Factsheet for TraesCS5A01G233900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G240800.1	Wheat	nucleus	97.1	96.6
TraesCS5B01G232400.1	Wheat	nucleus	96.42	95.93
EER98994	Sorghum	nucleus	84.13	82.72
Os09t0450300-01	Rice	nucleus	83.62	82.35
Zm00001d020685_P002	Maize	cytosol	83.62	76.21
VIT_01s0011g06330.t01	Wine grape	nucleus	58.7	57.43
Solyc01g005080.2.1	Tomato	cytosol	54.78	57.42
TraesCS4A01G074200.2	Wheat	nucleus	59.22	56.79
KRH09582	Soybean	cytosol, mitochondrion, nucleus	14.51	56.29
PGSC0003DMT400075869	Potato	nucleus	57.51	56.26
Solyc04g008290.2.1	Tomato	nucleus	57.34	56.0
KRG89099	Soybean	cytosol	57.34	55.91
KRH40910	Soybean	cytosol, mitochondrion, nucleus	57.17	55.74
CDY17624	Canola	nucleus	57.51	55.43
PGSC0003DMT400058659	Potato	cytosol, plastid	56.83	55.41
Bra024843.1-P	Field mustard	nucleus	57.34	55.26
KRH46955	Soybean	cytosol	26.28	54.42
AT2G01910.1	Thale cress	nucleus	56.31	54.28
AT1G14690.1	Thale cress	cytosol	55.29	53.73
KRH01846	Soybean	extracellular	31.57	53.47
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	53.92	53.11
CDY33748	Canola	cytosol	53.58	52.6
CDX81663	Canola	cytosol	53.58	52.51
CDY03090	Canola	nucleus	55.46	52.33
CDY15798	Canola	endoplasmic reticulum, golgi	37.2	51.66
TraesCS7A01G405500.1	Wheat	cytosol	45.05	45.52
TraesCS4A01G263800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.27	44.68
TraesCS7A01G223100.1	Wheat	cytosol, nucleus, plastid	41.13	40.64
TraesCS6A01G282800.1	Wheat	cytosol	40.27	40.2
TraesCS1A01G256800.1	Wheat	nucleus	35.67	36.28
TraesCS7A01G260100.2	Wheat	nucleus	35.15	34.92
TraesCS3A01G264600.1	Wheat	cytosol	40.1	34.11
TraesCS1A01G378900.1	Wheat	cytosol	39.08	33.83
Bra026625.1-P	Field mustard	mitochondrion	21.16	32.29
TraesCS6A01G089500.2	Wheat	nucleus	29.52	31.57
CDY09401	Canola	endoplasmic reticulum, golgi, plasma membrane	26.11	26.89

Protein Annotations

EnsemblPlants:TraesCS5A01G233900.1	EnsemblPlantsGene:TraesCS5A01G233900	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1
ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF5	PFAM:PF03999	SEG:seg	MapMan:35.1

Description

No Description!

Coordinates

chr5A:-:450164412..450168231

Molecular Weight (calculated)

66487.7 Da

IEP (calculated)

8.056

GRAVY (calculated)

-0.755

Length

586 amino acids

Sequence
(BLAST)

001: MEGTGCGALL RELQQIWAEV GESEGEKSKV LSEIERECLE VYRRKVDDAN RTRVQLHQSV ATKEAEVALL MATLGEHKLY LKKDKGYLSL KEQLATVVPV
101: LDDLKCKKEE RIKQYYDIRS QIEKIRSELS ERSDKGDHVN SPADDEHDLS TRKLNSYQAQ LSALQKDKSD RLHKVLKYVN EVHSLCGVLG IDFAKTVNGI
201: HPNLHQNGVE QSRNISNGTL EGLASTISNL KAERKSRIDK MRETMESLCH LWKLMDSSEE EKRQFSKVIS ILISPEEGIT SAGVLSQETI EKMEAEVERL
301: TELKTNRLKE IVTKRRAELE DICKNAHIQP DLSTAPEQTN ALIDSGTIDP SELLANIESQ ILKAKEESLS RKDIMDRINK WIAACDEEAW LEEYNQDSKR
401: YSSGRGAHVN LRRAEKARIL VTKIPAMMDN LINRTFAWEN ARNKPFLYDG GRLVSVLEEY RLNRKEKEEE KRRYRDQKKL ESILLAEKEA IFGSKPSPKR
501: ASSLTRKTNG YRSNGSSNGL MTPTPRRSSL GSATPELSTP RSYTSRYNRY FGDSRRLSVS QLNFGDDSLS TFTSISGSEP ESPSIG

Best Arabidopsis Sequence Match ( AT1G14690.1 )
(BLAST)

001: MLEIESPTSL CFRTNTTCNA LLRELQKIWV DIGESDAEKD RMLMELEKEC LEIYRRKVDE AANSKAQLHQ SLVSIEAEIA SLLAALGVFN SHSPMKAKEG
101: SKSLKEKLAA VRPMLEDLRL QKDERMKQFV DIKAQIEKMS GEISGYSDQL NKTMVGSLAL DEQDLTLRKL NEYQTHLRSL QKEKSDRLNK VLDYVNEVHT
201: LCGVLGVDFG QTVSEVHPSL HRTDHEQSTN ISDDTLDGLH HMIHKLKTER SVRFQKLKDV AGSLFELWNL MDTSQEERTK FASVSYVVRS SESDITEPNI
301: LSSETIEQVS AEVDCFNKLK ASRMKELVMK RRTELENLCR LAHIEADTST SLEKSTALID SGLVDPSELL TNIELHINKI KEEAHSRKEI IDRIDRWLSA
401: CEEENWLEEY NQDETRYSAG RGGHVNLKHA ERARITVNKI PSMVDNLIKK TLLWEDETRK SFLYDGVRLV SILEDYKLTR KQQEEEKRRY RDQKKMQDLL
501: IKRRESIYGS KPSPRRSNSV RKTNGYNGDA SVPPTPRRNS AGATNNDIMT TPRSYSSHRQ NGYFKEVRRL STAPLNFVAI PKEDSVSTYT SVCGSEPDSP
601: LYN

Arabidopsis Description

MAP65-765-kDa microtubule-associated protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L836]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.