Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G80670.1 | Thale cress | cytosol, plastid | 75.71 | 30.37 |
| KRH71020 | Soybean | cytosol, plastid | 72.14 | 29.11 |
| VIT_12s0055g00900.t01 | Wine grape | cytosol, plastid | 72.14 | 28.86 |
| KRH75181 | Soybean | nucleus | 71.43 | 28.82 |
| VIT_09s0002g09150.t01 | Wine grape | cytosol, plastid | 69.29 | 28.12 |
| Os08t0176800-01 | Rice | plastid | 68.57 | 28.07 |
| TraesCS1D01G034200.1 | Wheat | plastid | 67.14 | 27.41 |
| TraesCS1B01G041300.1 | Wheat | plastid | 66.43 | 27.11 |
| TraesCS1A01G033000.1 | Wheat | plastid | 66.43 | 27.11 |
| KXG24577 | Sorghum | cytosol, plastid | 67.86 | 26.46 |
| Os01t0635400-01 | Rice | cytosol, plastid | 63.57 | 25.87 |
| EES01141 | Sorghum | plastid | 62.86 | 25.58 |
| Zm00001d044116_P001 | Maize | cytosol, plastid | 62.86 | 25.51 |
| Solyc10g047000.1.1 | Tomato | nucleus | 62.86 | 25.14 |
| GSMUA_Achr6P30360_001 | Banana | cytosol, plastid | 66.43 | 25.14 |
| GSMUA_Achr6P30400_001 | Banana | cytosol, plastid | 65.71 | 24.86 |
| TraesCS3A01G226200.1 | Wheat | plastid | 60.71 | 24.64 |
| TraesCS3B01G258300.1 | Wheat | plastid | 60.0 | 24.35 |
| TraesCS3D01G224200.1 | Wheat | plastid | 60.0 | 24.35 |
| HORVU1Hr1G004960.1 | Barley | plastid | 67.14 | 22.98 |
| HORVU3Hr1G056400.2 | Barley | cytosol, plastid | 59.29 | 20.8 |
| AT3G19590.1 | Thale cress | cytosol | 25.0 | 10.29 |
| AT1G49910.1 | Thale cress | cytosol | 23.57 | 9.73 |
| AT1G69400.1 | Thale cress | cytosol | 19.29 | 8.6 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | EntrezGene:838155 | ProteinID:AAF82154.1 | ProteinID:AEE29373.1 | ArrayExpress:AT1G15850 |
| EnsemblPlantsGene:AT1G15850 | RefSeq:AT1G15850 | TAIR:AT1G15850 | RefSeq:AT1G15850-TAIR-G | EnsemblPlants:AT1G15850.1 | TAIR:AT1G15850.1 |
| Unigene:At.51625 | GO:GO:0000972 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 |
| GO:GO:0005643 | GO:GO:0006405 | GO:GO:0006606 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0043130 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | RefSeq:NP_173037.1 |
| PFAM:PF00400 | PO:PO:0007611 | PO:PO:0009046 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR10971 |
| PANTHER:PTHR10971:SF16 | UniProt:Q9LMQ0 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI00000AA097 | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | : | : | : |
Description
F7H2.18 protein [Source:UniProtKB/TrEMBL;Acc:Q9LMQ0]
Coordinates
chr1:-:5453245..5454088
Molecular Weight (calculated)
15056.6 Da
IEP (calculated)
4.735
GRAVY (calculated)
-0.329
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTSGDKATS STNNPNNSYE ITPPATDSIS SLSFSPKADI LVATSWDCQV RCWEITRSDG SIASEPKVSM SHDQPVLCSA WKDDGTTVFT GGCDKQAKMW
101: PLLSGAQPST VAMHDAPFNQ IAWIPGMNLL VTGSWDKTLK
101: PLLSGAQPST VAMHDAPFNQ IAWIPGMNLL VTGSWDKTLK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.