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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G261100.1 Wheat nucleus 87.07 98.14
TraesCS7A01G260100.2 Wheat nucleus 86.62 97.63
TraesCS7B01G158100.1 Wheat cytosol, mitochondrion, nucleus 86.47 97.46
Os08t0531100-01 Rice cytosol 57.74 78.69
EES15312 Sorghum cytosol 69.32 78.0
Zm00001d031619_P001 Maize nucleus 67.37 75.8
Zm00001d049816_P001 Maize nucleus 27.67 67.4
GSMUA_Achr11P... Banana nucleus 51.88 60.0
VIT_01s0010g03540.t01 Wine grape cytosol 47.67 55.91
KRG97427 Soybean cytosol 44.36 53.54
KRH31473 Soybean cytosol 45.86 51.35
Solyc05g015320.2.1 Tomato extracellular 45.56 50.92
PGSC0003DMT400074853 Potato cytosol 45.41 50.76
AT1G27920.1 Thale cress nucleus 41.8 49.47
CDX84899 Canola extracellular, nucleus, plastid 40.6 47.04
CDY27637 Canola cytosol 40.3 47.02
Bra032853.1-P Field mustard cytosol 40.0 44.04
HORVU7Hr1G094860.1 Barley cytosol 35.19 40.34
HORVU6Hr1G070900.6 Barley cytosol 33.38 37.63
HORVU7Hr1G045770.7 Barley endoplasmic reticulum 33.98 36.93
HORVU1Hr1G063330.5 Barley golgi 30.23 31.7
HORVU4Hr1G064580.2 Barley endoplasmic reticulum, nucleus, plastid 31.88 29.36
HORVU4Hr1G008440.3 Barley nucleus 30.53 28.71
HORVU1Hr1G083810.7 Barley cytosol 28.42 27.63
HORVU3Hr1G063620.1 Barley plastid 30.83 27.48
Protein Annotations
Gene3D:1.20.58.1520MapMan:35.1UniProt:A0A287WJD2ncoils:CoilGO:GO:0000226GO:GO:0000910
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005819GO:GO:0005856GO:GO:0005874GO:GO:0007049GO:GO:0008017
GO:GO:0008150GO:GO:0009524GO:GO:0009987GO:GO:0016043EnsemblPlantsGene:HORVU7Hr1G054130EnsemblPlants:HORVU7Hr1G054130.4
InterPro:MAP65_Ase1_PRC1PFAM:PF03999PANTHER:PTHR19321PANTHER:PTHR19321:SF3UniParc:UPI000B478A4DSEG:seg
Description
No Description!
Coordinates
chrchr7H:+:215040274..215045086
Molecular Weight (calculated)
76685.9 Da
IEP (calculated)
7.944
GRAVY (calculated)
-0.703
Length
665 amino acids
Sequence
(BLAST)
001: SQPSNAGSKQ VGVARPFGLL PRFFYFTSRL SEVLAMGSLR TAGTAQRLAL PESSSTYLLQ ELKMIWDEVG QEENERERIL EELEQECQEV YRRKVNSANM
101: LRIQLHQALA ESEAEFTNLL LSLGERSFPG RPEKMNGTLK EQLNSITPAL QEMQMKKEAR LKQFTEVQAE VERIASEIAG RSENEVVTVN EDDLSLKKLE
201: EHQSDLQRLK REKGDRLCKV EEYKVLICNF SKIMGMDPSN VLASVHPSLL IGANEQQKKN ISDDILNKLN TMVQQLKEEK NHRLEKLHSL GKALTNLWNI
301: LDITMEERQP YEQINIFSLT SANGMLGPGS LRLEKIQQIE SEVQRLDQLK ASKMKELFIK KKAEIEEICK ISHMDVPYQT EMDNIMELIM SGDVDHDNLL
401: KTMDGYIYKT KEEATSRKEI MDKVEKWITS CDEERWLEEY SRDERRYSVS RGAHRHLKRA ERARIIANKI PGLVELLIAK TEIWEHGRKK IFYYDELPLL
501: EMLKQYMLTL KEKEEERCRQ RVSGYCSIGV YRKLPNMAHN CVNVSLRLEN ITSQVDKFSL QENKKVQTQL VKRNENSFLS RPNTGCSRPS SRGFNTSHRS
601: TSFSSHRVSS VDQQPISDNS AEKDMHIRKV RDRSMQSKVG NNRSCTVHDE DKTSGISTKQ GLSSI
Best Arabidopsis Sequence Match ( AT1G27920.1 )
(BLAST)
001: MGSLQTPIEM RSSSLLDTSC GYLLRELQMI WDEVGEDKFE REKVLLDIEQ ECVEAYRRKV DHANVSRSRL HQELAESEAE LTHFLLCLGE RSVPGRPEKK
101: GGTLREQLDS IAPALREMRL RKDERVKQFR SVKGEIQKIS AEIAGRSTYE DSTRKITIDD NDLSNKKLEE YQNELHRLHD EKNERLQKVD IYICAIRDLS
201: ATLGTEASMI ITKIHPSLND LYGISKNISD DILKKLNGTV VSLEEEKHKR LEKLHHLGRA LSNLWNLMDA SYEDRQKFFH VIDLLSSAPS DVCAPGSITL
301: DIIQQAEAEV KRLDQLKASR IKELFIKKQK ELEDTCNMSH METPSTEMGN ITNLVDSGEV DHVDLLAAMD EKIARAKEEA ASRKGIIEKV DRWMLASDEE
401: RWLEEYDQDE NRYSVSRNAH RNLRRAERAR ITVSKISGLV ESILVKAKSW EVERQKVFLY NEVPLVAMLQ EYNKLRQEKE MEKQRLREMK KMSIPQPVAE
501: GDNFYMARPA SSNRRISNRS MNGGFGSGSP INRKYSGGFN NTNNNYTALG TSIRRESRKS EA
Arabidopsis Description
MAP65-865-kDa microtubule-associated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7G0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.