Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G231800.3 | Wheat | nucleus | 83.38 | 98.53 |
| TraesCS4B01G230500.2 | Wheat | nucleus | 82.55 | 97.55 |
| TraesCS4A01G074200.2 | Wheat | nucleus | 81.86 | 96.73 |
| EER92583 | Sorghum | cytosol | 72.71 | 85.92 |
| Os03t0237600-04 | Rice | nucleus | 72.02 | 85.25 |
| Zm00001d028363_P001 | Maize | cytosol | 71.19 | 84.12 |
| GSMUA_Achr10P... | Banana | nucleus | 51.11 | 61.09 |
| VIT_01s0011g06330.t01 | Wine grape | nucleus | 49.03 | 59.1 |
| KRG89099 | Soybean | cytosol | 48.2 | 57.9 |
| KRH40910 | Soybean | cytosol, mitochondrion, nucleus | 48.06 | 57.74 |
| KRH09582 | Soybean | cytosol, mitochondrion, nucleus | 12.05 | 57.62 |
| PGSC0003DMT400058659 | Potato | cytosol, plastid | 47.92 | 57.57 |
| Solyc01g005080.2.1 | Tomato | cytosol | 44.46 | 57.42 |
| PGSC0003DMT400075869 | Potato | nucleus | 47.51 | 57.26 |
| Solyc04g008290.2.1 | Tomato | nucleus | 47.37 | 57.0 |
| CDY17624 | Canola | nucleus | 47.51 | 56.41 |
| Bra024843.1-P | Field mustard | nucleus | 47.37 | 56.25 |
| KRH46955 | Soybean | cytosol | 22.02 | 56.18 |
| CDY15798 | Canola | endoplasmic reticulum, golgi | 32.27 | 55.21 |
| Bra026811.1-P | Field mustard | cytosol, nucleus, plastid | 45.43 | 55.13 |
| CDY33748 | Canola | cytosol | 45.57 | 55.11 |
| CDX81663 | Canola | cytosol | 45.43 | 54.85 |
| AT2G01910.1 | Thale cress | nucleus | 46.12 | 54.77 |
| AT1G14690.1 | Thale cress | cytosol | 45.71 | 54.73 |
| GSMUA_Achr6P05980_001 | Banana | cytosol | 44.6 | 54.12 |
| KRH01846 | Soybean | extracellular | 25.62 | 53.47 |
| CDY03090 | Canola | nucleus | 45.98 | 53.46 |
| HORVU7Hr1G094860.1 | Barley | cytosol | 36.43 | 45.34 |
| HORVU4Hr1G008440.3 | Barley | nucleus | 41.83 | 42.72 |
| HORVU7Hr1G045770.7 | Barley | endoplasmic reticulum | 34.9 | 41.18 |
| HORVU6Hr1G070900.6 | Barley | cytosol | 31.86 | 38.98 |
| GSMUA_Achr2P21660_001 | Banana | endoplasmic reticulum, extracellular | 48.34 | 36.81 |
| HORVU1Hr1G063330.5 | Barley | golgi | 31.58 | 35.96 |
| HORVU1Hr1G083810.7 | Barley | cytosol | 31.86 | 33.63 |
| Bra026625.1-P | Field mustard | mitochondrion | 17.73 | 33.33 |
| HORVU3Hr1G063620.1 | Barley | plastid | 34.07 | 32.98 |
| HORVU7Hr1G054130.4 | Barley | mitochondrion | 29.36 | 31.88 |
| CDY09401 | Canola | endoplasmic reticulum, golgi, plasma membrane | 21.19 | 26.89 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G064580.2 | EnsemblPlantsGene:HORVU4Hr1G064580 | Gene3D:1.20.58.1520 | GO:GO:0000226 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:MAP65_Ase1_PRC1 |
| ncoils:Coil | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF12 | PFAM:PF03999 | SEG:seg | SignalP:SignalP-noTM |
| UniParc:UPI000B4755B2 | UniProt:A0A287PD70 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:540692630..540698556
Molecular Weight (calculated)
81764.1 Da
IEP (calculated)
7.608
GRAVY (calculated)
-0.648
Length
722 amino acids
Sequence
(BLAST)
(BLAST)
001: LITSLLLSLP FSYALLPTAP DRDPYITRQP PLPLQPRGAV CRAARREKGE KGWWLRIPGG RRALGLDFLV LPFARTAGPS SARGRRVQSE GAAGVSPSAS
101: TAASSFFWRE EMGETAMAGY GLDRPARCSV SFDTPCGSLL RELEQIWTEI GEREQDKDRM FQELEAECMH VYRRKVDSAN ADRSQLRQSV MAKEAELKAL
201: VASIGENTTQ FKVNEKHASL KEQLAAVTPL LDDLRAMKDE RIKQFSNVQS QIETINAQIS DHNYQHDDGS SKRLNNDHDL STRRLADLQM QLRNLQKEKS
301: DRLQKVFVYV DEVHCLCAVL GMDFAKTVKD VHPSLHGTNS DNSTNISDST LEGLTQTILK LKAEKRTRVS KLQEIVGKLH KLWNLMESTE QERRHFSEVA
401: AVLGSSEEEI TSPSVLSLET IQETEEEVER LTKQKASRMK ELVLKRRVEL ENICRNAHME PDTSTSPEKI VALIDSGLVD PCELLSNIEV QIAKANEESH
501: TRKDIMERVD KWLSACDEET WLEEYNQDDN RYSAGRGAHL NLKRAEKARL LVQKIPTMID NLIDKTFAWE DESNTPFLYD GVRLVAILEE QKLRRVQKEE
601: DKKRYRDQKK LQNLLLKEKE LIFGSKSVPR KTSSFNRRTS GHHPNGNGSG FMTPMPRRVS AGSATPELLT PRSYSGRYNN YFKENRRMTV APLNFSMASK
701: DDSMSSFASI SGSEPDSPLV LH
101: TAASSFFWRE EMGETAMAGY GLDRPARCSV SFDTPCGSLL RELEQIWTEI GEREQDKDRM FQELEAECMH VYRRKVDSAN ADRSQLRQSV MAKEAELKAL
201: VASIGENTTQ FKVNEKHASL KEQLAAVTPL LDDLRAMKDE RIKQFSNVQS QIETINAQIS DHNYQHDDGS SKRLNNDHDL STRRLADLQM QLRNLQKEKS
301: DRLQKVFVYV DEVHCLCAVL GMDFAKTVKD VHPSLHGTNS DNSTNISDST LEGLTQTILK LKAEKRTRVS KLQEIVGKLH KLWNLMESTE QERRHFSEVA
401: AVLGSSEEEI TSPSVLSLET IQETEEEVER LTKQKASRMK ELVLKRRVEL ENICRNAHME PDTSTSPEKI VALIDSGLVD PCELLSNIEV QIAKANEESH
501: TRKDIMERVD KWLSACDEET WLEEYNQDDN RYSAGRGAHL NLKRAEKARL LVQKIPTMID NLIDKTFAWE DESNTPFLYD GVRLVAILEE QKLRRVQKEE
601: DKKRYRDQKK LQNLLLKEKE LIFGSKSVPR KTSSFNRRTS GHHPNGNGSG FMTPMPRRVS AGSATPELLT PRSYSGRYNN YFKENRRMTV APLNFSMASK
701: DDSMSSFASI SGSEPDSPLV LH
001: MLEIESPTSL CFRTNTTCNA LLRELQKIWV DIGESDAEKD RMLMELEKEC LEIYRRKVDE AANSKAQLHQ SLVSIEAEIA SLLAALGVFN SHSPMKAKEG
101: SKSLKEKLAA VRPMLEDLRL QKDERMKQFV DIKAQIEKMS GEISGYSDQL NKTMVGSLAL DEQDLTLRKL NEYQTHLRSL QKEKSDRLNK VLDYVNEVHT
201: LCGVLGVDFG QTVSEVHPSL HRTDHEQSTN ISDDTLDGLH HMIHKLKTER SVRFQKLKDV AGSLFELWNL MDTSQEERTK FASVSYVVRS SESDITEPNI
301: LSSETIEQVS AEVDCFNKLK ASRMKELVMK RRTELENLCR LAHIEADTST SLEKSTALID SGLVDPSELL TNIELHINKI KEEAHSRKEI IDRIDRWLSA
401: CEEENWLEEY NQDETRYSAG RGGHVNLKHA ERARITVNKI PSMVDNLIKK TLLWEDETRK SFLYDGVRLV SILEDYKLTR KQQEEEKRRY RDQKKMQDLL
501: IKRRESIYGS KPSPRRSNSV RKTNGYNGDA SVPPTPRRNS AGATNNDIMT TPRSYSSHRQ NGYFKEVRRL STAPLNFVAI PKEDSVSTYT SVCGSEPDSP
601: LYN
101: SKSLKEKLAA VRPMLEDLRL QKDERMKQFV DIKAQIEKMS GEISGYSDQL NKTMVGSLAL DEQDLTLRKL NEYQTHLRSL QKEKSDRLNK VLDYVNEVHT
201: LCGVLGVDFG QTVSEVHPSL HRTDHEQSTN ISDDTLDGLH HMIHKLKTER SVRFQKLKDV AGSLFELWNL MDTSQEERTK FASVSYVVRS SESDITEPNI
301: LSSETIEQVS AEVDCFNKLK ASRMKELVMK RRTELENLCR LAHIEADTST SLEKSTALID SGLVDPSELL TNIELHINKI KEEAHSRKEI IDRIDRWLSA
401: CEEENWLEEY NQDETRYSAG RGGHVNLKHA ERARITVNKI PSMVDNLIKK TLLWEDETRK SFLYDGVRLV SILEDYKLTR KQQEEEKRRY RDQKKMQDLL
501: IKRRESIYGS KPSPRRSNSV RKTNGYNGDA SVPPTPRRNS AGATNNDIMT TPRSYSSHRQ NGYFKEVRRL STAPLNFVAI PKEDSVSTYT SVCGSEPDSP
601: LYN
Arabidopsis Description
MAP65-765-kDa microtubule-associated protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L836]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.