65-1Microtubule-associated proteins 65-1 [Source:UniProtKB/TrEMBL;Acc:F4K3E4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.