Factsheet for HORVU4Hr1G067810.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G052030.2
HORVU1Hr1G052730.26
HORVU1Hr1G055970.27
HORVU1Hr1G065390.1
HORVU1Hr1G065440.3
HORVU1Hr1G071210.4
HORVU1Hr1G083810.7
HORVU1Hr1G090300.44
HORVU2Hr1G028060.7
HORVU2Hr1G062760.2
HORVU2Hr1G084050.1
HORVU2Hr1G093680.3
HORVU2Hr1G098320.1
HORVU2Hr1G098340.4
HORVU3Hr1G063620.1
HORVU4Hr1G000670.1
HORVU4Hr1G018990.9
HORVU4Hr1G067810.1
HORVU5Hr1G045460.1
HORVU6Hr1G025270.1
HORVU6Hr1G032550.1
HORVU7Hr1G029580.3
HORVU7Hr1G044070.2
HORVU7Hr1G045920.2
HORVU7Hr1G080310.1
HORVU7Hr1G114720.1
HORVU7Hr1G114740.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19590.1	HORVU7Hr1G114720.1	AT1G07660.1	20706207
AT3G19590.1	HORVU7Hr1G114740.1	AT1G07660.1	20706207
AT3G19590.1	HORVU1Hr1G052030.2	AT1G07820.1	20706207
AT3G19590.1	HORVU1Hr1G090300.44	AT1G07820.1	20706207
AT3G19590.1	HORVU4Hr1G000670.1	AT1G67210.1	20706207
AT3G19590.1	HORVU2Hr1G028060.7	AT2G06990.1	20706207
AT3G19590.1	HORVU4Hr1G018990.9	AT2G06990.1	20706207
AT3G19590.1	HORVU2Hr1G062760.2	AT2G22640.1	25262777
AT3G19590.1	HORVU6Hr1G025270.1	AT3G11830.1	20706207
AT3G19590.1	HORVU4Hr1G067810.1	AT3G19590.1	25262777
AT3G19590.1	HORVU1Hr1G052730.26	AT3G20050.1	20706207
AT3G19590.1	HORVU7Hr1G044070.2	AT3G20050.1	20706207
AT3G19590.1	HORVU2Hr1G084050.1	AT3G25980.1	25262777
AT3G19590.1	HORVU1Hr1G071210.4	AT3G46320.1	20706207
AT3G19590.1	HORVU2Hr1G098320.1	AT3G46320.1	20706207
AT3G19590.1	HORVU2Hr1G098340.4	AT3G46320.1	20706207
AT3G19590.1	HORVU2Hr1G093680.3	AT3G53730.1	20706207
AT3G19590.1	HORVU1Hr1G055970.27	AT4G10110.1	20706207
AT3G19590.1	HORVU1Hr1G065390.1	AT4G10110.1	20706207
AT3G19590.1	HORVU1Hr1G065440.3	AT4G10110.1	20706207
AT3G19590.1	HORVU7Hr1G045920.2	AT4G10110.1	20706207
AT3G19590.1	HORVU5Hr1G045460.1	AT5G05510.1	25262777
AT3G19590.1	HORVU7Hr1G029580.3	AT5G05510.1	25262777
AT3G19590.1	HORVU6Hr1G032550.1	AT5G15980.1	20706207
AT3G19590.1	HORVU7Hr1G080310.1	AT5G26360.1	20706207
AT3G19590.1	HORVU1Hr1G083810.7	AT5G51600.1	20706207
AT3G19590.1	HORVU3Hr1G063620.1	AT5G51600.1	20706207
AT3G19590.1	HORVU1Hr1G071210.4	AT5G59970.1	20706207
AT3G19590.1	HORVU2Hr1G098320.1	AT5G59970.1	20706207
AT3G19590.1	HORVU2Hr1G098340.4	AT5G59970.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G058600.1	Wheat	cytosol, plastid	85.25	98.84
TraesCS4D01G245500.2	Wheat	cytosol, plastid	85.0	98.55
TraesCS4B01G246100.1	Wheat	cytosol	70.75	92.18
Os03t0448600-01	Rice	cytosol	78.5	91.55
EER87819	Sorghum	cytosol	77.75	90.67
Solyc01g107160.2.1	Tomato	nucleus	70.5	82.94
VIT_03s0091g00710.t01	Wine grape	cytosol	69.75	82.79
PGSC0003DMT400066160	Potato	extracellular	70.25	82.65
KRH35682	Soybean	nucleus	69.5	81.76
CDX95434	Canola	cytosol, plastid	69.25	81.47
CDY42193	Canola	cytosol, plastid	69.25	81.47
Bra038220.1-P	Field mustard	cytosol, plastid	69.25	81.47
KRG91104	Soybean	nucleus	69.5	80.81
KRG91092	Soybean	nucleus	68.5	80.59
CDY59371	Canola	cytosol, plastid	68.0	80.24
AT1G49910.1	Thale cress	cytosol	68.0	80.24
Bra014226.1-P	Field mustard	cytosol, plastid	67.75	79.94
AT3G19590.1	Thale cress	cytosol	67.75	79.71
CDY03579	Canola	cytosol, plastid	67.75	79.71
KRH35672	Soybean	cytosol	20.5	62.6
GSMUA_Achr4P03390_001	Banana	extracellular	36.75	34.75
HORVU5Hr1G096830.5	Barley	mitochondrion	25.0	31.06
HORVU3Hr1G056400.2	Barley	cytosol, plastid	29.75	29.82
HORVU1Hr1G004960.1	Barley	plastid	29.75	29.1

Protein Annotations

MapMan:13.3.5.5.2	Gene3D:2.130.10.10	UniProt:A0A287PGR3	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:HORVU4Hr1G067810	EnsemblPlants:HORVU4Hr1G067810.1	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR10971	PANTHER:PTHR10971:SF24
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000B46DEB2	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:563078669..563087942

Molecular Weight (calculated)

43876.6 Da

IEP (calculated)

9.216

GRAVY (calculated)

-0.447

Length

400 amino acids

Sequence
(BLAST)

001: RNGIFFSVLF PPAASVPRSP PPSRSPRSAR SGFKFRIPPP CTKYLTRFLS PLPPTMSDAP GAPASAMGSG RELANPPSDG ISNLRFSNHS DHLLVSSWDK
101: TVRLYDAEAN VLKGEFAHPG PVLDCCFHDD SSGFSAGADH TVRRLAFTSS KEDVLGRHDA PVRCVEYSYA AGQVITGSWD KTIKCWDPRG VSGPERTLVG
201: TYAQPERVYS MSLVGNRLVV ATAGRHVSIY DLRNMSQPEQ KRESSLKYQT RCVRCFPNGT GYALSSVEGR VSMEFFDLSE SAQSKKYAFK CHRKSESGRD
301: TVYPVNAIAF HPIYGTFATG GHDGFVNVWD GTNKKRLYQY SKYASSIASL SFSKDGHLLA VASSYGYEEG EKPHEPDAIF IRGVNEVEVK PKPKALAAPQ

Best Arabidopsis Sequence Match ( AT3G19590.1 )
(BLAST)

001: MTTVTPSAGR ELSNPPSDGI SNLRFSNNSD HLLVSSWDKR VRLYDVSTNS LKGEFLHGGA VLDCCFHDDF SGFSVGADYK VRRIVFNVGK EDILGTHDKA
101: VRCVEYSYAA GQVITGSWDK TVKCWDPRGA SGPERTQVGT YLQPERVYSM SLVGHRLVVA TAGRHVNIYD LRNMSQPEQR RESSLKYQTR CVRCYPNGTG
201: YALSSVEGRV AMEFFDLSEA AQAKKYAFKC HRKSEAGRDI VYPVNSIAFH PIYGTFATGG CDGFVNIWDG NNKKRLYQYS KYPTSISALS FSRDGQLLAV
301: ASSYTFEEGE KSQEPEAIFV RSVNEIEVKP KPKVYPNPAA

Arabidopsis Description

BUB3.1BUB3.1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.