Factsheet for Solyc01g091380.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

plastid: 25431925

msms PMID: 25431925 doi

S Muneer, YG Park, A Manivannan, P Soundararajan, BR Jeong

Division of Applied Life Science (BK21 Plus), Gyeongsang National University, Jinju 660-701, Korea. abinayamanivannan@gmail.com., Division of Applied Life Science (BK21 Plus), Gyeongsang National University, Jinju 660-701, Korea. brjeong@gmail.com., Division of Applied Life Science (BK21 Plus), Gyeongsang National University, Jinju 660-701, Korea. iuyiuy09@naver.com., Division of Applied Life Science (BK21 Plus), Gyeongsang National University, Jinju 660-701, Korea. prabhakaran.s.bioinfo@gmail.com., Division of Applied Life Science (BK21 Plus), Gyeongsang National University, Jinju 660-701, Korea. sobiyakhan126@gmail.com.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033224	Potato	nucleus	94.09	92.72
VIT_15s0048g00860.t01	Wine grape	cytosol, nucleus, plasma membrane	43.28	53.76
GSMUA_Achr5P11340_001	Banana	cytosol	45.83	51.12
GSMUA_Achr1P02510_001	Banana	cytosol	46.37	51.11
Solyc03g007130.2.1	Tomato	nucleus	49.33	49.53
GSMUA_Achr5P10040_001	Banana	nucleus	42.07	49.37
Zm00001d030420_P001	Maize	cytosol	14.92	48.47
TraesCS3B01G297900.1	Wheat	cytosol	44.49	47.97
TraesCS3D01G264700.2	Wheat	cytosol	44.35	47.83
TraesCS3A01G264600.1	Wheat	cytosol	44.22	47.75
TraesCS1B01G400200.1	Wheat	cytosol	43.55	47.58
TraesCS1A01G378900.1	Wheat	cytosol	43.01	47.27
Zm00001d011615_P001	Maize	cytosol, nucleus, plastid	44.76	47.23
TraesCS1D01G386100.1	Wheat	cytosol	43.01	46.99
OQU87349	Sorghum	golgi, vacuole	45.03	46.85
Solyc11g072280.1.1	Tomato	extracellular	48.39	46.69
HORVU1Hr1G083810.7	Barley	cytosol	42.2	45.91
Zm00001d043831_P001	Maize	cytosol, mitochondrion	44.35	44.96
Os05t0552900-01	Rice	cytosol	43.41	44.19
HORVU3Hr1G063620.1	Barley	plastid	43.82	43.7
KRH40591	Soybean	nucleus	40.59	43.08
Solyc07g064970.2.1	Tomato	nucleus	33.47	42.86
AT3G60840.1	Thale cress	cytosol	38.04	41.8
Solyc12g014490.1.1	Tomato	cytosol	31.59	41.45
Os02t0126300-01	Rice	plasma membrane	31.05	41.32
CDY62713	Canola	cytosol	37.63	40.94
Solyc05g015320.2.1	Tomato	extracellular	32.39	40.5
Bra014467.1-P	Field mustard	cytosol	35.22	40.43
CDX89081	Canola	cytosol	37.23	40.38
TraesCSU01G016800.1	Wheat	nucleus	28.9	39.09
Zm00001d006888_P001	Maize	cytosol	13.98	38.95
Solyc04g008290.2.1	Tomato	nucleus	31.32	38.83
EES06214	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.51	38.8
TraesCS6A01G089500.2	Wheat	nucleus	28.49	38.69
Solyc01g005080.2.1	Tomato	cytosol	29.03	38.64
TraesCS6B01G111900.1	Wheat	nucleus	28.49	38.62
Solyc01g096680.2.1	Tomato	nucleus	28.9	37.79
Zm00001d053956_P001	Maize	nucleus	29.84	37.25
Zm00001d015096_P002	Maize	nucleus	29.44	35.84
Zm00001d046884_P001	Maize	plastid	17.74	27.5

Protein Annotations

EnsemblPlants:Solyc01g091380.2.1	EnsemblPlantsGene:Solyc01g091380.2	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF7	PFAM:PF03999
SEG:seg	UniParc:UPI00027681E2	UniProt:K4AZ78	MapMan:35.1	:	:

Description

65-kDa microtubule-associated protein 4 [Source:Projected from Arabidopsis thaliana (AT3G60840) UniProtKB/Swiss-Prot;Acc:Q9LZY0]

Coordinates

chr1:-:85010458..85014667

Molecular Weight (calculated)

84589.0 Da

IEP (calculated)

9.037

GRAVY (calculated)

-0.561

Length

744 amino acids

Sequence
(BLAST)

001: METTCGSLLS EMQRIWDEMG EPDIERDKML FELQQECLEA YRRKVNQASR CRAQLRQTVA DSEAEIAKIC AALGEQSSYA RQISRSLKEE LEAIKPKLEE
101: MKRRKGERMN QFAAVVDQIQ TFSKELCLHF QENAQMSVID ENDLSVRRLE EMQNYLLALQ KEKSDRLKLL VDHLTTINSL CVVLGVDYKQ TISEVDPTLE
201: DSRVLKNISK DMIFKLSAMI NRLEELKKQR LLRLQDLATT LIQLWSLMDT PLEEQQKFYD FTRHIAASEN EINEPNVLSA DSLQHAEAEV SRLQAMKSTK
301: MKEVLLRKRL ELEEICRKAH LVIETQNSVD FSVEAIESGT IDPSYLLEQI EVQIAKVKEE TFSRREILEK LEKWLAACDE ECWLEEYNRD ENRYHGGKGT
401: HRNLKRAEKA RVLVNKIPAM VETLRLRTSA WQKERGHEFL YDGVAVLYML EQYCVLKQER ELERQRQRDQ KKLQGQLMVE QEALFGSIPS PSKSAKKNFR
501: PSMGGLTNKR LSLGGSMLQI PYAGKPAPSS RLSSSLKQQT PQSGRRDSIL APRKNQGNLY PPCTPRTELV QTRKAPLNPP RTKSAQIRKG PLNPPKNATT
601: QTRKPLSPLS SLLSSNASTI NIQNQTLKSG VVQEALYLNR TPVMTPTKIT TAEGRLKETV SFNKTPIITP TKIASAVEGS ITPKTLPIPM PATPSSVSTA
701: MQTAMTPSSR HVSACADNIE YSFEERRTGY VPLPHANVIT KCLI

Best Arabidopsis Sequence Match ( AT5G51600.1 )
(BLAST)

001: MASVQKDPIL QVETTCGSLL FELQIIWDEV GETETDRDQM LLELERECLE VYRRKVDQAN RCRAQLRQAI ADAEAQLAAI CSAMGERPVH IRQSDQSVGS
101: LKQELGRILP ELEEMQKRKV ERRNQFIVVM EQIDSITNDI KGQGELVHSE PLIDETNLSM RKLEELHCQL QVLQKEKIDR VETIRKHLCT LYSHCSVLGM
201: DFNEVVGQVN PTLSDPEGPR SLSDHTIEKL GAAVQKLMEV KIQRMQRLQD LATTMLELWN LMDTPIEEQQ EYQHITCNIA ASEHEITEAN SLSEDFIKYV
301: EAEVVRLDEV KASKMKELVL KKRSELEEIC RKTHLLPVSD SAIDQTIVAI ESGIVDATMV LEHLEQHISK IKEEALSRKE ILERVEKWLS ACDEESWLEE
401: YNRDDNRYNA GRGAHLTLKR AEKARNLVTK LPGMVEALAS KTIVWEQENG IEFLYDGIRL LSMLEEYNIL RQEREEEHRR QRDQKKLQGQ LIAEQEALYG
501: SKPSPSKPLG GKKAPRMSTG GASNRRLSLG AAMHQTPKPN KKADHRHNDG ALSNGRRGLD IAGLPSRKQS MNPSEMLQSP LVRKPFSPIS TTVVASKANI
601: ATTTTQQLPK NNAVNEISSF ATPIKNNNIL RNLEEEKMMT MMMQTPKNVA AMIPIPSTPA TVSVPMHTAP TPFTNNARLM SEKPEVVEYS FEERRLAFML
701: QSECRLV

Arabidopsis Description

MAP65-365-kDa microtubule-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.