Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62713 | Canola | cytosol | 84.34 | 83.48 |
| CDX89081 | Canola | cytosol | 83.6 | 82.51 |
| Bra014467.1-P | Field mustard | cytosol | 78.14 | 81.64 |
| VIT_15s0048g00860.t01 | Wine grape | cytosol, nucleus, plasma membrane | 41.95 | 47.41 |
| Zm00001d030420_P001 | Maize | cytosol | 15.51 | 45.85 |
| GSMUA_Achr5P11340_001 | Banana | cytosol | 44.61 | 45.28 |
| GSMUA_Achr1P02510_001 | Banana | cytosol | 44.9 | 45.04 |
| GSMUA_Achr5P10040_001 | Banana | nucleus | 42.1 | 44.95 |
| AT5G62250.1 | Thale cress | nucleus | 36.04 | 44.44 |
| Zm00001d006888_P001 | Maize | cytosol | 16.54 | 41.95 |
| AT5G51600.1 | Thale cress | cytosol | 42.98 | 41.16 |
| Zm00001d011615_P001 | Maize | cytosol, nucleus, plastid | 42.84 | 41.13 |
| TraesCS3A01G264600.1 | Wheat | cytosol | 41.8 | 41.07 |
| TraesCS3D01G264700.2 | Wheat | cytosol | 41.8 | 41.01 |
| TraesCS3B01G297900.1 | Wheat | cytosol | 41.8 | 41.01 |
| OQU87349 | Sorghum | golgi, vacuole | 43.28 | 40.98 |
| TraesCS1B01G400200.1 | Wheat | cytosol | 41.21 | 40.97 |
| TraesCS1A01G378900.1 | Wheat | cytosol | 40.92 | 40.92 |
| TraesCS1D01G386100.1 | Wheat | cytosol | 41.06 | 40.82 |
| AT4G26760.1 | Thale cress | cytosol | 34.56 | 40.48 |
| KRH40591 | Soybean | nucleus | 41.51 | 40.09 |
| HORVU1Hr1G083810.7 | Barley | cytosol | 39.88 | 39.47 |
| AT1G14690.1 | Thale cress | cytosol | 35.01 | 39.3 |
| AT2G01910.1 | Thale cress | nucleus | 35.16 | 39.14 |
| Os02t0126300-01 | Rice | plasma membrane | 31.91 | 38.64 |
| AT5G55230.2 | Thale cress | cytosol | 35.01 | 38.47 |
| Zm00001d043831_P001 | Maize | cytosol, mitochondrion | 41.65 | 38.42 |
| TraesCSU01G016800.1 | Wheat | nucleus | 31.17 | 38.36 |
| TraesCS6B01G111900.1 | Wheat | nucleus | 30.87 | 38.07 |
| Solyc01g091380.2.1 | Tomato | plastid | 41.8 | 38.04 |
| TraesCS6A01G089500.2 | Wheat | nucleus | 30.58 | 37.77 |
| Os05t0552900-01 | Rice | cytosol | 40.62 | 37.62 |
| HORVU3Hr1G063620.1 | Barley | plastid | 41.36 | 37.53 |
| AT2G38720.1 | Thale cress | nucleus | 30.43 | 37.45 |
| PGSC0003DMT400033224 | Potato | nucleus | 41.65 | 37.35 |
| Zm00001d053956_P001 | Maize | nucleus | 30.87 | 35.07 |
| EES06214 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.28 | 35.04 |
| Zm00001d015096_P002 | Maize | nucleus | 30.87 | 34.21 |
| AT1G27920.1 | Thale cress | nucleus | 27.92 | 33.63 |
| Zm00001d046884_P001 | Maize | plastid | 19.79 | 27.92 |
Protein Annotations
| Gene3D:1.20.58.1520 | MapMan:35.1 | EntrezGene:825255 | ProteinID:AEE80116.2 | ArrayExpress:AT3G60840 | EnsemblPlantsGene:AT3G60840 |
| RefSeq:AT3G60840 | TAIR:AT3G60840 | RefSeq:AT3G60840-TAIR-G | EnsemblPlants:AT3G60840.1 | TAIR:AT3G60840.1 | ProteinID:CAB82688.1 |
| ncoils:Coil | GO:GO:0000226 | GO:GO:0000910 | GO:GO:0000922 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005856 | GO:GO:0005874 | GO:GO:0007049 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0051301 | Symbol:MAP65-4 | InterPro:MAP65_Ase1_PRC1 | RefSeq:NP_001319808.1 | PFAM:PF03999 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF7 | UniProt:Q9LZY0 | UniParc:UPI0001D89745 | SEG:seg |
Description
MAP65-465-kDa microtubule-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZY0]
Coordinates
chr3:-:22477573..22480980
Molecular Weight (calculated)
76943.3 Da
IEP (calculated)
7.316
GRAVY (calculated)
-0.642
Length
677 amino acids
Sequence
(BLAST)
(BLAST)
001: MIRNSTEQFS RIETTCGLLL RQLQEIWNEM GETEDEKDAS LADIEKECLS VYKRKVEEAS RGKANLLKEI AVGRAEIAAI GSSMGGQEIH SNSRLGENLK
101: EELENVNVQL DGLRKRKAER MIRFNEVIDQ LLKLSLQLGN PTDYLKKFAA EETDLSLQRL EELRSQLGEL QNEKSKRLEE VECLLKTLNS LCSVLGEDFK
201: GMIRGIHSSL VDSNTRDVSR STLDKLDMMI VNLREAKLQR MQKVQDLAVS LLELWNLLDT PAEEQKIFHN VTCSIALTES EITEANILSV ASIKRVEDEV
301: IRLSKIKITK IKEVILRKRL ELEEISRKMH MATEVLKSEN FSVEAIESGV KDPEQLLEQI DSEIAKVKEE ASSRKEILEK VEKWMSACEE ESWLEEYNRD
401: DNRYNAGRGA HLTLKRAEKA RLLVNKLPGM VEALTAKVTA WENERGNEFL YDGVRVLSML GQYKTVWEEK EHEKQRQRDM KKLHGQLITE QEALYGSKPS
501: PNKSGKKPLR TPVNAAMNRK LSLGGAMLHQ SLKHEKATLN SKRTKYYDQN ATSRRDSALP TLSGRRNSEL PGRIRSKNVP VAGKAARSPM LRKPLSPVTS
601: NILNSPEDHH KDAYTTKERI LTPKTNEEKK RAVPTTPAAS VAMTEATTPF TPAVEKRMDE EDVIVEYSFE EVRAGFC
101: EELENVNVQL DGLRKRKAER MIRFNEVIDQ LLKLSLQLGN PTDYLKKFAA EETDLSLQRL EELRSQLGEL QNEKSKRLEE VECLLKTLNS LCSVLGEDFK
201: GMIRGIHSSL VDSNTRDVSR STLDKLDMMI VNLREAKLQR MQKVQDLAVS LLELWNLLDT PAEEQKIFHN VTCSIALTES EITEANILSV ASIKRVEDEV
301: IRLSKIKITK IKEVILRKRL ELEEISRKMH MATEVLKSEN FSVEAIESGV KDPEQLLEQI DSEIAKVKEE ASSRKEILEK VEKWMSACEE ESWLEEYNRD
401: DNRYNAGRGA HLTLKRAEKA RLLVNKLPGM VEALTAKVTA WENERGNEFL YDGVRVLSML GQYKTVWEEK EHEKQRQRDM KKLHGQLITE QEALYGSKPS
501: PNKSGKKPLR TPVNAAMNRK LSLGGAMLHQ SLKHEKATLN SKRTKYYDQN ATSRRDSALP TLSGRRNSEL PGRIRSKNVP VAGKAARSPM LRKPLSPVTS
601: NILNSPEDHH KDAYTTKERI LTPKTNEEKK RAVPTTPAAS VAMTEATTPF TPAVEKRMDE EDVIVEYSFE EVRAGFC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.