Factsheet for Zm00001d053956_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003249_P001	nucleus
Zm00001d006888_P001
Zm00001d011615_P001
Zm00001d015096_P002
Zm00001d023279_P001	nucleus
Zm00001d025721_P001	nucleus
Zm00001d030420_P001
Zm00001d043831_P001
Zm00001d046884_P001
Zm00001d053956_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51600.1	Zm00001d003249_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d025721_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d003249_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d025721_P001	AT3G25980.1	25262777
AT5G51600.1	Zm00001d023279_P001	AT5G05510.1	25262777
AT5G51600.1	Zm00001d023279_P001	AT5G05510.1	25262777
AT5G51600.1	Zm00001d006888_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d011615_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d015096_P002	AT5G51600.1	25262777
AT5G51600.1	Zm00001d030420_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d043831_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d046884_P001	AT5G51600.1	25262777
AT5G51600.1	Zm00001d053956_P001	AT5G51600.1	25262777

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06214	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	82.38	83.93
Zm00001d015096_P002	Maize	nucleus	81.54	79.54
Os02t0126300-01	Rice	plasma membrane	64.6	68.87
TraesCSU01G016800.1	Wheat	nucleus	55.7	60.36
TraesCS6B01G111900.1	Wheat	nucleus	55.37	60.11
TraesCS6A01G089500.2	Wheat	nucleus	55.2	60.04
CDX86911	Canola	nucleus	36.91	40.82
CDY00270	Canola	nucleus	36.74	40.63
Bra010069.1-P	Field mustard	nucleus	36.74	40.63
Zm00001d030420_P001	Maize	cytosol	15.27	39.74
AT5G62250.1	Thale cress	nucleus	36.58	39.71
CDX87240	Canola	nucleus	35.74	39.37
Bra035900.1-P	Field mustard	nucleus	35.57	39.19
VIT_15s0048g00860.t01	Wine grape	cytosol, nucleus, plasma membrane	39.26	39.07
CDY16786	Canola	nucleus	35.57	39.04
VIT_16s0022g01820.t01	Wine grape	nucleus	45.3	36.99
KRH38719	Soybean	cytosol	39.77	36.8
PGSC0003DMT400079660	Potato	cytosol	44.13	35.3
Zm00001d011615_P001	Maize	cytosol, nucleus, plastid	41.44	35.04
PGSC0003DMT400070431	Potato	nucleus	40.77	35.01
Solyc03g007130.2.1	Tomato	nucleus	43.46	34.95
KRH34346	Soybean	cytosol	43.62	34.9
KRG92454	Soybean	nucleus	42.45	34.8
Bra028266.1-P	Field mustard	cytosol	41.28	34.79
Bra023930.1-P	Field mustard	cytosol	41.28	34.7
AT5G51600.1	Thale cress	cytosol	40.77	34.37
Zm00001d043831_P001	Maize	cytosol, mitochondrion	41.61	33.79
Solyc11g072280.1.1	Tomato	extracellular	42.11	32.56
Zm00001d006888_P001	Maize	cytosol	14.43	32.21
Zm00001d028363_P001	Maize	cytosol	32.38	31.59
Zm00001d037413_P002	Maize	cytosol	33.39	31.54
Bra014467.1-P	Field mustard	cytosol	34.23	31.48
Zm00001d038174_P002	Maize	cytosol	32.21	31.32
KRH09228	Soybean	cytosol	28.02	31.21
AT3G60840.1	Thale cress	cytosol	35.07	30.87
CDY62713	Canola	cytosol	35.23	30.7
CDX89081	Canola	cytosol	35.07	30.47
Zm00001d020685_P002	Maize	cytosol	32.55	30.17
Zm00001d031619_P001	Maize	nucleus	29.87	30.12
Solyc01g091380.2.1	Tomato	plastid	37.25	29.84
KRH40591	Soybean	nucleus	35.07	29.81
Zm00001d045864_P004	Maize	mitochondrion	33.72	29.69
PGSC0003DMT400033224	Potato	nucleus	37.25	29.4
Zm00001d029060_P002	Maize	cytosol, nucleus, plasma membrane	22.15	28.76
Zm00001d030008_P005	Maize	cytosol	22.32	28.42
Zm00001d047347_P031	Maize	cytosol	25.0	27.39
Zm00001d007926_P001	Maize	cytosol	7.21	26.88
Zm00001d003920_P001	Maize	cytosol	6.04	26.09
Zm00001d030102_P004	Maize	cytosol	25.84	25.97
Zm00001d004213_P001	Maize	cytosol	6.54	25.83
Zm00001d046884_P001	Maize	plastid	19.3	23.96
Zm00001d049816_P001	Maize	nucleus	8.56	18.68
Zm00001d033794_P001	Maize	nucleus	30.87	18.22

Protein Annotations

Gene3D:1.20.58.1520	EntrezGene:100381554	MapMan:35.1	UniProt:A0A1D6QTV5	ProteinID:AQK60846.1	ncoils:Coil
GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	PFAM:PF03999
PANTHER:PTHR19321	PANTHER:PTHR19321:SF13	UniParc:UPI000843D741	EnsemblPlantsGene:Zm00001d053956	EnsemblPlants:Zm00001d053956_P001	EnsemblPlants:Zm00001d053956_T001
SEG:seg	:	:	:	:	:

Description

65-kDa microtubule-associated protein 3

Coordinates

chr4:-:244186748..244189967

Molecular Weight (calculated)

66361.1 Da

IEP (calculated)

6.462

GRAVY (calculated)

-0.639

Length

596 amino acids

Sequence
(BLAST)

001: MDPRREELLH ELGGMWDEIG EAEEDRRGML QALEEECLNV YRAKLEKVRQ HRAQLKREIA DSVAEVAAIC ATIGEPPSTV HTACSSLQVN ANQCTRARIQ
101: SSAAVMMSTV TADRDQGTGS LKEELGLIAP ELAEMRRRRD ERRRQFADVA QRVNKIQQEM DLQLGGGGGQ GQPHAHVAVD GSDLTTTKLD ELRAYLRRLQ
201: QEKESRTKKV AELMATLHSS SLVLGMDPRE TNSVVHGGVQ TQASGISDSA ISGLAGGIER LREIKRSRME KLQDLLGSML ELWNLMDTPA EEQRRFQGVA
301: CNIAASEDEI TEPGALSMAF IRNVEAEVMR LENLKECRMR ELVVKKHEEL KEIRRRARLP EDDTTVMVFD AMDSDAERAM ILERLELQIS KAKDLEFSRK
401: DVLEKMDRWQ AALEEESWLE EYSRNENRYN TGKGTHLVLK RAEKARSLVC KMPAMAEALV AKVVAWEKER GARFEYDGEV LLDLLEDYGN ARKEKEQERK
501: RQRDQRRLVQ GAAAADRDVS SPVARPPPKA IKNVTRSLSI GRNAAAAAAA GGGGSPRKAA PASSRPGTPS FLKSPLSARR GGGDEGAQML SPDSFE

Best Arabidopsis Sequence Match ( AT5G51600.1 )
(BLAST)

001: MASVQKDPIL QVETTCGSLL FELQIIWDEV GETETDRDQM LLELERECLE VYRRKVDQAN RCRAQLRQAI ADAEAQLAAI CSAMGERPVH IRQSDQSVGS
101: LKQELGRILP ELEEMQKRKV ERRNQFIVVM EQIDSITNDI KGQGELVHSE PLIDETNLSM RKLEELHCQL QVLQKEKIDR VETIRKHLCT LYSHCSVLGM
201: DFNEVVGQVN PTLSDPEGPR SLSDHTIEKL GAAVQKLMEV KIQRMQRLQD LATTMLELWN LMDTPIEEQQ EYQHITCNIA ASEHEITEAN SLSEDFIKYV
301: EAEVVRLDEV KASKMKELVL KKRSELEEIC RKTHLLPVSD SAIDQTIVAI ESGIVDATMV LEHLEQHISK IKEEALSRKE ILERVEKWLS ACDEESWLEE
401: YNRDDNRYNA GRGAHLTLKR AEKARNLVTK LPGMVEALAS KTIVWEQENG IEFLYDGIRL LSMLEEYNIL RQEREEEHRR QRDQKKLQGQ LIAEQEALYG
501: SKPSPSKPLG GKKAPRMSTG GASNRRLSLG AAMHQTPKPN KKADHRHNDG ALSNGRRGLD IAGLPSRKQS MNPSEMLQSP LVRKPFSPIS TTVVASKANI
601: ATTTTQQLPK NNAVNEISSF ATPIKNNNIL RNLEEEKMMT MMMQTPKNVA AMIPIPSTPA TVSVPMHTAP TPFTNNARLM SEKPEVVEYS FEERRLAFML
701: QSECRLV

Arabidopsis Description

MAP65-365-kDa microtubule-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.