CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031619_P001	Maize	nucleus	93.57	93.57
Os08t0531100-01	Rice	cytosol	68.02	82.38
Zm00001d049816_P001	Maize	nucleus	36.89	79.85
TraesCS7D01G261100.1	Wheat	nucleus	78.51	78.64
TraesCS7B01G158100.1	Wheat	cytosol, mitochondrion, nucleus	78.51	78.64
TraesCS7A01G260100.2	Wheat	nucleus	78.51	78.64
HORVU7Hr1G054130.4	Barley	mitochondrion	78.0	69.32
GSMUA_Achr11P...	Banana	nucleus	59.39	61.04
VIT_01s0010g03540.t01	Wine grape	cytosol	54.48	56.79
KRG97427	Soybean	cytosol	50.93	54.63
KRH31473	Soybean	cytosol	53.3	53.03
Solyc05g015320.2.1	Tomato	extracellular	53.3	52.94
PGSC0003DMT400074853	Potato	cytosol	52.45	52.1
AT1G27920.1	Thale cress	nucleus	48.22	50.71
CDX84899	Canola	extracellular, nucleus, plastid	47.38	48.78
CDY27637	Canola	cytosol	46.87	48.6
Bra032853.1-P	Field mustard	cytosol	46.53	45.53
EER89674	Sorghum	cytosol	40.61	40.54
EER88641	Sorghum	cytosol	39.59	40.34
KXG21994	Sorghum	cytosol	35.53	36.71
EER92583	Sorghum	cytosol	37.73	36.5
EER98994	Sorghum	nucleus	35.53	35.23
EER90980	Sorghum	cytosol	34.35	32.07
OQU87349	Sorghum	golgi, vacuole	38.41	31.75
EES06214	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.8	31.11
EES11428	Sorghum	nucleus	9.64	19.79
OQU77968	Sorghum	cytosol	10.49	16.89

Protein Annotations

Gene3D:1.20.58.1520	MapMan:35.1	EntrezGene:8060953	UniProt:C5YHT3	ncoils:Coil	EnsemblPlants:EES15312
ProteinID:EES15312	ProteinID:EES15312.1	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005819
GO:GO:0005856	GO:GO:0005874	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009524
GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF3
EnsemblPlantsGene:SORBI_3007G194000	unigene:Sbi.16326	UniParc:UPI0001A8783D	RefSeq:XP_002445817.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:62659345..62664573

Molecular Weight (calculated)

68491.5 Da

IEP (calculated)

8.323

GRAVY (calculated)

-0.761

Length

591 amino acids

Sequence
(BLAST)

001: MGSLKMTEKA PGAALPESSC AYLLQELKMI WDEVGQNQNE RERILEELEQ ECQEVYRRKV NSANMSRIQL HQALAESEAE FTNLLLSLGE RSFPGRPEKM
101: AGTLKEQLNS ITPALQEMQM RKEARVKQFM EVQTEIHRIA SEIAGRLGNE AVTVNEEDLS LKKLEEFQSE LQRLKREKSD RLCKVEEYKV LIHNFAKVMG
201: MDPLKILANV HPRLLDGPNE QQTKNISDDI LNKLNMTVQQ LKEEKSNRRE KLQNLVKALT SLWNTLDTTM EERQPYGQIK VLAMTSVNGM LGPGSLTLET
301: IQQVESEVQR LNQLKASKMK ELFLKKRAEV DEICKKSHMD MPYQTEMDKI MNLIMSGDVV HDDLLKTMDE YIYKAKEEAT SRKDIMDKVE KWMASCDEER
401: WLEEYSRDER RYSISRGAHK HLKRAERARI IVNKIPGLVE QLMAKTQFWE QERNKIFYYD ELPLLAMLKD YMFTLKEKEE EKYRQRENKK IQTLLVKRPE
501: NSIMLRPNTS FSRPSSRGFN TSPGSTSIWT SQVSAKVQLP DSENSPAEKD MRAKRIRNRS MQGVLGNNRS CSTSHEDKAE VSTVKQGLSP I

Best Arabidopsis Sequence Match ( AT1G27920.1 )
(BLAST)

001: MGSLQTPIEM RSSSLLDTSC GYLLRELQMI WDEVGEDKFE REKVLLDIEQ ECVEAYRRKV DHANVSRSRL HQELAESEAE LTHFLLCLGE RSVPGRPEKK
101: GGTLREQLDS IAPALREMRL RKDERVKQFR SVKGEIQKIS AEIAGRSTYE DSTRKITIDD NDLSNKKLEE YQNELHRLHD EKNERLQKVD IYICAIRDLS
201: ATLGTEASMI ITKIHPSLND LYGISKNISD DILKKLNGTV VSLEEEKHKR LEKLHHLGRA LSNLWNLMDA SYEDRQKFFH VIDLLSSAPS DVCAPGSITL
301: DIIQQAEAEV KRLDQLKASR IKELFIKKQK ELEDTCNMSH METPSTEMGN ITNLVDSGEV DHVDLLAAMD EKIARAKEEA ASRKGIIEKV DRWMLASDEE
401: RWLEEYDQDE NRYSVSRNAH RNLRRAERAR ITVSKISGLV ESILVKAKSW EVERQKVFLY NEVPLVAMLQ EYNKLRQEKE MEKQRLREMK KMSIPQPVAE
501: GDNFYMARPA SSNRRISNRS MNGGFGSGSP INRKYSGGFN NTNNNYTALG TSIRRESRKS EA

Arabidopsis Description

MAP65-865-kDa microtubule-associated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7G0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.