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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G378900.1
TraesCS1B01G400200.1
TraesCS1D01G386100.1
TraesCS2A01G194000.1 nucleus
TraesCS2A01G196600.1
TraesCS2A01G320000.1 nucleus
TraesCS2B01G212800.1 nucleus
TraesCS2B01G224200.1
TraesCS2B01G363300.1 nucleus
TraesCS2D01G193800.1 nucleus
TraesCS2D01G204600.1
TraesCS2D01G343300.1 nucleus
TraesCS3A01G264600.1
TraesCS3B01G297900.1
TraesCS3D01G264700.2
TraesCS4A01G058600.1 nucleus
TraesCS4B01G246100.1 nucleus
TraesCS4D01G245500.2 nucleus
TraesCS5A01G142400.1 nucleus
TraesCS5B01G141100.1 nucleus
TraesCS5D01G149700.1 nucleus
TraesCS6A01G089500.2
TraesCS6B01G111900.1
TraesCSU01G016800.1
TraesCSU01G188700.1 nucleus

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G51600.1 TraesCS2A01G196600.1 AT2G22640.1 25262777
AT5G51600.1 TraesCS2B01G224200.1 AT2G22640.1 25262777
AT5G51600.1 TraesCS2D01G204600.1 AT2G22640.1 25262777
AT5G51600.1 TraesCS2A01G194000.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS2B01G212800.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS2D01G193800.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4A01G058600.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4B01G246100.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4D01G245500.2 AT3G19590.1 25262777
AT5G51600.1 TraesCS2A01G194000.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS2B01G212800.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS2D01G193800.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4A01G058600.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4B01G246100.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4D01G245500.2 AT3G19590.1 25262777
AT5G51600.1 TraesCS2A01G320000.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS2B01G363300.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS2D01G343300.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS2A01G320000.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS2B01G363300.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS2D01G343300.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS5A01G142400.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS5B01G141100.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS5D01G149700.1 AT5G05510.1 25262777
AT5G51600.1 TraesCSU01G188700.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS5A01G142400.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS5B01G141100.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS5D01G149700.1 AT5G05510.1 25262777
AT5G51600.1 TraesCSU01G188700.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS1A01G378900.1 AT5G51600.1 25262777
AT5G51600.1 TraesCS1B01G400200.1 AT5G51600.1 25262777
AT5G51600.1 TraesCS1D01G386100.1 AT5G51600.1 25262777
AT5G51600.1 TraesCS3A01G264600.1 AT5G51600.1 25262777
AT5G51600.1 TraesCS3B01G297900.1 AT5G51600.1 25262777
AT5G51600.1 TraesCS3D01G264700.2 AT5G51600.1 25262777
AT5G51600.1 TraesCS6A01G089500.2 AT5G51600.1 25262777
AT5G51600.1 TraesCS6B01G111900.1 AT5G51600.1 25262777
AT5G51600.1 TraesCSU01G016800.1 AT5G51600.1 25262777
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G386100.1 Wheat cytosol 97.78 97.21
TraesCS1B01G400200.1 Wheat cytosol 96.6 96.04
HORVU1Hr1G083810.7 Barley cytosol 92.17 91.23
TraesCS3A01G264600.1 Wheat cytosol 70.31 69.09
Os05t0552900-01 Rice cytosol 71.2 65.94
GSMUA_Achr5P11340_001 Banana cytosol 62.63 63.57
GSMUA_Achr1P02510_001 Banana cytosol 62.92 63.11
VIT_16s0022g01820.t01 Wine grape nucleus 58.35 54.11
VIT_15s0048g00860.t01 Wine grape cytosol, nucleus, plasma membrane 45.94 51.92
PGSC0003DMT400070431 Potato nucleus 52.44 51.15
KRG92454 Soybean nucleus 54.8 51.03
KRH38719 Soybean cytosol 48.15 50.62
KRH34346 Soybean cytosol 55.69 50.6
Solyc03g007130.2.1 Tomato nucleus 55.24 50.47
Bra023930.1-P Field mustard cytosol 52.44 50.07
PGSC0003DMT400079660 Potato cytosol 55.1 50.07
Bra028266.1-P Field mustard cytosol 52.14 49.93
AT5G51600.1 Thale cress cytosol 51.7 49.51
Solyc11g072280.1.1 Tomato extracellular 55.54 48.77
CDY00270 Canola nucleus 38.11 47.87
CDX86911 Canola nucleus 38.11 47.87
Bra010069.1-P Field mustard nucleus 37.96 47.68
CDX87240 Canola nucleus 37.96 47.5
Bra035900.1-P Field mustard nucleus 37.67 47.13
CDY16786 Canola nucleus 37.67 46.96
AT5G62250.1 Thale cress nucleus 37.37 46.08
TraesCS7A01G405500.1 Wheat cytosol 39.0 45.52
TraesCS6A01G089500.2 Wheat nucleus 35.01 43.25
Solyc01g091380.2.1 Tomato plastid 47.27 43.01
PGSC0003DMT400033224 Potato nucleus 47.86 42.91
TraesCS7A01G223100.1 Wheat cytosol, nucleus, plastid 37.08 42.33
KRH40591 Soybean nucleus 42.98 41.51
AT3G60840.1 Thale cress cytosol 40.92 40.92
CDX89081 Canola cytosol 41.21 40.67
TraesCS1A01G256800.1 Wheat nucleus 34.56 40.62
TraesCS6A01G282800.1 Wheat cytosol 35.01 40.37
Bra014467.1-P Field mustard cytosol 38.55 40.28
CDY62713 Canola cytosol 40.62 40.2
KRH09228 Soybean cytosol 31.31 39.63
TraesCS4A01G074200.2 Wheat nucleus 35.3 39.12
TraesCS5A01G233900.1 Wheat nucleus 33.83 39.08
TraesCS4A01G263800.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 30.72 33.55
TraesCS7A01G260100.2 Wheat nucleus 28.95 33.22
Protein Annotations
EnsemblPlants:TraesCS1A01G378900.1EnsemblPlantsGene:TraesCS1A01G378900Gene3D:1.20.58.1520GO:GO:0000226GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016043InterPro:MAP65_Ase1_PRC1
ncoils:CoilPANTHER:PTHR19321PANTHER:PTHR19321:SF8PFAM:PF03999SEG:segMapMan:13.4.3.5
Description
No Description!
Coordinates
chr1A:-:551313979..551317594
Molecular Weight (calculated)
76151.2 Da
IEP (calculated)
6.260
GRAVY (calculated)
-0.563
Length
677 amino acids
Sequence
(BLAST)
001: MSGGQLLQME TACGALMREL QVIWDEIGEQ GAARDTMLLE LQQECLDAYR RKVDQASRCR AQLRQAIADA QAELAAVCSA MAEPPVLVRQ KGCGLREELN
101: AIVPYLEEMK KRKVERWNQI LDVIGKIKKI SSEIRPADFV PFKAPVDQSD LSCRRLEELR MELQSLEKEK SERLKQVMDY LNTLHSLCKV LAVDFKQTIS
201: DVHPSLDEDG VPMNISNTTI ERLALAIQRL RETKIERMQK LQDLSSTMLE LWNLMDTPIE EQQSFQNITC NIAASEPEIT EANALSIDVM NFVEAEVLRL
301: EQLKVSKMKD LVLKKQTELE EHRRRAHLVG DEHYETQFNI EAIEAGAIDT SLLLEQIEAY IATVKEDAFS RKDILERVER WLNACEEEAW LEDYSKDDNR
401: YNAGRGAHIM LKRAEKARVL VNKIPGIVDV LTNKVIAWEK ERGTEFTYDG VSLLSMLDDY RIVREEKEQE KKRQRDQKKL EDQFKAEQEM LYGSKPSPSS
501: RSNSGKKLTR NPSAGTNRRL SVGGGPVRTP KSVTPQSRSV RSAKKTEDSG TLSPGNRGKG TASPPIKKLS FKASTLGETE TPRKPFTQIA PGNSNPATPV
601: RSASNGTEGE NRTPKILAAP TPKTPMMVTS PMQMTTTPAL TAAPVCVSND KPELCLLEST EYSFEERRLA YLAAHAA
Best Arabidopsis Sequence Match ( AT3G60840.1 )
(BLAST)
001: MIRNSTEQFS RIETTCGLLL RQLQEIWNEM GETEDEKDAS LADIEKECLS VYKRKVEEAS RGKANLLKEI AVGRAEIAAI GSSMGGQEIH SNSRLGENLK
101: EELENVNVQL DGLRKRKAER MIRFNEVIDQ LLKLSLQLGN PTDYLKKFAA EETDLSLQRL EELRSQLGEL QNEKSKRLEE VECLLKTLNS LCSVLGEDFK
201: GMIRGIHSSL VDSNTRDVSR STLDKLDMMI VNLREAKLQR MQKVQDLAVS LLELWNLLDT PAEEQKIFHN VTCSIALTES EITEANILSV ASIKRVEDEV
301: IRLSKIKITK IKEVILRKRL ELEEISRKMH MATEVLKSEN FSVEAIESGV KDPEQLLEQI DSEIAKVKEE ASSRKEILEK VEKWMSACEE ESWLEEYNRD
401: DNRYNAGRGA HLTLKRAEKA RLLVNKLPGM VEALTAKVTA WENERGNEFL YDGVRVLSML GQYKTVWEEK EHEKQRQRDM KKLHGQLITE QEALYGSKPS
501: PNKSGKKPLR TPVNAAMNRK LSLGGAMLHQ SLKHEKATLN SKRTKYYDQN ATSRRDSALP TLSGRRNSEL PGRIRSKNVP VAGKAARSPM LRKPLSPVTS
601: NILNSPEDHH KDAYTTKERI LTPKTNEEKK RAVPTTPAAS VAMTEATTPF TPAVEKRMDE EDVIVEYSFE EVRAGFC
Arabidopsis Description
MAP65-465-kDa microtubule-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZY0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.