CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0084g00080.t01	Wine grape	cytosol, nucleus, plastid	67.55	68.15
PGSC0003DMT400008510	Potato	plastid	53.26	60.28
Solyc01g096680.2.1	Tomato	nucleus	59.61	59.4
GSMUA_Achr9P17360_001	Banana	cytosol	59.08	57.66
AT2G38720.1	Thale cress	nucleus	55.73	57.45
Bra017106.1-P	Field mustard	nucleus	53.62	55.37
CDY18372	Canola	nucleus	53.79	51.69
CDX93308	Canola	nucleus	53.62	51.61
TraesCS1D01G256000.1	Wheat	cytosol	47.97	50.56
KXG21994	Sorghum	cytosol	50.79	50.35
TraesCS1B01G267200.2	Wheat	cytosol	50.97	50.17
TraesCS1A01G256800.1	Wheat	nucleus	50.97	50.17
KRH73815	Soybean	cytosol	51.32	50.0
KRH14311	Soybean	endoplasmic reticulum	51.32	49.32
Os05t0409400-01	Rice	cytosol, nucleus, plastid	51.32	48.18
Zm00001d038174_P002	Maize	cytosol	51.5	47.63
KRH14315	Soybean	cytosol, endoplasmic reticulum	49.56	47.15
KRG98677	Soybean	cytosol	36.16	46.7
HORVU1Hr1G063330.5	Barley	golgi	51.5	46.06
KRH09582	Soybean	cytosol, mitochondrion, nucleus	11.46	43.05
KRH46253	Soybean	nucleus	23.46	42.22
KRG97427	Soybean	cytosol	39.15	40.29
KRH46955	Soybean	cytosol	19.93	39.93
KRH01846	Soybean	extracellular	24.16	39.6
Zm00001d007926_P001	Maize	cytosol	11.11	39.38
KRG99429	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	9.35	39.26
KRH31473	Soybean	cytosol	40.74	38.89
KRH40910	Soybean	cytosol, mitochondrion, nucleus	40.74	38.44
Zm00001d004213_P001	Maize	cytosol	10.23	38.41
KRG89099	Soybean	cytosol	40.56	38.27
Zm00001d003920_P001	Maize	cytosol	8.99	36.96
KRH33387	Soybean	cytosol	7.41	36.52
KRH38719	Soybean	cytosol	38.62	34.01
KRG92454	Soybean	nucleus	42.5	33.15
KRH34346	Soybean	cytosol	42.15	32.08
KRH40591	Soybean	nucleus	36.86	29.81
KRH09228	Soybean	cytosol	27.16	28.79

Protein Annotations

Gene3D:1.20.58.1520	EntrezGene:100815235	MapMan:35.1	EMBL:ACUP02008281	ncoils:Coil	EnsemblPlantsGene:GLYMA_13G189600
GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	UniProt:I1M0K4	EnsemblPlants:KRH20613
ProteinID:KRH20613	ProteinID:KRH20613.1	InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF4
UniParc:UPI000233D793	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:30303686..30310705

Molecular Weight (calculated)

64792.2 Da

IEP (calculated)

6.846

GRAVY (calculated)

-0.663

Length

567 amino acids

Sequence
(BLAST)

001: MAATPPSFSP SRTTCASLLR ELQMIWDEIG ESDNDRDNTL LQLEQECLDI YHRRVEETRK HKADLYQWLA EAEAEVANIV SSLGECTILP RGKGTLKQQI
101: ATIRPVIEDL RSKKDDRIKE FSKIKSQISQ ICAEIAGCGQ YNSVTDSDNQ SDLTTKKLRE LKSHLQELQN EKILRQQKVK SHISTISELT VVMSMDFRET
201: LNEIHPSLGD SSKGTLQSIS NDTLARLTGV IHSLKREKQK RLQKIQELAK LLVELWELME TPIEDQQAFS HVTRLISASV DEVSTECCLS AEVIEQVEVE
301: VQRLNVVKAS KMKDLVFKRQ NELEEIYRGV HMDVDSEAAR QILTSLIESG NIDLSDLLQS MDDQIRQAKE QALSRRDILD RVEKWKFAAE EEKWLDEYER
401: DENRYSAVRG AHKNLKRAEK ARILVSKLPS IVENLTAKVK AWEMEKGIPF LYEKVPLLHN LDEYIVQRQL REEEKRKYRE QKRLQEQHAV EQEALFGSRS
501: ATKKPLGQST HANTILGTPT GRRMLSTPSG RHGNSGGKDR RESGRVNSII PVNYVALPKD DSVSRGN

Best Arabidopsis Sequence Match ( AT2G38720.1 )
(BLAST)

001: MSPSSTTTCT SLLEELQMIW DEIGESYNER DKMLLELEQE CLDIYNKKVE KTRKFRAELQ RSLAQAEAEI ASLMSALGEK VSFAKKEGSL KEQISSVKPV
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD

Arabidopsis Description

MAP65-565-kDa microtubule-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.