Factsheet for HORVU1Hr1G063330.5

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
TargetP:	secretory
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G267200.2	Wheat	cytosol	87.22	96.01
TraesCS1D01G256000.1	Wheat	cytosol	80.44	94.8
TraesCS1A01G256800.1	Wheat	nucleus	86.12	94.79
Os05t0409400-01	Rice	cytosol, nucleus, plastid	73.82	77.48
KXG21994	Sorghum	cytosol	67.82	75.17
Zm00001d038174_P002	Maize	cytosol	68.45	70.8
Zm00001d003920_P001	Maize	cytosol	14.83	68.12
Zm00001d004213_P001	Maize	cytosol	15.93	66.89
Zm00001d007926_P001	Maize	cytosol	16.88	66.88
GSMUA_Achr9P17360_001	Banana	cytosol	53.63	58.52
VIT_13s0084g00080.t01	Wine grape	cytosol, nucleus, plastid	50.63	57.12
PGSC0003DMT400008510	Potato	plastid	41.32	52.3
KRH20613	Soybean	cytosol	46.06	51.5
Solyc01g096680.2.1	Tomato	nucleus	45.74	50.97
AT2G38720.1	Thale cress	nucleus	41.48	47.82
Bra017106.1-P	Field mustard	nucleus	40.69	46.99
HORVU7Hr1G094860.1	Barley	cytosol	40.54	44.31
CDX93308	Canola	nucleus	40.69	43.8
CDY18372	Canola	nucleus	40.54	43.56
HORVU7Hr1G045770.7	Barley	endoplasmic reticulum	38.64	40.03
HORVU6Hr1G070900.6	Barley	cytosol	36.28	38.98
HORVU1Hr1G083810.7	Barley	cytosol	35.33	32.75
HORVU4Hr1G064580.2	Barley	endoplasmic reticulum, nucleus, plastid	35.96	31.58
HORVU3Hr1G063620.1	Barley	plastid	36.75	31.23
HORVU4Hr1G008440.3	Barley	nucleus	34.54	30.98
HORVU7Hr1G054130.4	Barley	mitochondrion	31.7	30.23

Protein Annotations

EnsemblPlants:HORVU1Hr1G063330.5	EnsemblPlantsGene:HORVU1Hr1G063330	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF4	PFAM:PF03999
SEG:seg	UniParc:UPI000B46DB0E	UniProt:A0A287FXV2	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr1H:+:454529963..454536198

Molecular Weight (calculated)

71212.7 Da

IEP (calculated)

6.658

GRAVY (calculated)

-0.535

Length

634 amino acids

Sequence
(BLAST)

001: QTPYLSSPPS FAVPFLLPLL PFQILSPLPI NLGEGAAADH SQSPDLSGPS SIAPASSSMA TPPSPPPPTR ASCGSFLQEL QELWGEIGPD ELERDRMILQ
101: LEEDCLNVYR KKVEQTRKQK TDLLQVMSLG EAEIGKILSA LGERESFSRA EKLGGTLMEQ LAKLEPVLDD LRRRRDERIN EFLAVQLHIV RLQAEISGTI
201: NHGDPAAPLV DETDLSTGRL AELKTQLNEL QTEKNLRLQK IDGQIKCINE MCNMMSLDLK KTLYEVHPSF VELERIKAMS ISDSTLDRLA GKVHALNQEK
301: KQRLRKLQDL GSTLIELWSL MDTPLHEQKC FDHVTSLISV SPNTVMPQGC LAHDLIEKVE VEVKRLKHLK ASKMKELVLK KMTELEEIYR SVHMDIDSDH
401: EWRILTELID SGRADLSELL TDMDDRITEA RDLALSRKDI LEKVEKWTLA TEEEGWLGEY EGDQNRYNAG RGAHINLKRA EKARVLVSKI PSLLENLTAK
501: VRAWEKEKGA PFLYNKMRLL DSLDKYTSER QQKEEEKRRS RELKKLQEQF AAEQGATYGA KPSPMRPLSA RKPLGQSTNV NIVGGTPNNR RVSTPISRKG
601: GLSCGKMKDT GKTAASIPAN YVSLPKDCSD NSCM

Best Arabidopsis Sequence Match ( AT2G38720.1 )
(BLAST)

001: MSPSSTTTCT SLLEELQMIW DEIGESYNER DKMLLELEQE CLDIYNKKVE KTRKFRAELQ RSLAQAEAEI ASLMSALGEK VSFAKKEGSL KEQISSVKPV
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD

Arabidopsis Description

MAP65-565-kDa microtubule-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.