Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017106.1-P | Field mustard | nucleus | 82.36 | 82.51 |
| CDY18372 | Canola | nucleus | 82.0 | 76.44 |
| CDX93308 | Canola | nucleus | 81.64 | 76.23 |
| VIT_13s0084g00080.t01 | Wine grape | cytosol, nucleus, plastid | 59.64 | 58.36 |
| KRH20613 | Soybean | cytosol | 57.45 | 55.73 |
| Solyc01g096680.2.1 | Tomato | nucleus | 55.64 | 53.78 |
| PGSC0003DMT400008510 | Potato | plastid | 48.18 | 52.89 |
| GSMUA_Achr9P17360_001 | Banana | cytosol | 54.36 | 51.46 |
| KXG21994 | Sorghum | cytosol | 48.73 | 46.85 |
| TraesCS1D01G256000.1 | Wheat | cytosol | 45.82 | 46.84 |
| TraesCS1B01G267200.2 | Wheat | cytosol | 48.36 | 46.18 |
| TraesCS1A01G256800.1 | Wheat | nucleus | 48.0 | 45.83 |
| Os05t0409400-01 | Rice | cytosol, nucleus, plastid | 50.0 | 45.53 |
| AT4G26760.1 | Thale cress | cytosol | 45.82 | 43.6 |
| Zm00001d038174_P002 | Maize | cytosol | 48.36 | 43.39 |
| AT5G55230.2 | Thale cress | cytosol | 46.55 | 41.56 |
| HORVU1Hr1G063330.5 | Barley | golgi | 47.82 | 41.48 |
| AT2G01910.1 | Thale cress | nucleus | 42.55 | 38.49 |
| AT1G14690.1 | Thale cress | cytosol | 42.18 | 38.47 |
| AT1G27920.1 | Thale cress | nucleus | 38.55 | 37.72 |
| Zm00001d007926_P001 | Maize | cytosol | 10.91 | 37.5 |
| Zm00001d004213_P001 | Maize | cytosol | 9.82 | 35.76 |
| AT5G62250.1 | Thale cress | nucleus | 35.27 | 35.34 |
| Zm00001d003920_P001 | Maize | cytosol | 8.55 | 34.06 |
| AT5G51600.1 | Thale cress | cytosol | 40.0 | 31.12 |
| AT3G60840.1 | Thale cress | cytosol | 37.45 | 30.43 |
Protein Annotations
| Gene3D:1.20.58.1520 | MapMan:35.1 | EntrezGene:818454 | ProteinID:AAC67346.1 | ProteinID:AEC09577.2 | ArrayExpress:AT2G38720 |
| EnsemblPlantsGene:AT2G38720 | RefSeq:AT2G38720 | TAIR:AT2G38720 | RefSeq:AT2G38720-TAIR-G | EnsemblPlants:AT2G38720.1 | TAIR:AT2G38720.1 |
| ncoils:Coil | GO:GO:0000226 | GO:GO:0000910 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005819 |
| GO:GO:0005856 | GO:GO:0005874 | GO:GO:0005938 | GO:GO:0007049 | GO:GO:0008017 | GO:GO:0008150 |
| GO:GO:0009506 | GO:GO:0009524 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030054 | GO:GO:0051301 |
| Symbol:MAP65-5 | InterPro:MAP65_Ase1_PRC1 | RefSeq:NP_001318376.1 | PFAM:PF03999 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0007611 | PO:PO:0009010 | PO:PO:0009046 |
| PO:PO:0025195 | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF4 | UniProt:Q9ZVJ3 | UniParc:UPI0001D89746 | SEG:seg |
Description
MAP65-565-kDa microtubule-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ3]
Coordinates
chr2:+:16188047..16192102
Molecular Weight (calculated)
62656.5 Da
IEP (calculated)
6.735
GRAVY (calculated)
-0.731
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPSSTTTCT SLLEELQMIW DEIGESYNER DKMLLELEQE CLDIYNKKVE KTRKFRAELQ RSLAQAEAEI ASLMSALGEK VSFAKKEGSL KEQISSVKPV
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.