Factsheet for Zm00001d046884_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003249_P001	nucleus
Zm00001d006888_P001
Zm00001d011615_P001
Zm00001d015096_P002
Zm00001d023279_P001	nucleus
Zm00001d025721_P001	nucleus
Zm00001d030420_P001
Zm00001d043831_P001
Zm00001d046884_P001
Zm00001d053956_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51600.1	Zm00001d003249_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d025721_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d003249_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d025721_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d023279_P001	AT5G05510.1	25262777
AT5G51600.1	Zm00001d023279_P001	AT5G05510.1	25262777
AT5G51600.1	Zm00001d006888_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d011615_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d015096_P002	AT5G51600.1	25262777
AT5G51600.1	Zm00001d030420_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d043831_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d046884_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d053956_P001	AT5G51600.1	25262777

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006888_P001	Maize	cytosol	45.21	81.27
Zm00001d030420_P001	Maize	cytosol	20.62	43.23
Zm00001d011615_P001	Maize	cytosol, nucleus, plastid	45.62	31.06
OQU87349	Sorghum	golgi, vacuole	44.79	30.07
Zm00001d043831_P001	Maize	cytosol, mitochondrion	45.42	29.7
TraesCS3B01G297900.1	Wheat	cytosol	40.83	28.41
TraesCS3A01G264600.1	Wheat	cytosol	40.62	28.3
TraesCS3D01G264700.2	Wheat	cytosol	40.62	28.26
HORVU3Hr1G063620.1	Barley	plastid	40.21	25.87
Zm00001d003920_P001	Maize	cytosol	7.08	24.64
Zm00001d004213_P001	Maize	cytosol	7.71	24.5
GSMUA_Achr5P11340_001	Banana	cytosol	33.96	24.44
Zm00001d007926_P001	Maize	cytosol	8.12	24.38
GSMUA_Achr1P02510_001	Banana	cytosol	33.54	23.85
Bra010069.1-P	Field mustard	nucleus	26.67	23.75
CDY00270	Canola	nucleus	26.67	23.75
CDX86911	Canola	nucleus	26.46	23.56
Bra035900.1-P	Field mustard	nucleus	26.46	23.48
CDX87240	Canola	nucleus	26.46	23.48
CDY16786	Canola	nucleus	26.46	23.39
Zm00001d030008_P005	Maize	cytosol	22.71	23.29
VIT_16s0022g01820.t01	Wine grape	nucleus	34.79	22.88
VIT_15s0048g00860.t01	Wine grape	cytosol, nucleus, plasma membrane	28.33	22.7
AT5G62250.1	Thale cress	nucleus	25.62	22.4
KRH09228	Soybean	cytosol	24.79	22.24
KRH38719	Soybean	cytosol	29.79	22.2
PGSC0003DMT400079660	Potato	cytosol	33.96	21.88
AT5G51600.1	Thale cress	cytosol	31.88	21.64
Zm00001d028363_P001	Maize	cytosol	27.5	21.6
Bra023930.1-P	Field mustard	cytosol	31.88	21.58
Bra028266.1-P	Field mustard	cytosol	31.46	21.36
Solyc03g007130.2.1	Tomato	nucleus	32.92	21.32
KRG92454	Soybean	nucleus	32.29	21.32
KRH34346	Soybean	cytosol	32.71	21.07
PGSC0003DMT400070431	Potato	nucleus	30.21	20.89
Solyc11g072280.1.1	Tomato	extracellular	32.92	20.49
Zm00001d031619_P001	Maize	nucleus	25.0	20.3
Zm00001d038174_P002	Maize	cytosol	25.83	20.23
Zm00001d037413_P002	Maize	cytosol	26.46	20.13
AT3G60840.1	Thale cress	cytosol	27.92	19.79
Zm00001d020685_P002	Maize	cytosol	26.46	19.75
KRH40591	Soybean	nucleus	28.75	19.69
CDX89081	Canola	cytosol	27.92	19.53
Zm00001d047347_P031	Maize	cytosol	22.08	19.49
Bra014467.1-P	Field mustard	cytosol	26.25	19.44
Zm00001d015096_P002	Maize	nucleus	24.58	19.31
CDY62713	Canola	cytosol	27.5	19.3
Zm00001d053956_P001	Maize	nucleus	23.96	19.3
Zm00001d029060_P002	Maize	cytosol, nucleus, plasma membrane	18.33	19.17
Zm00001d045864_P004	Maize	mitochondrion	26.67	18.91
Zm00001d030102_P004	Maize	cytosol	22.5	18.21
PGSC0003DMT400033224	Potato	nucleus	27.92	17.75
Solyc01g091380.2.1	Tomato	plastid	27.5	17.74
Zm00001d049816_P001	Maize	nucleus	8.33	14.65
Zm00001d033794_P001	Maize	nucleus	24.79	11.78

Protein Annotations

Gene3D:1.20.58.1520	MapMan:35.1	UniProt:A0A1Q1CV78	ProteinID:AQL05146.1	ncoils:Coil	GO:GO:0000226
GO:GO:0000910	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	PANTHER:PTHR19321
PANTHER:PTHR19321:SF8	UniParc:UPI00097E4090	EnsemblPlantsGene:Zm00001d046884	EnsemblPlants:Zm00001d046884_P001	EnsemblPlants:Zm00001d046884_T001	SEG:seg

Description

65-kDa microtubule-associated protein 3

Coordinates

chr9:+:108820598..108832931

Molecular Weight (calculated)

53302.5 Da

IEP (calculated)

8.128

GRAVY (calculated)

-0.388

Length

480 amino acids

Sequence
(BLAST)

001: MLPPPPLSFV SSAEPATTPD SRRSTSTSCW PPQMRPPLSD PTTASHPLSP PASRLPAASL RSSASWSSSS PAPAPIGMAT SRLLRDRWTL WCCRSRLLWP
101: SSSRSRRGRQ LSPSTSLWLL KSNQKLQGLR EELNAIVPYL EEMRKKKVER WDQFVDVIEQ IKKVASEIRP ADFVPFRISM DQSNLSLRKL EELTKELQSL
201: QKEKVHLYDI TLQIRPAISV DFGESLIKAA VADPNGHDVY VGTGIGDLCF LRHENRWTLN PYMSGAVDPT LVLVQIEAHI ATVKEEAFSR KDILEKVERW
301: LNACEEDAWL EDYNKVAMLD DNRYNAGRGA HLTLKRAEKA RILVNKILGL VDVLTTKIVA WEAERGKEFT YDGNQVQSGS SSLGSSGMLY EGSSGDNAPF
401: DINDFPQLTG RPNSAGGGQG QYGSLRKHGV SVNAIVQQNQ EFSIQNEDFP ALPGNKGVCS PITIASLIMH VIEKKELTLV

Best Arabidopsis Sequence Match ( AT3G60840.1 )
(BLAST)

001: MIRNSTEQFS RIETTCGLLL RQLQEIWNEM GETEDEKDAS LADIEKECLS VYKRKVEEAS RGKANLLKEI AVGRAEIAAI GSSMGGQEIH SNSRLGENLK
101: EELENVNVQL DGLRKRKAER MIRFNEVIDQ LLKLSLQLGN PTDYLKKFAA EETDLSLQRL EELRSQLGEL QNEKSKRLEE VECLLKTLNS LCSVLGEDFK
201: GMIRGIHSSL VDSNTRDVSR STLDKLDMMI VNLREAKLQR MQKVQDLAVS LLELWNLLDT PAEEQKIFHN VTCSIALTES EITEANILSV ASIKRVEDEV
301: IRLSKIKITK IKEVILRKRL ELEEISRKMH MATEVLKSEN FSVEAIESGV KDPEQLLEQI DSEIAKVKEE ASSRKEILEK VEKWMSACEE ESWLEEYNRD
401: DNRYNAGRGA HLTLKRAEKA RLLVNKLPGM VEALTAKVTA WENERGNEFL YDGVRVLSML GQYKTVWEEK EHEKQRQRDM KKLHGQLITE QEALYGSKPS
501: PNKSGKKPLR TPVNAAMNRK LSLGGAMLHQ SLKHEKATLN SKRTKYYDQN ATSRRDSALP TLSGRRNSEL PGRIRSKNVP VAGKAARSPM LRKPLSPVTS
601: NILNSPEDHH KDAYTTKERI LTPKTNEEKK RAVPTTPAAS VAMTEATTPF TPAVEKRMDE EDVIVEYSFE EVRAGFC

Arabidopsis Description

MAP65-465-kDa microtubule-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZY0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.