Factsheet for Os03t0758700-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
BAC19900
Os01t0848200-02
Os02t0247200-01
Os02t0325100-01
Os03t0628900-01
Os04t0551800-01
Os04t0653000-01
Os05t0163250-01
Os05t0455500-02
Os06t0167000-02
Os06t0538000-01
Os06t0687700-01
Os07t0615800-00
Os09t0133600-01
Os09t0421200-01
Os10t0577000-02
Os11t0217300-01
Os12t0422971-00
Os12t0562900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69400.1	Os03t0628900-01	AT1G08780.1	20706207
AT1G69400.1	Os10t0577000-02	AT1G65020.1	20706207
AT1G69400.1	Os11t0217300-01	AT2G05830.1	20706207
AT1G69400.1	Os01t0848200-02	AT2G39800.1	20706207
AT1G69400.1	Os05t0455500-02	AT2G39800.1	20706207
AT1G69400.1	Os09t0421200-01	AT3G10180.1	20706207
AT1G69400.1	Os06t0687700-01	AT3G11830.1	20706207
AT1G69400.1	Os07t0615800-00	AT3G16980.1	20706207
AT1G69400.1	Os04t0551800-01	AT3G20050.1	20706207
AT1G69400.1	Os09t0133600-01	AT4G04020.1	20706207
AT1G69400.1	Os05t0163250-01	AT4G38780.1	20706207
AT1G69400.1	Os06t0167000-02	AT4G38780.1	20706207
AT1G69400.1	Os04t0653000-01	AT5G20900.1	20706207
AT1G69400.1	Os02t0247200-01	AT5G26360.1	20706207
AT1G69400.1	Os06t0538000-01	AT5G26360.1	20706207
AT1G69400.1	Os12t0562900-01	AT5G49510.1	20706207
AT1G69400.1	Os02t0325100-01	AT5G58290.1	20706207
AT1G69400.1	BAC19900	ATMG00070.1	20706207
AT1G69400.1	Os12t0422971-00	ATMG00070.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G096830.5	Barley	mitochondrion	48.98	44.72
TraesCS5D01G406300.1	Wheat	mitochondrion	48.98	44.72
TraesCS5A01G396600.1	Wheat	mitochondrion	48.64	44.41
TraesCS5B01G401600.1	Wheat	mitochondrion	47.96	43.79
Zm00001d034081_P002	Maize	cytosol, mitochondrion	44.56	43.52
OQU90950	Sorghum	mitochondrion	46.94	42.72
GSMUA_Achr9P09460_001	Banana	cytosol	36.39	33.02
CDY44065	Canola	cytosol	32.31	30.16
CDY28548	Canola	cytosol	31.97	29.84
KRH70829	Soybean	cytosol	32.65	29.09
KRH74957	Soybean	cytosol	32.65	29.09
AT1G69400.1	Thale cress	cytosol	29.25	27.39
VIT_01s0113g00430.t01	Wine grape	cytosol	29.93	26.91
Bra038307.1-P	Field mustard	plastid	31.97	24.87
PGSC0003DMT400072830	Potato	cytosol	27.21	24.62
Solyc05g012720.2.1	Tomato	nucleus	22.79	24.1
Os03t0448600-01	Rice	cytosol	27.89	23.91
Os07t0588500-00	Rice	cytosol	28.23	22.8
Os01t0635400-01	Rice	cytosol, plastid	22.11	18.9
Os08t0176800-01	Rice	plastid	21.77	18.71
Os07t0588600-01	Rice	nucleus	8.5	11.36
Os07t0588700-00	Rice	cytosol	6.8	8.85

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	ProteinID:ABF98983.1	ProteinID:BAS86486.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003746	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006412
GO:GO:0006452	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0019538	GO:GO:0043022	GO:GO:0045901
GO:GO:0045905	InterPro:IPR015943	EnsemblPlantsGene:Os03g0758700	EnsemblPlants:Os03t0758700-01	PANTHER:PTHR10971	PANTHER:PTHR10971:SF17
UniProt:Q10CJ9	SUPFAM:SSF50978	TMHMM:TMhelix	UniParc:UPI0000DB4ED0	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat_dom_sf

Description

WD40 repeat domain containing protein. (Os03t0758700-01)

Coordinates

chr3:+:31382291..31387189

Molecular Weight (calculated)

33849.4 Da

IEP (calculated)

6.430

GRAVY (calculated)

0.011

Length

294 amino acids

Sequence
(BLAST)

001: MDSCNNYLFS EFFLFFASNL FSEFHNRNDN LYLLICVYCC VVFLSGQVVT ATLDKKLMFW DSQTRNVNPN SIKNLDSDVA SLSVCEMYIL AAIEREVYIY
101: DMRNLIGPVK VKDSPVEYHL RSLHSSPEWK GYAAGSVDGV VAVKYFDRGT DGDMGYVFRC HPKSRDGRSS MVPINSIGIH PLYVLYFFFV HLPAVLFLKV
201: IFFFETNLKV MWTHWFLIGS DKTFVTGDNE GYVIAWDAQS KKKLHEFPIY SGSVASIAFN HNGQIFAVAS NSNYQESDKM VEEHQIFFEM KQHF

Best Arabidopsis Sequence Match ( AT1G69400.1 )
(BLAST)

001: MSGDRLEFEN PIEDAVSRLR FSPQSNNLLV ASWDSYLRLY DVESSSLSLE LNSQAALLDC CFENESTSFT SGSDGFIRRY DLNAGTVDTI GRHDDISTSI
101: VYSYEKGEVI STGFDEKIKF WDTRQRESLV FSTDAGGAVG CVTVSGNNLV VCVDASMHIY DLRNLDEAFQ SYASQVEVPI RCITSVPYSR GYAVGSVDGR
201: VAVDFPNTSC SSEIKYSFRC HPKSRNGRLD GVCINAIEFS PCGSGTFVTG DNEGYVISWN AKSRRRLNEL PRYSNSIASL AFDHTGELLA IASSHTYQDA
301: KEKEEAPQVF IHRL

Arabidopsis Description

BUB3.3Mitotic checkpoint protein BUB3.3 [Source:UniProtKB/Swiss-Prot;Acc:F4I241]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.