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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014226.1-P Field mustard cytosol, plastid 92.92 92.92
CDY59371 Canola cytosol, plastid 92.92 92.92
CDY03579 Canola cytosol, plastid 92.63 92.35
AT3G19590.1 Thale cress cytosol 87.91 87.65
VIT_03s0091g00710.t01 Wine grape cytosol 83.48 83.98
Solyc01g107160.2.1 Tomato nucleus 82.3 82.06
PGSC0003DMT400066160 Potato extracellular 82.01 81.76
Os03t0448600-01 Rice cytosol 80.83 79.88
TraesCS4A01G058600.1 Wheat cytosol, plastid 80.83 79.42
TraesCS4D01G245500.2 Wheat cytosol, plastid 80.83 79.42
EER87819 Sorghum cytosol 80.24 79.3
TraesCS4B01G246100.1 Wheat cytosol 66.08 72.96
KRH35672 Soybean cytosol 26.84 69.47
HORVU4Hr1G067810.1 Barley plastid 80.24 68.0
Os07t0588500-00 Rice cytosol 66.96 62.36
TraesCS2D01G193800.1 Wheat cytosol 61.65 61.11
TraesCS2A01G194000.1 Wheat cytosol 62.24 60.98
TraesCS2B01G212800.1 Wheat cytosol 61.95 60.52
GSMUA_Achr4P03390_001 Banana extracellular 44.84 35.93
AT1G69400.1 Thale cress cytosol 32.45 35.03
AT1G80670.1 Thale cress cytosol, plastid 33.63 32.66
AT1G15850.1 Thale cress plastid 9.73 23.57
Protein Annotations
MapMan:13.3.5.5.2Gene3D:2.130.10.10EntrezGene:841414UniProt:A0A178W7L6ProteinID:AAG51772.1ProteinID:AAG60165.1
ProteinID:AEE32490.1ArrayExpress:AT1G49910EnsemblPlantsGene:AT1G49910RefSeq:AT1G49910TAIR:AT1G49910RefSeq:AT1G49910-TAIR-G
EnsemblPlants:AT1G49910.1TAIR:AT1G49910.1Symbol:BUB3.2InterPro:G-protein_beta_WD-40_repGO:GO:0000003GO:GO:0000775
GO:GO:0000776GO:GO:0000777GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005694GO:GO:0005737GO:GO:0005819
GO:GO:0005856GO:GO:0007049GO:GO:0007059GO:GO:0007094GO:GO:0008150GO:GO:0009524
GO:GO:0009987GO:GO:0016043GO:GO:0033597GO:GO:0043130GO:GO:0051301GO:GO:0051321
GO:GO:1990298InterPro:IPR001680InterPro:IPR015943InterPro:IPR017986RefSeq:NP_175413.1ProteinID:OAP13363.1
PFAM:PF00400PO:PO:0000037PO:PO:0000084PO:PO:0000293PO:PO:0001017PO:PO:0001078
PO:PO:0001081PO:PO:0004507PO:PO:0007611PO:PO:0009005PO:PO:0009009PO:PO:0009010
PO:PO:0009046PO:PO:0020030PO:PO:0025022PO:PO:0025195PO:PO:0025281PRINTS:PR00320
PFscan:PS50082PFscan:PS50294PANTHER:PTHR10971PANTHER:PTHR10971:SF24UniProt:Q9C701SMART:SM00320
SUPFAM:SSF50978UniParc:UPI000009F297InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeatInterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sf
SEG:seg:::::
Description
BUB3.2BUB3.2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7L6]
Coordinates
chr1:+:18478951..18481539
Molecular Weight (calculated)
37672.3 Da
IEP (calculated)
7.945
GRAVY (calculated)
-0.488
Length
339 amino acids
Sequence
(BLAST)
001: MTLVPAIGRE LSNPPSDGIS NLRFSNNSDH LLVSSWDKSV RLYDANGDLM RGEFKHGGAV LDCCFHDDSS GFSVCADTKV RRIDFNAGKE DVLGTHEKPV
101: RCVEYSYAAG QVITGSWDKT IKCWDPRGAS GTERTQIGTY MQPERVNSLS LVGNRLVVAT AGRHVNIYDL RNMSQPEQRR ESSLKYQTRC VRCYPNGTGY
201: ALSSVEGRVS MEFFDLSEAA QAKKYAFKCH RKSEDGRDIV YPVNAIAFHP IYGTFASGGC DGFVNIWDGN NKKRLYQYSK YPTSIAALSF SRDGGLLAVA
301: SSYTFEEGDK PHEPDAIFVR SVNEIEVKPK PKVYPNPPV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.