CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0308300-01	Rice	golgi	89.02	91.49
Zm00001d037413_P002	Maize	cytosol	95.1	89.22
TraesCS7D01G224800.1	Wheat	cytosol	87.5	89.0
TraesCS7A01G223100.1	Wheat	cytosol, nucleus, plastid	88.01	87.86
TraesCS7B01G190000.1	Wheat	endoplasmic reticulum, golgi	88.01	84.72
HORVU7Hr1G045770.7	Barley	endoplasmic reticulum	87.33	84.48
Zm00001d045864_P004	Maize	mitochondrion	95.27	83.31
KRH73815	Soybean	cytosol	68.75	69.93
KRH14311	Soybean	endoplasmic reticulum	67.91	68.14
Solyc07g064970.2.1	Tomato	nucleus	66.72	67.99
PGSC0003DMT400057428	Potato	cytosol	66.39	67.64
PGSC0003DMT400033471	Potato	cytosol	63.85	65.85
AT4G26760.1	Thale cress	cytosol	63.18	64.71
CDY14300	Canola	nucleus	63.51	64.6
KRH14315	Soybean	cytosol, endoplasmic reticulum	65.03	64.6
Solyc12g014490.1.1	Tomato	cytosol	61.82	64.55
VIT_19s0090g01230.t01	Wine grape	endoplasmic reticulum	60.98	64.46
Bra026405.1-P	Field mustard	cytosol	61.49	63.97
CDX89305	Canola	cytosol	61.49	63.97
Bra028986.1-P	Field mustard	cytosol	63.51	63.95
Bra010428.1-P	Field mustard	cytosol	62.84	63.92
KRG98677	Soybean	cytosol	47.3	63.78
CDY19902	Canola	cytosol	63.01	63.76
CDY17313	Canola	cytosol	62.84	63.59
Bra002922.1-P	Field mustard	cytosol	62.84	63.59
Bra035564.1-P	Field mustard	cytosol	62.33	62.86
CDY20777	Canola	cytosol	62.5	62.82
KRH46253	Soybean	nucleus	33.28	62.54
AT5G55230.2	Thale cress	cytosol	64.53	62.01
CDY06596	Canola	cytosol	61.66	61.97
EER88641	Sorghum	cytosol	59.29	60.52
CDY36737	Canola	nucleus	64.02	60.16
CDY12006	Canola	cytosol	63.34	58.23
CDX94287	Canola	nucleus	60.3	53.93
CDX97365	Canola	nucleus	62.33	45.56
KXG21994	Sorghum	cytosol	42.57	44.06
EER98994	Sorghum	nucleus	43.07	42.79
EER92583	Sorghum	cytosol	42.4	41.08
EES15312	Sorghum	cytosol	40.54	40.61
OQU87349	Sorghum	golgi, vacuole	46.45	38.46
EER90980	Sorghum	cytosol	38.01	35.55
EES06214	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.29	34.7
EES11428	Sorghum	nucleus	11.82	24.31
OQU77968	Sorghum	cytosol	13.51	21.8

Protein Annotations

Gene3D:1.20.58.1520	MapMan:13.4.3.6	EntrezGene:8078236	UniProt:C5Z1K8	ncoils:Coil	EnsemblPlants:EER89674
ProteinID:EER89674	ProteinID:EER89674.1	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF9	EnsemblPlantsGene:SORBI_3010G129700	unigene:Sbi.281
UniParc:UPI0001A89B2F	RefSeq:XP_002438307.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:17533143..17538034

Molecular Weight (calculated)

65951.9 Da

IEP (calculated)

4.753

GRAVY (calculated)

-0.592

Length

592 amino acids

Sequence
(BLAST)

001: MAGDITCGSL LQKLQFIWDE VGESEEDRDK VLYQLDQECL DVYKRKVDQA TNSRDLLIQA LDDSKIELAR LLSALGEKAI ARTPEKTTGT IKQQLAAIAP
101: TLEQLTKQKN ERKREFVNVQ SQIDQICGEI AGTIEVGEQV TTPQVNEDDL TLERLEDFRS QLQELEKEKS NRLEKVLEYV SMVHDLCTVL GMDFLSTVTE
201: VHPSLDDSVG DNCKSISNDT LSNLDKTVAT LNEDKKLRLS KLQELAGQLY DLWDLMDAPK EERRMFDHVT CNRSASVDEV TAPGSLALDL IEQAEVEVQR
301: LDQLKYSKMK EIAFKKQTEL EDIYAGAHIV IDTAAAHEKI LALIEAGNIE PSELIADMDA QIAKAKEEAL SRKDILDKVE RWMSACEEES WLEDYNRDDN
401: RYNSSRGAHL NLKRAEKARI LVNKIPALVE TLVAKTRAWE ENRGLSFMYD GVPLLAMLDE YVMLRQEREE EKKRMREQKR YIEQQLNTDH EGPFGSRVSP
501: NRPASSKKAI GPKLNGSVSN GTPPNRRLSI SGQQNGGGHG VRSGGKDSKK DTVKTASPGN NAAAAAPVGV AATAKEDAAS QISVSDPVPS TP

Best Arabidopsis Sequence Match ( AT5G55230.1 )
(BLAST)

001: MAVTDTESPH LGEITCGTLL EKLQEIWDEV GESDDERDKL LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TMSLGDKSLV GIPDKSSGTI
101: KEQLAAIAPA LEQLWQQKEE RVREFSDVQS QIQKICGDIA GGLSNEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLRK VLEFVSTVHD LCAVLGLDFL
201: STVTEVHPSL DEDTSVQSKS ISNETLSRLA KTVLTLKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISS SVDEVTVPGA LARDLIEQAE
301: VEVDRLDQLK ASRMKEIAFK KQSELEEIYA RAHVEVNPES ARERIMSLID SGNVEPTELL ADMDSQISKA KEEAFSRKDI LDRVEKWMSA CEEESWLEDY
401: NRDQNRYSAS RGAHLNLKRA EKARILVSKI PAMVDTLVAK TRAWEEEHSM SFAYDGVPLL AMLDEYGMLR QEREEEKRRL REQKKVQEQP HVEQESAFST
501: RPSPARPVSA KKTVGPRANN GGANGTHNRR LSLNANQNGS RSTAKEAGRR ETLNRPAAPT NYVAISKEEA ASSPVSGAAD HQVPASP

Arabidopsis Description

ATMAP65-1Microtubule-associated proteins 65-1 [Source:UniProtKB/TrEMBL;Acc:F4K3E4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.