Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- cytosol 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008447.1-P | Field mustard | plastid | 92.55 | 93.35 |
| CDY53220 | Canola | plastid | 92.55 | 93.35 |
| CDY66129 | Canola | plastid | 92.55 | 93.35 |
| Bra035162.1-P | Field mustard | plastid | 91.69 | 91.95 |
| CDX87331 | Canola | plastid | 91.69 | 91.95 |
| CDY39955 | Canola | plastid | 91.69 | 91.95 |
| CDX67958 | Canola | cytosol, plastid | 89.97 | 90.75 |
| Bra003577.1-P | Field mustard | cytosol | 71.06 | 89.86 |
| CDX79362 | Canola | cytosol, plastid | 84.81 | 88.1 |
| KRH71020 | Soybean | cytosol, plastid | 83.09 | 83.57 |
| VIT_12s0055g00900.t01 | Wine grape | cytosol, plastid | 83.67 | 83.43 |
| KRH75181 | Soybean | nucleus | 82.52 | 83.0 |
| VIT_09s0002g09150.t01 | Wine grape | cytosol, plastid | 81.66 | 82.61 |
| Os08t0176800-01 | Rice | plastid | 78.8 | 80.41 |
| TraesCS1D01G034200.1 | Wheat | plastid | 77.65 | 79.01 |
| TraesCS1B01G041300.1 | Wheat | plastid | 77.36 | 78.72 |
| TraesCS1A01G033000.1 | Wheat | plastid | 77.36 | 78.72 |
| Solyc10g047000.1.1 | Tomato | nucleus | 77.36 | 77.14 |
| EES01141 | Sorghum | plastid | 74.79 | 75.87 |
| AT1G15850.1 | Thale cress | plastid | 30.37 | 75.71 |
| Os01t0635400-01 | Rice | cytosol, plastid | 74.21 | 75.29 |
| TraesCS3B01G258300.1 | Wheat | plastid | 73.35 | 74.2 |
| Zm00001d044116_P001 | Maize | cytosol, plastid | 73.35 | 74.2 |
| GSMUA_Achr6P30400_001 | Banana | cytosol, plastid | 78.51 | 74.05 |
| TraesCS3A01G226200.1 | Wheat | plastid | 73.07 | 73.91 |
| KXG24577 | Sorghum | cytosol, plastid | 75.93 | 73.82 |
| GSMUA_Achr6P30360_001 | Banana | cytosol, plastid | 78.22 | 73.78 |
| TraesCS3D01G224200.1 | Wheat | plastid | 72.78 | 73.62 |
| HORVU1Hr1G004960.1 | Barley | plastid | 79.37 | 67.73 |
| HORVU3Hr1G056400.2 | Barley | cytosol, plastid | 72.21 | 63.16 |
| AT3G19590.1 | Thale cress | cytosol | 33.52 | 34.41 |
| AT1G49910.1 | Thale cress | cytosol | 32.66 | 33.63 |
| AT1G69400.1 | Thale cress | cytosol | 21.78 | 24.2 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:23.5.1.1.1.10 | EntrezGene:844406 | UniProt:A0A178WNI0 | ProteinID:AAA98915.1 | ProteinID:AAF14654.1 |
| ProteinID:AAF14655.1 | ProteinID:AEE36435.1 | ArrayExpress:AT1G80670 | EnsemblPlantsGene:AT1G80670 | RefSeq:AT1G80670 | TAIR:AT1G80670 |
| RefSeq:AT1G80670-TAIR-G | EnsemblPlants:AT1G80670.1 | TAIR:AT1G80670.1 | EMBL:AY087683 | EMBL:BT025241 | InterPro:G-protein_beta_WD-40_rep |
| GO:GO:0000972 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005643 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006405 | GO:GO:0006606 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016043 | GO:GO:0043130 | GO:GO:0051028 | GO:GO:0080008 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | RefSeq:NP_178182.1 | ProteinID:OAP19471.1 | PFAM:PF00400 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00320 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR10971 | PANTHER:PTHR10971:SF16 | UniProt:Q38942 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI00000A2457 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | : | : |
Description
RAE1Protein RAE1 [Source:UniProtKB/Swiss-Prot;Acc:Q38942]
Coordinates
chr1:-:30320525..30323902
Molecular Weight (calculated)
38269.9 Da
IEP (calculated)
8.481
GRAVY (calculated)
-0.459
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MATFGAPATA NSNPNKSYEV TPSPADSISS LSFSPRADIL VATSWDNQVR CWEISRSGAS LASAPKASIS HDQPVLCSAW KDDGTTVFSG GCDKQAKMWP
101: LLSGGQPVTV AMHEGPIAAM AWIPGMNLLA TGSWDKTLKY WDTRQQNPVH TQQLPDKCYT LSVKHPLMVV GTADRNLIVF NLQNPQTEFK RIQSPLKYQT
201: RCVTAFPDQQ GFLVGSIEGR VGVHHLDDSQ QSKNFTFKCH RDGNDIYSVN SLNFHPVHGT FATAGSDGAF NFWDKDSKQR LKAMSRCNQP IPCSSFNHDG
301: SIYAYAACYD WSKGAENHNP ATAKSSIFLH LPQESEVKAK PRVGATGRK
101: LLSGGQPVTV AMHEGPIAAM AWIPGMNLLA TGSWDKTLKY WDTRQQNPVH TQQLPDKCYT LSVKHPLMVV GTADRNLIVF NLQNPQTEFK RIQSPLKYQT
201: RCVTAFPDQQ GFLVGSIEGR VGVHHLDDSQ QSKNFTFKCH RDGNDIYSVN SLNFHPVHGT FATAGSDGAF NFWDKDSKQR LKAMSRCNQP IPCSSFNHDG
301: SIYAYAACYD WSKGAENHNP ATAKSSIFLH LPQESEVKAK PRVGATGRK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.