Factsheet for Bra014226.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
nucleus 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59371	Canola	cytosol, plastid	99.41	99.41
AT1G49910.1	Thale cress	cytosol	92.92	92.92
Bra038220.1-P	Field mustard	cytosol, plastid	86.43	86.18
VIT_03s0091g00710.t01	Wine grape	cytosol	82.6	83.09
Solyc01g107160.2.1	Tomato	nucleus	82.3	82.06
PGSC0003DMT400066160	Potato	extracellular	82.01	81.76
Os03t0448600-01	Rice	cytosol	80.53	79.59
EER87819	Sorghum	cytosol	79.94	79.01
TraesCS4A01G058600.1	Wheat	cytosol, plastid	80.24	78.84
TraesCS4D01G245500.2	Wheat	cytosol, plastid	80.24	78.84
TraesCS4B01G246100.1	Wheat	cytosol	65.78	72.64
KRH35672	Soybean	cytosol	27.43	70.99
HORVU4Hr1G067810.1	Barley	plastid	79.94	67.75
TraesCS2D01G193800.1	Wheat	cytosol	63.13	62.57
TraesCS2A01G194000.1	Wheat	cytosol	63.72	62.43
Os07t0588500-00	Rice	cytosol	66.96	62.36
TraesCS2B01G212800.1	Wheat	cytosol	63.42	61.96
Bra003577.1-P	Field mustard	cytosol	29.5	36.23
GSMUA_Achr4P03390_001	Banana	extracellular	44.84	35.93
Bra035162.1-P	Field mustard	plastid	34.51	33.62
Bra008447.1-P	Field mustard	plastid	33.63	32.95
Bra038307.1-P	Field mustard	plastid	32.15	28.84

Protein Annotations

MapMan:13.3.5.5.2	Gene3D:2.130.10.10	EnsemblPlantsGene:Bra014226	EnsemblPlants:Bra014226.1	EnsemblPlants:Bra014226.1-P	InterPro:G-protein_beta_WD-40_rep
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
UniProt:M4DCL0	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR10971
PANTHER:PTHR10971:SF24	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0002546183	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:

Description

AT1G49910 (E=9e-183) | WD-40 repeat family protein / mitotic checkpoint protein, putative

Coordinates

chrA08:-:2370129..2372393

Molecular Weight (calculated)

37703.1 Da

IEP (calculated)

7.519

GRAVY (calculated)

-0.544

Length

339 amino acids

Sequence
(BLAST)

001: MTLVPSIGRE LSNPPSDGVS NLRFSNSSDH LLVSSWDKSV RLYDANADSM RGEFKHGGAV LDCCFHDDSS GFSASADHKV RRIDFNAGKE DILGMHDEPV
101: RCVEYSYAAG QVITGSWDRT IKCWDPRAAS GPERSQIGTY KQPERVNSLS LVGNHLVVAT AGRHVNIYDL RNMSQPEQRR ESSLKYQTRC VRCYPNGTGY
201: ALSSVEGRVS MEFFDLSEAA QAKKYAFKCH RKSEDGRDIV YPVNAIAFHP IYGTFATGGC DGFVNVWDGN NKKRLYQYSK YPTSIAALSF SRDGGLLAIA
301: SSYTFEEGDK PHEPDTIFVR NVNEIEVKPK PKVYPNPPA

Best Arabidopsis Sequence Match ( AT1G49910.1 )
(BLAST)

001: MTLVPAIGRE LSNPPSDGIS NLRFSNNSDH LLVSSWDKSV RLYDANGDLM RGEFKHGGAV LDCCFHDDSS GFSVCADTKV RRIDFNAGKE DVLGTHEKPV
101: RCVEYSYAAG QVITGSWDKT IKCWDPRGAS GTERTQIGTY MQPERVNSLS LVGNRLVVAT AGRHVNIYDL RNMSQPEQRR ESSLKYQTRC VRCYPNGTGY
201: ALSSVEGRVS MEFFDLSEAA QAKKYAFKCH RKSEDGRDIV YPVNAIAFHP IYGTFASGGC DGFVNIWDGN NKKRLYQYSK YPTSIAALSF SRDGGLLAVA
301: SSYTFEEGDK PHEPDAIFVR SVNEIEVKPK PKVYPNPPV

Arabidopsis Description

BUB3.2BUB3.2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7L6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.