CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
nucleus 2
mitochondrion 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER87819
EER92655
EES00250
EES02351
EES04545
EES04708
EES05262
EES05938
EES06214
EES07816
EES09179
EES12410
EES12723
EES16550
EES18362
KXG22055
OQU87349
OQU87973

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19590.1	EES18362	AT1G07820.1	20706207
AT3G19590.1	EES05262	AT1G67210.1	20706207
AT3G19590.1	EES02351	AT2G06990.1	20706207
AT3G19590.1	EES07816	AT2G22640.1	25262777
AT3G19590.1	EES04545	AT3G11830.1	20706207
AT3G19590.1	EER87819	AT3G19590.1	25262777
AT3G19590.1	EES05938	AT3G20050.1	20706207
AT3G19590.1	EES12410	AT3G25980.1	25262777
AT3G19590.1	EES00250	AT3G46320.1	20706207
AT3G19590.1	EES12723	AT3G53730.1	20706207
AT3G19590.1	KXG22055	AT4G10110.1	20706207
AT3G19590.1	OQU87973	AT4G10110.1	20706207
AT3G19590.1	EES09179	AT5G05510.1	25262777
AT3G19590.1	EES16550	AT5G05510.1	25262777
AT3G19590.1	EES04708	AT5G15980.1	20706207
AT3G19590.1	EER92655	AT5G26360.1	20706207
AT3G19590.1	EES06214	AT5G51600.1	20706207
AT3G19590.1	OQU87349	AT5G51600.1	20706207
AT3G19590.1	EES00250	AT5G59970.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0448600-01	Rice	cytosol	94.75	94.75
TraesCS4A01G058600.1	Wheat	cytosol, plastid	90.96	90.43
TraesCS4D01G245500.2	Wheat	cytosol, plastid	90.67	90.14
TraesCS4B01G246100.1	Wheat	cytosol	75.51	84.36
VIT_03s0091g00710.t01	Wine grape	cytosol	82.22	83.68
Solyc01g107160.2.1	Tomato	nucleus	82.51	83.24
Bra038220.1-P	Field mustard	cytosol, plastid	82.22	82.94
CDX95434	Canola	cytosol, plastid	82.22	82.94
CDY42193	Canola	cytosol, plastid	82.22	82.94
PGSC0003DMT400066160	Potato	extracellular	82.22	82.94
KRH35682	Soybean	nucleus	81.92	82.65
KRG91092	Soybean	nucleus	81.05	81.76
KRG91104	Soybean	nucleus	81.92	81.69
AT3G19590.1	Thale cress	cytosol	79.88	80.59
CDY59371	Canola	cytosol, plastid	79.59	80.53
AT1G49910.1	Thale cress	cytosol	79.3	80.24
Bra014226.1-P	Field mustard	cytosol, plastid	79.01	79.94
CDY03579	Canola	cytosol, plastid	79.01	79.71
HORVU4Hr1G067810.1	Barley	plastid	90.67	77.75
KRH35672	Soybean	cytosol	24.78	64.89
OQU90950	Sorghum	mitochondrion	34.99	37.15
GSMUA_Achr4P03390_001	Banana	extracellular	44.31	35.93
EES01141	Sorghum	plastid	33.53	33.43
KXG24577	Sorghum	cytosol, plastid	32.65	31.2

Protein Annotations

MapMan:13.3.5.5.2	Gene3D:2.130.10.10	EntrezGene:8070716	UniProt:C5Z3U4	EnsemblPlants:EER87819	ProteinID:EER87819
ProteinID:EER87819.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0000776	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0007049
GO:GO:0007094	GO:GO:0008150	GO:GO:0009524	GO:GO:0009987	GO:GO:0016043	GO:GO:0033597
GO:GO:0043130	GO:GO:1990298	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400
PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR10971	PANTHER:PTHR10971:SF24	SMART:SM00320
EnsemblPlantsGene:SORBI_3010G032400	SUPFAM:SSF50978	UniParc:UPI0001A88F17	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	RefSeq:XP_002436452.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:2588893..2594749

Molecular Weight (calculated)

37532.0 Da

IEP (calculated)

8.199

GRAVY (calculated)

-0.381

Length

343 amino acids

Sequence
(BLAST)

001: MSSAAAPAAV GSGKELANPP ADGISNLRFS NHSNNLLVSS WDKTVRLYDA DANVLKGEFV HPGAVLDCCF HDDSSGFSAG ADHTVRRLVF SSNKEDVLGR
101: HDGPVRCVEY SYAAGQVITG SWDKTVKCWD PRGVSGPERT LVGTYAQPER VYSLSLVGNR LVVATAGRHV NIYDLRNMSQ PEQKRDSSLK YQTRCVRCFP
201: NGTGYALSSV EGRVSMEFFD LSESAQSKKY AFKCHRKSEA GRDTVYPVNA IAFHPIYGTF ATGGCDGFVN VWDGINKKRL YQYSKYASSI AALSFSKDGH
301: LLAVASSYTY EEGEKTHEPD AIFIRTVNEV EVKPKPKALA APQ

Best Arabidopsis Sequence Match ( AT3G19590.1 )
(BLAST)

001: MTTVTPSAGR ELSNPPSDGI SNLRFSNNSD HLLVSSWDKR VRLYDVSTNS LKGEFLHGGA VLDCCFHDDF SGFSVGADYK VRRIVFNVGK EDILGTHDKA
101: VRCVEYSYAA GQVITGSWDK TVKCWDPRGA SGPERTQVGT YLQPERVYSM SLVGHRLVVA TAGRHVNIYD LRNMSQPEQR RESSLKYQTR CVRCYPNGTG
201: YALSSVEGRV AMEFFDLSEA AQAKKYAFKC HRKSEAGRDI VYPVNSIAFH PIYGTFATGG CDGFVNIWDG NNKKRLYQYS KYPTSISALS FSRDGQLLAV
301: ASSYTFEEGE KSQEPEAIFV RSVNEIEVKP KPKVYPNPAA

Arabidopsis Description

BUB3.1BUB3.1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.