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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G083810.7
HORVU2Hr1G062760.2
HORVU2Hr1G084050.1 nucleus
HORVU3Hr1G063620.1
HORVU4Hr1G067810.1 nucleus
HORVU5Hr1G045460.1 nucleus
HORVU7Hr1G029580.3 nucleus

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G51600.1 HORVU2Hr1G062760.2 AT2G22640.1 25262777
AT5G51600.1 HORVU4Hr1G067810.1 AT3G19590.1 25262777
AT5G51600.1 HORVU4Hr1G067810.1 AT3G19590.1 25262777
AT5G51600.1 HORVU2Hr1G084050.1 AT3G25980.1 25262777
AT5G51600.1 HORVU2Hr1G084050.1 AT3G25980.1 25262777
AT5G51600.1 HORVU5Hr1G045460.1 AT5G05510.1 25262777
AT5G51600.1 HORVU7Hr1G029580.3 AT5G05510.1 25262777
AT5G51600.1 HORVU5Hr1G045460.1 AT5G05510.1 25262777
AT5G51600.1 HORVU7Hr1G029580.3 AT5G05510.1 25262777
AT5G51600.1 HORVU1Hr1G083810.7 AT5G51600.1 25262777
AT5G51600.1 HORVU3Hr1G063620.1 AT5G51600.1 25262777
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G378900.1 Wheat cytosol 91.23 92.17
TraesCS1D01G386100.1 Wheat cytosol 91.37 91.78
TraesCS1B01G400200.1 Wheat cytosol 90.5 90.9
Os05t0552900-01 Rice cytosol 68.71 64.3
GSMUA_Achr5P11340_001 Banana cytosol 60.23 61.77
GSMUA_Achr1P02510_001 Banana cytosol 60.82 61.63
HORVU3Hr1G063620.1 Barley plastid 66.37 60.86
VIT_16s0022g01820.t01 Wine grape nucleus 56.29 52.74
VIT_15s0048g00860.t01 Wine grape cytosol, nucleus, plasma membrane 44.15 50.42
PGSC0003DMT400070431 Potato nucleus 51.02 50.29
Solyc03g007130.2.1 Tomato nucleus 54.09 49.93
KRG92454 Soybean nucleus 53.07 49.93
PGSC0003DMT400079660 Potato cytosol 53.95 49.53
KRH34346 Soybean cytosol 53.8 49.4
Bra023930.1-P Field mustard cytosol 50.73 48.94
KRH38719 Soybean cytosol 46.05 48.91
Bra028266.1-P Field mustard cytosol 50.44 48.8
AT5G51600.1 Thale cress cytosol 49.71 48.09
Solyc11g072280.1.1 Tomato extracellular 54.09 47.99
CDX87240 Canola nucleus 37.13 46.95
Bra035900.1-P Field mustard nucleus 36.84 46.58
CDX86911 Canola nucleus 36.7 46.57
CDY00270 Canola nucleus 36.7 46.57
CDY16786 Canola nucleus 36.84 46.41
Bra010069.1-P Field mustard nucleus 36.55 46.38
AT5G62250.1 Thale cress nucleus 36.7 45.72
HORVU7Hr1G094860.1 Barley cytosol 37.87 44.66
PGSC0003DMT400033224 Potato nucleus 46.64 42.25
Solyc01g091380.2.1 Tomato plastid 45.91 42.2
KRH40591 Soybean nucleus 41.08 40.09
AT3G60840.1 Thale cress cytosol 39.47 39.88
KRH09228 Soybean cytosol 30.99 39.63
CDX89081 Canola cytosol 39.47 39.36
Bra014467.1-P Field mustard cytosol 37.28 39.35
CDY62713 Canola cytosol 39.18 39.18
HORVU7Hr1G045770.7 Barley endoplasmic reticulum 34.8 38.89
HORVU6Hr1G070900.6 Barley cytosol 33.19 38.47
HORVU1Hr1G063330.5 Barley golgi 32.75 35.33
HORVU4Hr1G064580.2 Barley endoplasmic reticulum, nucleus, plastid 33.63 31.86
HORVU4Hr1G008440.3 Barley nucleus 29.82 28.85
HORVU7Hr1G054130.4 Barley mitochondrion 27.63 28.42
Protein Annotations
EnsemblPlants:HORVU1Hr1G083810.7EnsemblPlantsGene:HORVU1Hr1G083810Gene3D:1.20.58.1520GO:GO:0000226GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016043InterPro:MAP65_Ase1_PRC1
ncoils:CoilPANTHER:PTHR19321PANTHER:PTHR19321:SF8PFAM:PF03999SEG:segUniParc:UPI000B480BA5
UniProt:A0A287GJ40MapMan:13.4.3.5::::
Description
No Description!
Coordinates
chrchr1H:-:532620692..532625023
Molecular Weight (calculated)
77257.5 Da
IEP (calculated)
6.544
GRAVY (calculated)
-0.564
Length
684 amino acids
Sequence
(BLAST)
001: MSGGRRPGDQ LLQMGTACGA LMHELQVIWD EIGEKDAARD TMLLELQQEC LEAYRRKVDQ ASRCRAELRR DIADAQAELA AVCSAMAESP VLVREKGYGL
101: REELSAIFPY LEEMKNRKAE RWNQILDVIG KIKKISSEIR PADFVPFKAP VDQSDLSCRR LEELRTELRS LEKEKSERLK QVMDYLNTLH SLCKVLGVNF
201: KQTISDVHPS LDEDGVPMNI SNTTIERLAL AIQRLRETKI ERMQKLQDLS STMLELWNLM DTPIEEQQSF QNITCNIAAS EPEITEADAL TIDVMNFVEA
301: EVLRLEQLKV SKMKDLVLKK QTELEEHRRR AHLVGDEHYA TQFNIEAIEA GAIDPSLLLE QIEAYIATVK EDAFSRKDIL ERVERWLNAC EEEAWLEDYS
401: KDDNRYNAGR GAHFMLKRAE KARVLVNKIP GIVDLLTNKV IDWEKERGTE FTYDGVSLLS MLDDYRIVRE EKEQEKKRQR DQKKLEDRFK AEQETLYGSK
501: PSPAKLNSGN KLTRNSSGIA NRRLSVGGGP VRTPKLVTPQ SRFIRSAKKT EDSGTLSPGK RGKGTANPRC KQLSFKASTL GETETLRKPF TQIAPGNSIP
601: STPVRSASNS TEGENRTPKI LAAPTPKTPM MVISPMQMST TPALTAARAA PICVSNDKPE LCLLEGTEYS FEERRLAYLA AHAA
Best Arabidopsis Sequence Match ( AT5G51600.1 )
(BLAST)
001: MASVQKDPIL QVETTCGSLL FELQIIWDEV GETETDRDQM LLELERECLE VYRRKVDQAN RCRAQLRQAI ADAEAQLAAI CSAMGERPVH IRQSDQSVGS
101: LKQELGRILP ELEEMQKRKV ERRNQFIVVM EQIDSITNDI KGQGELVHSE PLIDETNLSM RKLEELHCQL QVLQKEKIDR VETIRKHLCT LYSHCSVLGM
201: DFNEVVGQVN PTLSDPEGPR SLSDHTIEKL GAAVQKLMEV KIQRMQRLQD LATTMLELWN LMDTPIEEQQ EYQHITCNIA ASEHEITEAN SLSEDFIKYV
301: EAEVVRLDEV KASKMKELVL KKRSELEEIC RKTHLLPVSD SAIDQTIVAI ESGIVDATMV LEHLEQHISK IKEEALSRKE ILERVEKWLS ACDEESWLEE
401: YNRDDNRYNA GRGAHLTLKR AEKARNLVTK LPGMVEALAS KTIVWEQENG IEFLYDGIRL LSMLEEYNIL RQEREEEHRR QRDQKKLQGQ LIAEQEALYG
501: SKPSPSKPLG GKKAPRMSTG GASNRRLSLG AAMHQTPKPN KKADHRHNDG ALSNGRRGLD IAGLPSRKQS MNPSEMLQSP LVRKPFSPIS TTVVASKANI
601: ATTTTQQLPK NNAVNEISSF ATPIKNNNIL RNLEEEKMMT MMMQTPKNVA AMIPIPSTPA TVSVPMHTAP TPFTNNARLM SEKPEVVEYS FEERRLAFML
701: QSECRLV
Arabidopsis Description
MAP65-365-kDa microtubule-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.