Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G263800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 84.87 | 96.77 |
| TraesCS4B01G051200.1 | Wheat | nucleus | 84.16 | 96.28 |
| TraesCS4D01G051300.1 | Wheat | cytosol | 79.35 | 94.92 |
| Os03t0719000-01 | Rice | cytosol, nucleus | 53.61 | 80.3 |
| EER90980 | Sorghum | cytosol | 70.44 | 78.67 |
| KRH09582 | Soybean | cytosol, mitochondrion, nucleus | 11.46 | 53.64 |
| GSMUA_Achr10P... | Banana | nucleus | 43.56 | 50.99 |
| KRH46955 | Soybean | cytosol | 20.23 | 50.53 |
| VIT_01s0011g06330.t01 | Wine grape | nucleus | 41.44 | 48.91 |
| KRH01846 | Soybean | extracellular | 23.76 | 48.55 |
| GSMUA_Achr6P05980_001 | Banana | cytosol | 40.03 | 47.56 |
| Zm00001d033794_P001 | Maize | nucleus | 67.89 | 47.52 |
| CDY17624 | Canola | nucleus | 40.74 | 47.37 |
| Bra024843.1-P | Field mustard | nucleus | 40.59 | 47.2 |
| KRH40910 | Soybean | cytosol, mitochondrion, nucleus | 39.89 | 46.92 |
| KRG89099 | Soybean | cytosol | 39.75 | 46.76 |
| CDY03090 | Canola | nucleus | 40.45 | 46.05 |
| Solyc01g005080.2.1 | Tomato | cytosol | 36.35 | 45.98 |
| AT2G01910.1 | Thale cress | nucleus | 39.32 | 45.72 |
| PGSC0003DMT400058659 | Potato | cytosol, plastid | 38.19 | 44.93 |
| Solyc04g008290.2.1 | Tomato | nucleus | 37.77 | 44.5 |
| PGSC0003DMT400075869 | Potato | nucleus | 37.62 | 44.41 |
| CDX81663 | Canola | cytosol | 37.34 | 44.15 |
| CDY33748 | Canola | cytosol | 37.2 | 44.05 |
| Bra026811.1-P | Field mustard | cytosol, nucleus, plastid | 36.92 | 43.87 |
| AT1G14690.1 | Thale cress | cytosol | 37.2 | 43.62 |
| CDY15798 | Canola | endoplasmic reticulum, golgi | 25.6 | 42.89 |
| HORVU4Hr1G064580.2 | Barley | endoplasmic reticulum, nucleus, plastid | 42.72 | 41.83 |
| HORVU7Hr1G094860.1 | Barley | cytosol | 33.52 | 40.86 |
| HORVU6Hr1G070900.6 | Barley | cytosol | 30.83 | 36.95 |
| HORVU7Hr1G045770.7 | Barley | endoplasmic reticulum | 30.98 | 35.78 |
| HORVU1Hr1G063330.5 | Barley | golgi | 30.98 | 34.54 |
| GSMUA_Achr2P21660_001 | Banana | endoplasmic reticulum, extracellular | 42.29 | 31.54 |
| HORVU7Hr1G054130.4 | Barley | mitochondrion | 28.71 | 30.53 |
| HORVU1Hr1G083810.7 | Barley | cytosol | 28.85 | 29.82 |
| HORVU3Hr1G063620.1 | Barley | plastid | 29.84 | 28.28 |
| Bra026625.1-P | Field mustard | mitochondrion | 14.14 | 26.04 |
| CDY09401 | Canola | endoplasmic reticulum, golgi, plasma membrane | 17.96 | 22.32 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G008440.3 | EnsemblPlantsGene:HORVU4Hr1G008440 | Gene3D:1.20.58.1520 | GO:GO:0000226 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:MAP65_Ase1_PRC1 |
| ncoils:Coil | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF14 | PFAM:PF03999 | SEG:seg | UniParc:UPI000B47EBA3 |
| UniProt:A0A287N456 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:22879004..22884099
Molecular Weight (calculated)
77547.7 Da
IEP (calculated)
8.086
GRAVY (calculated)
-0.394
Length
707 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSLHPTHPP IHPSTNDVSL PLAGDAKTLT QLSIELASWC ICIVVSSSPT ASTSATTAMG EVAAELLYSM APLALSGGGA EVGSCAPLLA ELRQLWGEIG
101: KSREERERMV QELEAECTRV YRRKVDEATG ERALLHQSLA ASEAEIAALT AALGAENSTH FKVNKWTVSL NERVSSATGL LEELRSMRAE RSKQFTDIRS
201: EIEKISAEIA GRSHGQDTSP RAGDGHDLTI RRLNEYKARL STLQKEKSDR LHKVLEHVTE VHSLCDVLGE DFIAIVNEVH PGLHEADPGK PTSISDTTLT
301: RLSQVVAMLT AEKAKRAAML REAVVPLVEL WDLMDSPVEE RRGFQKAAAV LRPAKEEVLS SGVLSMASIK KTEEEVERLT RLKAGRMKEL VLKRRLELEN
401: ICRSMHVEPD ASTVPEKSIA LIDSGLVNPS ELMASIDDQI AKAKEEHQSR KDIMEKINKW LLACEEEKWL DDHNVVCTNL TYNLNAYFGA LDSDLWVLIS
501: SAGFNQDENR FSTGRTARLN LKRAEKARVI IMKIPAIVDN LMSRTLAWES ERKKPFLYDG ARLVAVLEEH KQARLRQEEE RRRLREQKKL RTLFSEKEAM
601: PRLKRPSGSG GFSRTPEPSS MNRKRVDAGR LTCSAPSMRS GSSGSSCGGG GGGRSSGELD RPRSSAAGAG RCGELLHGAR RLSASSFNYV GVAKAGGSMS
701: SSLASLS
101: KSREERERMV QELEAECTRV YRRKVDEATG ERALLHQSLA ASEAEIAALT AALGAENSTH FKVNKWTVSL NERVSSATGL LEELRSMRAE RSKQFTDIRS
201: EIEKISAEIA GRSHGQDTSP RAGDGHDLTI RRLNEYKARL STLQKEKSDR LHKVLEHVTE VHSLCDVLGE DFIAIVNEVH PGLHEADPGK PTSISDTTLT
301: RLSQVVAMLT AEKAKRAAML REAVVPLVEL WDLMDSPVEE RRGFQKAAAV LRPAKEEVLS SGVLSMASIK KTEEEVERLT RLKAGRMKEL VLKRRLELEN
401: ICRSMHVEPD ASTVPEKSIA LIDSGLVNPS ELMASIDDQI AKAKEEHQSR KDIMEKINKW LLACEEEKWL DDHNVVCTNL TYNLNAYFGA LDSDLWVLIS
501: SAGFNQDENR FSTGRTARLN LKRAEKARVI IMKIPAIVDN LMSRTLAWES ERKKPFLYDG ARLVAVLEEH KQARLRQEEE RRRLREQKKL RTLFSEKEAM
601: PRLKRPSGSG GFSRTPEPSS MNRKRVDAGR LTCSAPSMRS GSSGSSCGGG GGGRSSGELD RPRSSAAGAG RCGELLHGAR RLSASSFNYV GVAKAGGSMS
701: SSLASLS
001: MLEIESPTSL CFRTNTTCNA LLRELQKIWV DIGESDAEKD RMLMELEKEC LEIYRRKVDE AANSKAQLHQ SLVSIEAEIA SLLAALGVFN SHSPMKAKEG
101: SKSLKEKLAA VRPMLEDLRL QKDERMKQFV DIKAQIEKMS GEISGYSDQL NKTMVGSLAL DEQDLTLRKL NEYQTHLRSL QKEKSDRLNK VLDYVNEVHT
201: LCGVLGVDFG QTVSEVHPSL HRTDHEQSTN ISDDTLDGLH HMIHKLKTER SVRFQKLKDV AGSLFELWNL MDTSQEERTK FASVSYVVRS SESDITEPNI
301: LSSETIEQVS AEVDCFNKLK ASRMKELVMK RRTELENLCR LAHIEADTST SLEKSTALID SGLVDPSELL TNIELHINKI KEEAHSRKEI IDRIDRWLSA
401: CEEENWLEEY NQDETRYSAG RGGHVNLKHA ERARITVNKI PSMVDNLIKK TLLWEDETRK SFLYDGVRLV SILEDYKLTR KQQEEEKRRY RDQKKMQDLL
501: IKRRESIYGS KPSPRRSNSV RKTNGYNGDA SVPPTPRRNS AGATNNDIMT TPRSYSSHRQ NGYFKEVRRL STAPLNFVAI PKEDSVSTYT SVCGSEPDSP
601: LYN
101: SKSLKEKLAA VRPMLEDLRL QKDERMKQFV DIKAQIEKMS GEISGYSDQL NKTMVGSLAL DEQDLTLRKL NEYQTHLRSL QKEKSDRLNK VLDYVNEVHT
201: LCGVLGVDFG QTVSEVHPSL HRTDHEQSTN ISDDTLDGLH HMIHKLKTER SVRFQKLKDV AGSLFELWNL MDTSQEERTK FASVSYVVRS SESDITEPNI
301: LSSETIEQVS AEVDCFNKLK ASRMKELVMK RRTELENLCR LAHIEADTST SLEKSTALID SGLVDPSELL TNIELHINKI KEEAHSRKEI IDRIDRWLSA
401: CEEENWLEEY NQDETRYSAG RGGHVNLKHA ERARITVNKI PSMVDNLIKK TLLWEDETRK SFLYDGVRLV SILEDYKLTR KQQEEEKRRY RDQKKMQDLL
501: IKRRESIYGS KPSPRRSNSV RKTNGYNGDA SVPPTPRRNS AGATNNDIMT TPRSYSSHRQ NGYFKEVRRL STAPLNFVAI PKEDSVSTYT SVCGSEPDSP
601: LYN
Arabidopsis Description
MAP65-765-kDa microtubule-associated protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L836]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.