Factsheet for Bra023930.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009117.1-P	nucleus
Bra017340.1-P	nucleus
Bra023930.1-P
Bra025176.1-P	nucleus
Bra028266.1-P
Bra030221.1-P
Bra038220.1-P	nucleus
Bra039922.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51600.1	Bra030221.1-P	AT2G22640.1	25262777
AT5G51600.1	Bra039922.1-P	AT2G22640.1	25262777
AT5G51600.1	Bra038220.1-P	AT3G19590.1	25262777
AT5G51600.1	Bra038220.1-P	AT3G19590.1	25262777
AT5G51600.1	Bra017340.1-P	AT3G25980.1	25262777
AT5G51600.1	Bra025176.1-P	AT3G25980.1	25262777
AT5G51600.1	Bra017340.1-P	AT3G25980.1	25262777
AT5G51600.1	Bra025176.1-P	AT3G25980.1	25262777
AT5G51600.1	Bra009117.1-P	AT5G05510.1	25262777
AT5G51600.1	Bra009117.1-P	AT5G05510.1	25262777
AT5G51600.1	Bra023930.1-P	AT5G51600.1	25262777
AT5G51600.1	Bra028266.1-P	AT5G51600.1	25262777

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028266.1-P	Field mustard	cytosol	98.59	98.87
AT5G51600.1	Thale cress	cytosol	88.29	88.54
VIT_16s0022g01820.t01	Wine grape	nucleus	65.87	63.97
KRG92454	Soybean	nucleus	62.62	61.07
Solyc03g007130.2.1	Tomato	nucleus	62.91	60.19
KRH38719	Soybean	cytosol	54.58	60.09
KRH34346	Soybean	cytosol	62.76	59.73
PGSC0003DMT400079660	Potato	cytosol	62.62	59.6
GSMUA_Achr5P11340_001	Banana	cytosol	55.15	58.62
GSMUA_Achr1P02510_001	Banana	cytosol	55.15	57.93
PGSC0003DMT400070431	Potato	nucleus	56.14	57.35
TraesCS3D01G264700.2	Wheat	cytosol	54.44	55.94
TraesCS3B01G297900.1	Wheat	cytosol	54.44	55.94
TraesCS3A01G264600.1	Wheat	cytosol	54.3	55.88
GSMUA_Achr5P10040_001	Banana	nucleus	49.93	55.84
Bra010069.1-P	Field mustard	nucleus	42.17	55.47
Zm00001d011615_P001	Maize	cytosol, nucleus, plastid	54.87	55.18
Bra035900.1-P	Field mustard	nucleus	42.03	55.08
OQU87349	Sorghum	golgi, vacuole	55.43	54.97
Solyc11g072280.1.1	Tomato	extracellular	59.52	54.73
Zm00001d043831_P001	Maize	cytosol, mitochondrion	54.44	52.59
TraesCS1A01G378900.1	Wheat	cytosol	50.07	52.44
TraesCS1B01G400200.1	Wheat	cytosol	50.35	52.42
TraesCS1D01G386100.1	Wheat	cytosol	50.35	52.42
HORVU3Hr1G063620.1	Barley	plastid	54.3	51.61
Os05t0552900-01	Rice	cytosol	53.17	51.57
HORVU1Hr1G083810.7	Barley	cytosol	48.94	50.73
Zm00001d030420_P001	Maize	cytosol	16.36	50.66
KRH09228	Soybean	cytosol	36.81	48.78
Os02t0126300-01	Rice	plasma membrane	36.53	46.33
Bra002922.1-P	Field mustard	cytosol	37.09	44.96
Bra028986.1-P	Field mustard	cytosol	36.39	43.88
TraesCSU01G016800.1	Wheat	nucleus	33.71	43.45
TraesCS6A01G089500.2	Wheat	nucleus	33.57	43.43
Bra026405.1-P	Field mustard	cytosol	34.7	43.23
Bra035564.1-P	Field mustard	cytosol	35.68	43.1
Zm00001d006888_P001	Maize	cytosol	16.22	43.07
Bra010428.1-P	Field mustard	cytosol	35.26	42.96
Bra014467.1-P	Field mustard	cytosol	39.21	42.9
TraesCS6B01G111900.1	Wheat	nucleus	33.0	42.62
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	35.4	42.18
EES06214	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.7	42.05
Bra024843.1-P	Field mustard	nucleus	35.68	41.61
Zm00001d053956_P001	Maize	nucleus	34.7	41.28
Bra017106.1-P	Field mustard	nucleus	31.45	40.62
Zm00001d015096_P002	Maize	nucleus	34.41	39.93
Bra032853.1-P	Field mustard	cytosol	28.63	33.61
Zm00001d046884_P001	Maize	plastid	21.58	31.88
Bra026625.1-P	Field mustard	mitochondrion	15.23	28.12

Protein Annotations

EnsemblPlants:Bra023930.1	EnsemblPlants:Bra023930.1-P	EnsemblPlantsGene:Bra023930	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF7
PFAM:PF03999	SEG:seg	UniParc:UPI00025448E9	UniProt:M4E576	MapMan:13.4.3.5	:

Description

AT5G51600 (E=1e-315) PLE, ATMAP65-3, MAP65-3 | PLE (PLEIADE); microtubule binding

Coordinates

chrA01:+:21121661..21124613

Molecular Weight (calculated)

80283.5 Da

IEP (calculated)

5.930

GRAVY (calculated)

-0.555

Length

709 amino acids

Sequence
(BLAST)

001: MAKDPILQVE TTCGSLLYEL QVIIWDEVGE TETDRDKMLL ELERECLEVY RRKVDQANRC RAQLRQAIAD AEAELAAICS AMGERPVHTR QSDQSLGSLK
101: QELGTILPEL EEMQKRKTER RNQFLFVLEE IENITNDIKG QGQLVLPKPP IDETDLSLRK LEELHCHLQA LQKEKSDRVE TIRKHLCTLY SHCSVLGMDF
201: NEVVSQVNPT LTDPEGPRSL SDHTIDTLDA AVQKLREVKI QRMQKLQDLA TTMLELWNLM DTPIEEQQEY QHITCNIAAS EHEITQANSL SEDFIKYVEA
301: EVVRLGEVKA SKMKELVMKK RSELEEICRK THMLPVSDSA MDQTIVAIES GIVDATLVLE HLEQHISKVK EEALSRKEIL EKVEKWLSAC DEESWLEEYN
401: RDDNRYNAGR GAHLTLKRAE KARNLVNKLP VMVEALASKT IVWEQEKGIE FLYDGIRLLS MLEEYNLLRQ EREEEHRRQR DHKKLQGQLI AEQEALYGSK
501: PSPSKPLGGK KAPRMSTGGA ATNRRLSLGA GMHQTPKPNK KADQRQAEGA LSTGRRGLDV AGLPSRKQSM NPCEQLQSPL VRKPFSPIST TVVASKANIA
601: TPQQLVPSSK SNAVNEISSF ATPVKNNNII KNLEEEKIMM MMQTPKNVAA MIPIPSTPAT ISVPMQTAPT PLNNNNNARF LPEKAEVIEY SFEERRLAFM
701: LQSESPIHV

Best Arabidopsis Sequence Match ( AT5G51600.1 )
(BLAST)

001: MASVQKDPIL QVETTCGSLL FELQIIWDEV GETETDRDQM LLELERECLE VYRRKVDQAN RCRAQLRQAI ADAEAQLAAI CSAMGERPVH IRQSDQSVGS
101: LKQELGRILP ELEEMQKRKV ERRNQFIVVM EQIDSITNDI KGQGELVHSE PLIDETNLSM RKLEELHCQL QVLQKEKIDR VETIRKHLCT LYSHCSVLGM
201: DFNEVVGQVN PTLSDPEGPR SLSDHTIEKL GAAVQKLMEV KIQRMQRLQD LATTMLELWN LMDTPIEEQQ EYQHITCNIA ASEHEITEAN SLSEDFIKYV
301: EAEVVRLDEV KASKMKELVL KKRSELEEIC RKTHLLPVSD SAIDQTIVAI ESGIVDATMV LEHLEQHISK IKEEALSRKE ILERVEKWLS ACDEESWLEE
401: YNRDDNRYNA GRGAHLTLKR AEKARNLVTK LPGMVEALAS KTIVWEQENG IEFLYDGIRL LSMLEEYNIL RQEREEEHRR QRDQKKLQGQ LIAEQEALYG
501: SKPSPSKPLG GKKAPRMSTG GASNRRLSLG AAMHQTPKPN KKADHRHNDG ALSNGRRGLD IAGLPSRKQS MNPSEMLQSP LVRKPFSPIS TTVVASKANI
601: ATTTTQQLPK NNAVNEISSF ATPIKNNNIL RNLEEEKMMT MMMQTPKNVA AMIPIPSTPA TVSVPMHTAP TPFTNNARLM SEKPEVVEYS FEERRLAFML
701: QSECRLV

Arabidopsis Description

MAP65-365-kDa microtubule-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.