Factsheet for TraesCS7A01G260100.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G261100.1	Wheat	nucleus	98.81	98.81
TraesCS7B01G158100.1	Wheat	cytosol, mitochondrion, nucleus	98.14	98.14
HORVU7Hr1G054130.4	Barley	mitochondrion	97.63	86.62
Os08t0531100-01	Rice	cytosol	65.93	79.71
EES15312	Sorghum	cytosol	78.64	78.51
Zm00001d031619_P001	Maize	nucleus	76.78	76.65
Zm00001d049816_P001	Maize	nucleus	31.02	67.03
GSMUA_Achr11P...	Banana	nucleus	58.98	60.52
VIT_01s0010g03540.t01	Wine grape	cytosol	53.9	56.08
KRG97427	Soybean	cytosol	50.34	53.9
KRH31473	Soybean	cytosol	52.2	51.85
Solyc05g015320.2.1	Tomato	extracellular	51.86	51.43
PGSC0003DMT400074853	Potato	cytosol	51.69	51.26
AT1G27920.1	Thale cress	nucleus	47.29	49.64
CDX84899	Canola	extracellular, nucleus, plastid	45.93	47.21
CDY27637	Canola	cytosol	45.59	47.19
Bra032853.1-P	Field mustard	cytosol	45.08	44.04
TraesCS7A01G405500.1	Wheat	cytosol	38.81	39.48
TraesCS7A01G223100.1	Wheat	cytosol, nucleus, plastid	38.14	37.94
TraesCS6A01G282800.1	Wheat	cytosol	37.29	37.48
TraesCS5A01G233900.1	Wheat	nucleus	34.92	35.15
TraesCS4A01G074200.2	Wheat	nucleus	35.25	34.04
TraesCS1A01G256800.1	Wheat	nucleus	33.05	33.85
TraesCS4A01G263800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.56	31.94
TraesCS3A01G264600.1	Wheat	cytosol	34.92	29.9
TraesCS1A01G378900.1	Wheat	cytosol	33.22	28.95
TraesCS6A01G089500.2	Wheat	nucleus	26.44	28.47

Protein Annotations

Gene3D:1.20.58.1520	MapMan:35.1	ncoils:Coil	GO:GO:0000226	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005819
GO:GO:0005856	GO:GO:0005874	GO:GO:0008017	GO:GO:0008150	GO:GO:0009524	GO:GO:0009987
GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF3	EnsemblPlantsGene:TraesCS7A01G260100
EnsemblPlants:TraesCS7A01G260100.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:252175765..252180518

Molecular Weight (calculated)

68281.7 Da

IEP (calculated)

7.183

GRAVY (calculated)

-0.789

Length

590 amino acids

Sequence
(BLAST)

001: MGSLRTAGTA RCLALPESSS TYLLQELKMI WDEVGQEENE RERILEELEQ ECQEVYRRKV NSANMLRIQL HQALAESEAE FTNLLLSLGE RSFPGRPEKM
101: NGTLKEQLNS ITPALQEMQM KKEARLKQFT EVQTEVQRIA SEIAGRSENE VVTVNEDDLS LKKLEEHQSE LQRLKREKGD RLCKVEEYKV LICNFAKIMG
201: MDPSNVLASV HPSLLIGANE QQKKNISDDI LNKLNTMVQQ LKEEKNHRLE KLHSLGKALA NLWNILDTAM EERQPYGQIN IFSLTSANGM LGPGSLRLEK
301: IQQIESEVQR LDQLKASKMK ELFIKKKAEI EEICKISHMD VPYQTEMDNI MELIMSGDVD HDNLLKTMDG YIYKTKEEAT SRKEIMDKVE KWITSCDEER
401: WLEEYSRDER RYSVSRGAHR HLKRAERARI IANKIPGLVE LLIEKTEIWE HGRKKIFYYD ELPLLEMLKQ YMLTLKEKEE ERCRQRENKK VQTQLVKRNE
501: NSFISRPNTG CSRPSSRGFN TSHRSTSFSS HRVSSVDQQP ISDNSAEKDM HIRKVRDRSM QSKAGNNRSC TVHDEDKTSG VSTKQGLSSI

Best Arabidopsis Sequence Match ( AT1G27920.1 )
(BLAST)

001: MGSLQTPIEM RSSSLLDTSC GYLLRELQMI WDEVGEDKFE REKVLLDIEQ ECVEAYRRKV DHANVSRSRL HQELAESEAE LTHFLLCLGE RSVPGRPEKK
101: GGTLREQLDS IAPALREMRL RKDERVKQFR SVKGEIQKIS AEIAGRSTYE DSTRKITIDD NDLSNKKLEE YQNELHRLHD EKNERLQKVD IYICAIRDLS
201: ATLGTEASMI ITKIHPSLND LYGISKNISD DILKKLNGTV VSLEEEKHKR LEKLHHLGRA LSNLWNLMDA SYEDRQKFFH VIDLLSSAPS DVCAPGSITL
301: DIIQQAEAEV KRLDQLKASR IKELFIKKQK ELEDTCNMSH METPSTEMGN ITNLVDSGEV DHVDLLAAMD EKIARAKEEA ASRKGIIEKV DRWMLASDEE
401: RWLEEYDQDE NRYSVSRNAH RNLRRAERAR ITVSKISGLV ESILVKAKSW EVERQKVFLY NEVPLVAMLQ EYNKLRQEKE MEKQRLREMK KMSIPQPVAE
501: GDNFYMARPA SSNRRISNRS MNGGFGSGSP INRKYSGGFN NTNNNYTALG TSIRRESRKS EA

Arabidopsis Description

MAP65-865-kDa microtubule-associated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7G0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.