Factsheet for Zm00001d043831_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003249_P001	nucleus
Zm00001d006888_P001
Zm00001d011615_P001
Zm00001d015096_P002
Zm00001d023279_P001	nucleus
Zm00001d025721_P001	nucleus
Zm00001d030420_P001
Zm00001d043831_P001
Zm00001d046884_P001
Zm00001d053956_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51600.1	Zm00001d003249_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d025721_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d003249_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d025721_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d023279_P001	AT5G05510.1	25262777
AT5G51600.1	Zm00001d023279_P001	AT5G05510.1	25262777
AT5G51600.1	Zm00001d006888_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d011615_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d015096_P002	AT5G51600.1	25262777
AT5G51600.1	Zm00001d030420_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d043831_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d046884_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d053956_P001	AT5G51600.1	25262777

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030420_P001	Maize	cytosol	28.88	92.58
Zm00001d011615_P001	Maize	cytosol, nucleus, plastid	88.01	91.63
TraesCS3A01G264600.1	Wheat	cytosol	76.16	81.13
TraesCS3D01G264700.2	Wheat	cytosol	76.16	81.01
TraesCS3B01G297900.1	Wheat	cytosol	76.02	80.87
HORVU3Hr1G063620.1	Barley	plastid	75.75	74.53
GSMUA_Achr1P02510_001	Banana	cytosol	60.76	66.07
GSMUA_Achr5P11340_001	Banana	cytosol	59.95	65.97
Zm00001d006888_P001	Maize	cytosol	23.16	63.67
VIT_16s0022g01820.t01	Wine grape	nucleus	59.26	59.59
KRG92454	Soybean	nucleus	55.59	56.12
Solyc03g007130.2.1	Tomato	nucleus	56.54	56.01
VIT_15s0048g00860.t01	Wine grape	cytosol, nucleus, plasma membrane	45.64	55.93
PGSC0003DMT400079660	Potato	cytosol	56.54	55.7
KRH34346	Soybean	cytosol	55.86	55.03
PGSC0003DMT400070431	Potato	nucleus	51.91	54.9
KRH38719	Soybean	cytosol	47.82	54.5
Bra023930.1-P	Field mustard	cytosol	52.59	54.44
AT5G51600.1	Thale cress	cytosol	52.32	54.31
Bra028266.1-P	Field mustard	cytosol	52.04	54.03
Zm00001d029060_P002	Maize	cytosol, nucleus, plasma membrane	32.7	52.29
Solyc11g072280.1.1	Tomato	extracellular	54.09	51.49
Bra010069.1-P	Field mustard	nucleus	37.6	51.21
CDX86911	Canola	nucleus	37.6	51.21
CDY00270	Canola	nucleus	37.6	51.21
Bra035900.1-P	Field mustard	nucleus	37.74	51.2
CDY16786	Canola	nucleus	37.74	51.01
CDX87240	Canola	nucleus	37.47	50.83
AT5G62250.1	Thale cress	nucleus	37.74	50.46
Zm00001d030008_P005	Maize	cytosol	31.34	49.15
Zm00001d047347_P031	Maize	cytosol	35.42	47.79
Zm00001d046884_P001	Maize	plastid	29.7	45.42
Zm00001d030102_P004	Maize	cytosol	35.97	44.52
Solyc01g091380.2.1	Tomato	plastid	44.96	44.35
PGSC0003DMT400033224	Potato	nucleus	45.1	43.84
KRH09228	Soybean	cytosol	31.61	43.36
KRH40591	Soybean	nucleus	41.28	43.22
Bra014467.1-P	Field mustard	cytosol	37.06	41.98
CDX89081	Canola	cytosol	38.96	41.69
Zm00001d037413_P002	Maize	cytosol	35.83	41.68
CDY62713	Canola	cytosol	38.83	41.67
AT3G60840.1	Thale cress	cytosol	38.42	41.65
Zm00001d053956_P001	Maize	nucleus	33.79	41.61
Zm00001d015096_P002	Maize	nucleus	34.06	40.92
Zm00001d028363_P001	Maize	cytosol	33.24	39.93
Zm00001d045864_P004	Maize	mitochondrion	35.42	38.4
Zm00001d020685_P002	Maize	cytosol	33.38	38.1
Zm00001d031619_P001	Maize	nucleus	29.16	36.21
Zm00001d038174_P002	Maize	cytosol	29.97	35.89
Zm00001d004213_P001	Maize	cytosol	6.27	30.46
Zm00001d007926_P001	Maize	cytosol	6.54	30.0
Zm00001d003920_P001	Maize	cytosol	5.59	29.71
Zm00001d049816_P001	Maize	nucleus	10.49	28.21
Zm00001d033794_P001	Maize	nucleus	28.61	20.79

Protein Annotations

Gene3D:1.20.58.1520	MapMan:13.4.3.5	UniProt:A0A1D6NFB7	ncoils:Coil	GO:GO:0000226	GO:GO:0000910
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ProteinID:ONM39171.1	PFAM:PF03999	PANTHER:PTHR19321
PANTHER:PTHR19321:SF8	UniParc:UPI000842AA55	EnsemblPlantsGene:Zm00001d043831	EnsemblPlants:Zm00001d043831_P001	EnsemblPlants:Zm00001d043831_T001	SEG:seg

Description

65-kDa microtubule-associated protein 3

Coordinates

chr3:-:211089173..211094146

Molecular Weight (calculated)

82708.1 Da

IEP (calculated)

6.361

GRAVY (calculated)

-0.506

Length

734 amino acids

Sequence
(BLAST)

001: MHSPLRGSPR FREGAAMSSA VKDQLQQMST TYDSLLLELN VFSPGLCQMI WDEVGEPDMA RDRMLLELEQ EWLDVYRRKV DQANRCRAQL RQAIADAEAE
101: LAGICSAMSE PPIHVRQSNQ KLHGLREELN AIVPYLEEMR KKKVERWDQF VDVIEQIKKV ASEIRPSDFV PFIIPVDQSD LSLRKLDELT KELQSLQKEK
201: SDRLKQVMEH LSTLHLLCEV LGVDFKQTVY EVHPSLGEAD GSKNLSNSTI ERLASAVNRL RELKVQRMQK LQDLASSMLE LWNLMDTPLE EQQMFQNLTC
301: NIAASEHEIT GPNTLSTDFL SYVESEVLRL EQLKASKMKD LVLKKKTELE DHRRRAHLIG EEGYAAEFSD EAIEAGAVDP ALVLEQIEAH IATVKEEAFS
401: RKDILEKVER WLNACEEEAW LEDYNKVATL DDNRYNAGRG AHLTLKRAEK ARILVNKIPG LVDVLTTKIV AWETERGKEF TYDGVRLRSM LEDYIIIRQE
501: KELEKKRQRD QKKIQDQLKA EQEALYGSKP SPSKTQSTKK VPRQSMGGAN RRLSLGGATT QAPKTDIMHS KTARAAKKAE DLGALSPSSR GLDIAGLPIK
601: KLSFNASTLR EAETPRKPFA QIMPGNNVSS MPARPISNDT EEENKTPKTF AGLNPKTPVT VTAPMQLAVT PAVANKVIAT PATLFQEKAE SPALPGDIEY
701: SFEERRLAVY LARQVAFFVH SPSPSCANTQ LLLS

Best Arabidopsis Sequence Match ( AT5G51600.1 )
(BLAST)

001: MASVQKDPIL QVETTCGSLL FELQIIWDEV GETETDRDQM LLELERECLE VYRRKVDQAN RCRAQLRQAI ADAEAQLAAI CSAMGERPVH IRQSDQSVGS
101: LKQELGRILP ELEEMQKRKV ERRNQFIVVM EQIDSITNDI KGQGELVHSE PLIDETNLSM RKLEELHCQL QVLQKEKIDR VETIRKHLCT LYSHCSVLGM
201: DFNEVVGQVN PTLSDPEGPR SLSDHTIEKL GAAVQKLMEV KIQRMQRLQD LATTMLELWN LMDTPIEEQQ EYQHITCNIA ASEHEITEAN SLSEDFIKYV
301: EAEVVRLDEV KASKMKELVL KKRSELEEIC RKTHLLPVSD SAIDQTIVAI ESGIVDATMV LEHLEQHISK IKEEALSRKE ILERVEKWLS ACDEESWLEE
401: YNRDDNRYNA GRGAHLTLKR AEKARNLVTK LPGMVEALAS KTIVWEQENG IEFLYDGIRL LSMLEEYNIL RQEREEEHRR QRDQKKLQGQ LIAEQEALYG
501: SKPSPSKPLG GKKAPRMSTG GASNRRLSLG AAMHQTPKPN KKADHRHNDG ALSNGRRGLD IAGLPSRKQS MNPSEMLQSP LVRKPFSPIS TTVVASKANI
601: ATTTTQQLPK NNAVNEISSF ATPIKNNNIL RNLEEEKMMT MMMQTPKNVA AMIPIPSTPA TVSVPMHTAP TPFTNNARLM SEKPEVVEYS FEERRLAFML
701: QSECRLV

Arabidopsis Description

MAP65-365-kDa microtubule-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.