Factsheet for Os07t0588500-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0876500-01
Os02t0126300-01
Os02t0247200-01
Os02t0829900-01
Os03t0448600-01
Os04t0486500-01
Os04t0551800-01
Os05t0427300-03
Os05t0552900-01
Os06t0495700-00
Os06t0538000-01
Os06t0687700-01
Os07t0588500-00
Os09t0553100-00
Os10t0539500-01
Os11t0128700-00
Os11t0176200-01
Os12t0125300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19590.1	Os10t0539500-01	AT1G07660.1	20706207
AT3G19590.1	Os06t0495700-00	AT1G67210.1	20706207
AT3G19590.1	Os11t0176200-01	AT2G06990.1	20706207
AT3G19590.1	Os02t0829900-01	AT2G22640.1	25262777
AT3G19590.1	Os06t0687700-01	AT3G11830.1	20706207
AT3G19590.1	Os03t0448600-01	AT3G19590.1	25262777
AT3G19590.1	Os07t0588500-00	AT3G19590.1	25262777
AT3G19590.1	Os04t0551800-01	AT3G20050.1	20706207
AT3G19590.1	Os04t0486500-01	AT3G25980.1	25262777
AT3G19590.1	Os09t0553100-00	AT3G53730.1	20706207
AT3G19590.1	Os01t0876500-01	AT4G10110.1	20706207
AT3G19590.1	Os05t0427300-03	AT4G10110.1	20706207
AT3G19590.1	Os11t0128700-00	AT5G05510.1	25262777
AT3G19590.1	Os12t0125300-01	AT5G05510.1	25262777
AT3G19590.1	Os02t0247200-01	AT5G26360.1	20706207
AT3G19590.1	Os06t0538000-01	AT5G26360.1	20706207
AT3G19590.1	Os02t0126300-01	AT5G51600.1	20706207
AT3G19590.1	Os05t0552900-01	AT5G51600.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g107160.2.1	Tomato	nucleus	66.21	70.88
VIT_03s0091g00710.t01	Wine grape	cytosol	65.38	70.62
PGSC0003DMT400066160	Potato	extracellular	65.93	70.59
Os03t0448600-01	Rice	cytosol	65.38	69.39
KRH35682	Soybean	nucleus	64.56	69.12
KRG91104	Soybean	nucleus	64.56	68.31
KRG91092	Soybean	nucleus	63.74	68.24
CDY59371	Canola	cytosol, plastid	62.91	67.55
TraesCS2A01G194000.1	Wheat	cytosol	64.01	67.34
TraesCS2D01G193800.1	Wheat	cytosol	63.19	67.25
AT1G49910.1	Thale cress	cytosol	62.36	66.96
Bra014226.1-P	Field mustard	cytosol, plastid	62.36	66.96
CDY42193	Canola	cytosol, plastid	61.54	65.88
CDY03579	Canola	cytosol, plastid	61.54	65.88
CDX95434	Canola	cytosol, plastid	61.54	65.88
Bra038220.1-P	Field mustard	cytosol, plastid	61.54	65.88
TraesCS2B01G212800.1	Wheat	cytosol	62.36	65.42
AT3G19590.1	Thale cress	cytosol	60.71	65.0
KRH35672	Soybean	cytosol	20.05	55.73
Os01t0635400-01	Rice	cytosol, plastid	31.59	33.43
Os08t0176800-01	Rice	plastid	31.04	33.04
GSMUA_Achr4P03390_001	Banana	extracellular	38.19	32.86
Os03t0758700-01	Rice	endoplasmic reticulum, plasma membrane	22.8	28.23
Os07t0588600-01	Rice	nucleus	13.19	21.82
Os07t0588700-00	Rice	cytosol	9.34	15.04

Protein Annotations

MapMan:13.3.5.5.2	Gene3D:2.130.10.10	EntrezGene:9267070	ProteinID:BAC57743.1	ProteinID:BAH94009.1	ProteinID:BAT02416.1
GO:GO:0000776	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0007049	GO:GO:0007094	GO:GO:0008150
GO:GO:0009524	GO:GO:0009987	GO:GO:0016043	GO:GO:0033597	GO:GO:0043130	GO:GO:1990298
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	EnsemblPlantsGene:Os07g0588500	EnsemblPlants:Os07t0588500-00	PFAM:PF00400
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR10971	PANTHER:PTHR10971:SF24	UniProt:Q84Z17	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI000000468D	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
RefSeq:XP_015647196.1	SEG:seg	:	:	:	:

Description

OsWD40-145WD40 repeat-like domain containing protein. (Os07t0588500-00)

Coordinates

chr7:+:23965804..23970059

Molecular Weight (calculated)

39911.7 Da

IEP (calculated)

8.021

GRAVY (calculated)

-0.374

Length

364 amino acids

Sequence
(BLAST)

001: MSTAPTGDPP VRVAVASGGG GMGLGKELRE PPSDGVSSLR FSKHSDRLLV SSWDKTVRLY DAEANVPRGV FMHAASVLGC CFHDDSSGFS ASADNTVRRL
101: AFSSGGNYFL VRHDAAVSCV EYSYSTGQVI TGSWDKTIMC WDPRGVNGTS HHTLVGTHNQ PERVYSLSVS GYNLVVATAG RHVNVYDLRS MSRPEQQRES
201: PLRYQTRCVQ CYPNGTGFAL GSVEGRVAME FYDQSESAPY KKYSFKCHRV PEDGETKVYP VNAISFHPVH GTFATGGCDR FVNLWDGANR RKLFQFPRYP
301: SSIAALSFSR DGRLLAVASS YTYEEGDIPH PPDAIFIRDV NEVQVKPRPK ITFTDPPSVA SPSV

Best Arabidopsis Sequence Match ( AT1G49910.1 )
(BLAST)

001: MTLVPAIGRE LSNPPSDGIS NLRFSNNSDH LLVSSWDKSV RLYDANGDLM RGEFKHGGAV LDCCFHDDSS GFSVCADTKV RRIDFNAGKE DVLGTHEKPV
101: RCVEYSYAAG QVITGSWDKT IKCWDPRGAS GTERTQIGTY MQPERVNSLS LVGNRLVVAT AGRHVNIYDL RNMSQPEQRR ESSLKYQTRC VRCYPNGTGY
201: ALSSVEGRVS MEFFDLSEAA QAKKYAFKCH RKSEDGRDIV YPVNAIAFHP IYGTFASGGC DGFVNIWDGN NKKRLYQYSK YPTSIAALSF SRDGGLLAVA
301: SSYTFEEGDK PHEPDAIFVR SVNEIEVKPK PKVYPNPPV

Arabidopsis Description

BUB3.2BUB3.2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7L6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.